RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 ROBO2Q9HCK4 1378 aa5.75□□□□□ -1.49
DENND4A-205ENST00000562540 BMP8BP34820 402 aa5.74□□□□□ -1.49
DENND4A-205ENST00000562540 CCNFP41002 786 aa5.74□□□□□ -1.49
DENND4A-205ENST00000562540 PLEKHN1Q494U1 663 aaPredicted RBP5.74□□□□□ -1.49
DENND4A-205ENST00000562540 FBXL19Q6PCT2 694 aa5.74□□□□□ -1.49
DENND4A-205ENST00000562540 NLRC3Q7RTR2 1065 aa5.74□□□□□ -1.49
DENND4A-205ENST00000562540 TP53I13Q8NBR0 393 aaPredicted RBP5.74□□□□□ -1.49
DENND4A-205ENST00000562540 ATG4CQ96DT6 458 aa5.74□□□□□ -1.49
DENND4A-205ENST00000562540 EAF1Q96JC9 268 aaPredicted RBP5.74□□□□□ -1.49
DENND4A-205ENST00000562540 TRAIPQ9BWF2 469 aa5.74□□□□□ -1.49
DENND4A-205ENST00000562540 FBXL21Q9UKT6 434 aa5.74□□□□□ -1.49
DENND4A-205ENST00000562540 PCDHB12Q9Y5F1 795 aa5.74□□□□□ -1.49
DENND4A-205ENST00000562540 PRICKLE3O43900 615 aaPredicted RBP5.73□□□□□ -1.49
DENND4A-205ENST00000562540 PFKLP17858 780 aa5.73□□□□□ -1.49
DENND4A-205ENST00000562540 ITGAEP38570 1179 aa5.73□□□□□ -1.49
DENND4A-205ENST00000562540 CTSKP43235 329 aa5.73□□□□□ -1.49
DENND4A-205ENST00000562540 LIMS1P48059 325 aa5.73□□□□□ -1.49
DENND4A-205ENST00000562540 ZNF200P98182 395 aaPredicted RBP5.73□□□□□ -1.49
DENND4A-205ENST00000562540 CBX2Q14781 532 aaPredicted RBP5.73□□□□□ -1.49
DENND4A-205ENST00000562540 RTP5Q14D33 572 aa5.73□□□□□ -1.49
DENND4A-205ENST00000562540 ZC3H14Q6PJT7 736 aaKnown RBP5.73□□□□□ -1.49
DENND4A-205ENST00000562540 CRTC3Q6UUV7 619 aa5.73□□□□□ -1.49
DENND4A-205ENST00000562540 FBXO33Q7Z6M2 555 aa5.73□□□□□ -1.49
DENND4A-205ENST00000562540 AEBP1Q8IUX7 1158 aa5.73□□□□□ -1.49
DENND4A-205ENST00000562540 NLGN1Q8N2Q7 840 aa5.73□□□□□ -1.49
DENND4A-205ENST00000562540 NAT16Q8N8M0 369 aa5.73□□□□□ -1.49
DENND4A-205ENST00000562540 JMJD8Q96S16 334 aa5.73□□□□□ -1.49
DENND4A-205ENST00000562540 COPRSQ9NQ92 184 aa5.73□□□□□ -1.49
DENND4A-205ENST00000562540 AP5S1Q9NUS5 200 aa5.73□□□□□ -1.49
DENND4A-205ENST00000562540 A0A1W2PQ27 194 aa5.72□□□□□ -1.49
DENND4A-205ENST00000562540 A0A1W2PQ64 194 aa5.72□□□□□ -1.49
DENND4A-205ENST00000562540 A0A1W2PQC6 194 aa5.72□□□□□ -1.49
DENND4A-205ENST00000562540 A0A1W2PQD8 194 aa5.72□□□□□ -1.49
DENND4A-205ENST00000562540 OVOL3O00110 214 aa5.72□□□□□ -1.49
DENND4A-205ENST00000562540 VAV1P15498 845 aa5.72□□□□□ -1.49
DENND4A-205ENST00000562540 EIF4A3P38919 411 aaKnown RBP5.72□□□□□ -1.49
DENND4A-205ENST00000562540 KCNC1P48547 511 aa5.72□□□□□ -1.49
DENND4A-205ENST00000562540 MAPKAPK2P49137 400 aa5.72□□□□□ -1.49
DENND4A-205ENST00000562540 NR1I3Q14994 352 aa5.72□□□□□ -1.49
DENND4A-205ENST00000562540 ERMP1Q7Z2K6 904 aa5.72□□□□□ -1.49
DENND4A-205ENST00000562540 TMEM192Q8IY95 271 aa5.72□□□□□ -1.49
DENND4A-205ENST00000562540 SLC6A18Q96N87 628 aa5.72□□□□□ -1.49
DENND4A-205ENST00000562540 GPR20Q99678 358 aa5.72□□□□□ -1.49
DENND4A-205ENST00000562540 EHMT1Q9H9B1 1298 aa5.72□□□□□ -1.49
DENND4A-205ENST00000562540 KCNQ5Q9NR82 932 aa5.72□□□□□ -1.49
DENND4A-205ENST00000562540 FFAR3O14843 346 aa5.71□□□□□ -1.5
DENND4A-205ENST00000562540 GREM1O60565 184 aa5.71□□□□□ -1.5
DENND4A-205ENST00000562540 TNFRSF1AP19438 455 aa5.71□□□□□ -1.5
DENND4A-205ENST00000562540 IGFBP6P24592 240 aaPredicted RBP5.71□□□□□ -1.5
DENND4A-205ENST00000562540 CRKP46108 304 aa5.71□□□□□ -1.5
DENND4A-205ENST00000562540 CEBPAP49715 358 aaPredicted RBP5.71□□□□□ -1.5
DENND4A-205ENST00000562540 ZXDAP98168 799 aa5.71□□□□□ -1.5
DENND4A-205ENST00000562540 DNAJC14Q6Y2X3 702 aaPredicted RBP5.71□□□□□ -1.5
DENND4A-205ENST00000562540 GK5Q6ZS86 529 aa5.71□□□□□ -1.5
DENND4A-205ENST00000562540 DSCC1Q9BVC3 393 aa5.71□□□□□ -1.5
DENND4A-205ENST00000562540 GSNP06396 782 aa5.7□□□□□ -1.5
DENND4A-205ENST00000562540 NME1P15531 152 aaKnown RBP5.7□□□□□ -1.5
DENND4A-205ENST00000562540 SLURP1P55000 103 aa5.7□□□□□ -1.5
DENND4A-205ENST00000562540 CAP1Q01518 475 aa5.7□□□□□ -1.5
DENND4A-205ENST00000562540 CLCQ05315 142 aa5.7□□□□□ -1.5
DENND4A-205ENST00000562540 AUHQ13825 339 aaKnown RBP5.7□□□□□ -1.5
DENND4A-205ENST00000562540 SEZ6Q53EL9 994 aa5.7□□□□□ -1.5
DENND4A-205ENST00000562540 JAMLQ86YT9 394 aa5.7□□□□□ -1.5
DENND4A-205ENST00000562540 PRR13Q9NZ81 148 aa5.7□□□□□ -1.5
DENND4A-205ENST00000562540 IRS2Q9Y4H2 1338 aa5.7□□□□□ -1.5
DENND4A-205ENST00000562540 GSTM1P09488 218 aa5.69□□□□□ -1.5
DENND4A-205ENST00000562540 MSL3P1P0C860 447 aa5.69□□□□□ -1.5
DENND4A-205ENST00000562540 MCM4P33991 863 aa5.69□□□□□ -1.5
DENND4A-205ENST00000562540 TAGLNQ01995 201 aaKnown RBP5.69□□□□□ -1.5
DENND4A-205ENST00000562540 MVKQ03426 396 aa5.69□□□□□ -1.5
DENND4A-205ENST00000562540 TARBP2Q15633 366 aaKnown RBP5.69□□□□□ -1.5
DENND4A-205ENST00000562540 LRRFIP1Q32MZ4 808 aaKnown RBP5.69□□□□□ -1.5
DENND4A-205ENST00000562540 RTP2Q5QGT7 225 aa5.69□□□□□ -1.5
DENND4A-205ENST00000562540 TMEM52Q8NDY8 209 aa5.69□□□□□ -1.5
DENND4A-205ENST00000562540 ZNF296Q8WUU4 475 aaPredicted RBP5.69□□□□□ -1.5
DENND4A-205ENST00000562540 ANTXR1Q9H6X2 564 aa5.69□□□□□ -1.5
DENND4A-205ENST00000562540 USP40Q9NVE5 1235 aa5.69□□□□□ -1.5
DENND4A-205ENST00000562540 UBP1Q9NZI7 540 aa5.69□□□□□ -1.5
DENND4A-205ENST00000562540 A0A1W2PQJ5 194 aa5.68□□□□□ -1.5
DENND4A-205ENST00000562540 TNFRSF10CO14798 259 aa5.68□□□□□ -1.5
DENND4A-205ENST00000562540 ZNF165P49910 485 aa5.68□□□□□ -1.5
DENND4A-205ENST00000562540 APOBRQ0VD83 1088 aa5.68□□□□□ -1.5
DENND4A-205ENST00000562540 HLA-DQA1Q5Y7H0 255 aa5.68□□□□□ -1.5
DENND4A-205ENST00000562540 CWF19L1Q69YN2 538 aaKnown RBP5.68□□□□□ -1.5
DENND4A-205ENST00000562540 PAQR3Q6TCH7 311 aa5.68□□□□□ -1.5
DENND4A-205ENST00000562540 LSRQ86X29 649 aaPredicted RBP5.68□□□□□ -1.5
DENND4A-205ENST00000562540 REXO1Q8N1G1 1221 aaKnown RBP5.68□□□□□ -1.5
DENND4A-205ENST00000562540 SUSD2Q9UGT4 822 aa5.68□□□□□ -1.5
DENND4A-205ENST00000562540 MEIS3P2A8K0S8 358 aa5.67□□□□□ -1.5
DENND4A-205ENST00000562540 SRGAP3O43295 1099 aa5.67□□□□□ -1.5
DENND4A-205ENST00000562540 CYBBP04839 570 aa5.67□□□□□ -1.5
DENND4A-205ENST00000562540 DBHP09172 617 aa5.67□□□□□ -1.5
DENND4A-205ENST00000562540 VWA3BQ502W6 1294 aa5.67□□□□□ -1.5
DENND4A-205ENST00000562540 UBXN11Q5T124 520 aa5.67□□□□□ -1.5
DENND4A-205ENST00000562540 BICRALQ6AI39 1079 aa5.67□□□□□ -1.5
DENND4A-205ENST00000562540 LIPIQ6XZB0 460 aa5.67□□□□□ -1.5
DENND4A-205ENST00000562540 C7orf61Q8IZ16 206 aa5.67□□□□□ -1.5
DENND4A-205ENST00000562540 ADGRG2Q8IZP9 1017 aa5.67□□□□□ -1.5
DENND4A-205ENST00000562540 SLC9A7Q96T83 725 aa5.67□□□□□ -1.5
DENND4A-205ENST00000562540 SPATA25Q9BR10 227 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms