RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 ME1P48163 572 aa16.35■□□□□ 0.21
COMMD4-205ENST00000562310 ZYXQ15942 572 aaKnown RBP16.35■□□□□ 0.21
COMMD4-205ENST00000562310 KIAA1755Q5JYT7 1200 aa16.35■□□□□ 0.21
COMMD4-205ENST00000562310 MCTP2Q6DN12 878 aa16.35■□□□□ 0.21
COMMD4-205ENST00000562310 CCDC84Q86UT8 332 aaPredicted RBP16.35■□□□□ 0.21
COMMD4-205ENST00000562310 REXO1Q8N1G1 1221 aaKnown RBP16.35■□□□□ 0.21
COMMD4-205ENST00000562310 CUL5Q93034 780 aa16.35■□□□□ 0.21
COMMD4-205ENST00000562310 ZKSCAN4Q969J2 545 aaPredicted RBP16.35■□□□□ 0.21
COMMD4-205ENST00000562310 C12orf42Q96LP6 360 aa16.35■□□□□ 0.21
COMMD4-205ENST00000562310 RIC8AQ9NPQ8 531 aa16.35■□□□□ 0.21
COMMD4-205ENST00000562310 PRR12Q9ULL5 1215 aa16.35■□□□□ 0.21
COMMD4-205ENST00000562310 PTPRFP10586 1907 aa16.35■□□□□ 0.21
COMMD4-205ENST00000562310 UTRNP46939 3433 aa16.34■□□□□ 0.21
COMMD4-205ENST00000562310 LOC285556D6RIA3 1793 aa16.34■□□□□ 0.21
COMMD4-205ENST00000562310 RBBP6Q7Z6E9 1792 aaKnown RBP16.34■□□□□ 0.21
COMMD4-205ENST00000562310 A0A1W2PQ27 194 aa16.34■□□□□ 0.21
COMMD4-205ENST00000562310 A0A1W2PQ64 194 aa16.34■□□□□ 0.21
COMMD4-205ENST00000562310 A0A1W2PQD8 194 aa16.34■□□□□ 0.21
COMMD4-205ENST00000562310 POTECB2RU33 542 aa16.34■□□□□ 0.21
COMMD4-205ENST00000562310 PPP1R11O60927 126 aaPredicted RBP16.34■□□□□ 0.21
COMMD4-205ENST00000562310 TOB1P50616 345 aaPredicted RBP16.34■□□□□ 0.21
COMMD4-205ENST00000562310 MRPL12P52815 198 aaKnown RBP16.34■□□□□ 0.21
COMMD4-205ENST00000562310 BACE1P56817 501 aa16.34■□□□□ 0.21
COMMD4-205ENST00000562310 MTMR2Q13614 643 aa16.34■□□□□ 0.21
COMMD4-205ENST00000562310 PTPAQ15257 358 aa16.34■□□□□ 0.21
COMMD4-205ENST00000562310 FBXO11Q86XK2 927 aa16.34■□□□□ 0.21
COMMD4-205ENST00000562310 RANBP17Q9H2T7 1088 aaKnown RBP16.34■□□□□ 0.21
COMMD4-205ENST00000562310 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.34■□□□□ 0.21
COMMD4-205ENST00000562310 PNMA2Q9UL42 364 aa16.34■□□□□ 0.21
COMMD4-205ENST00000562310 PCDHA6Q9UN73 950 aa16.34■□□□□ 0.21
COMMD4-205ENST00000562310 PCDHA8Q9Y5H6 950 aa16.34■□□□□ 0.21
COMMD4-205ENST00000562310 FDX1P10109 184 aa16.33■□□□□ 0.2
COMMD4-205ENST00000562310 SPP2Q13103 211 aa16.33■□□□□ 0.2
COMMD4-205ENST00000562310 ORC2Q13416 577 aaPredicted RBP16.33■□□□□ 0.2
COMMD4-205ENST00000562310 MAP3K11Q16584 847 aa16.33■□□□□ 0.2
COMMD4-205ENST00000562310 TTC38Q5R3I4 469 aa16.33■□□□□ 0.2
COMMD4-205ENST00000562310 ADALQ6DHV7 355 aa16.33■□□□□ 0.2
COMMD4-205ENST00000562310 CAVIN1Q6NZI2 390 aaKnown RBP16.33■□□□□ 0.2
COMMD4-205ENST00000562310 PIK3AP1Q6ZUJ8 805 aa16.33■□□□□ 0.2
COMMD4-205ENST00000562310 RBM46Q8TBY0 533 aaKnown RBP16.33■□□□□ 0.2
COMMD4-205ENST00000562310 COA7Q96BR5 231 aa16.33■□□□□ 0.2
COMMD4-205ENST00000562310 PGBD1Q96JS3 809 aa16.33■□□□□ 0.2
COMMD4-205ENST00000562310 SLF1Q9BQI6 1058 aa16.33■□□□□ 0.2
COMMD4-205ENST00000562310 PCDHA1Q9Y5I3 950 aa16.33■□□□□ 0.2
COMMD4-205ENST00000562310 SNCAIPQ9Y6H5 919 aa16.33■□□□□ 0.2
COMMD4-205ENST00000562310 VCAM1P19320 739 aa16.32■□□□□ 0.2
COMMD4-205ENST00000562310 VGLL4Q14135 290 aa16.32■□□□□ 0.2
COMMD4-205ENST00000562310 NONOQ15233 471 aaKnown RBP eCLIP16.32■□□□□ 0.2
COMMD4-205ENST00000562310 CCDC73Q6ZRK6 1079 aa16.32■□□□□ 0.2
COMMD4-205ENST00000562310 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.32■□□□□ 0.2
COMMD4-205ENST00000562310 ARMC9Q7Z3E5 817 aa16.32■□□□□ 0.2
COMMD4-205ENST00000562310 ANKRD13AQ8IZ07 590 aa16.32■□□□□ 0.2
COMMD4-205ENST00000562310 TMOD4Q9NZQ9 345 aa16.32■□□□□ 0.2
COMMD4-205ENST00000562310 PCDHA7Q9UN72 937 aa16.32■□□□□ 0.2
COMMD4-205ENST00000562310 ZHX2Q9Y6X8 837 aa16.32■□□□□ 0.2
COMMD4-205ENST00000562310 FAM205CA6NFA0 338 aa16.31■□□□□ 0.2
COMMD4-205ENST00000562310 UNCXA6NJT0 531 aa16.31■□□□□ 0.2
COMMD4-205ENST00000562310 CUTAO60888 179 aa16.31■□□□□ 0.2
COMMD4-205ENST00000562310 EARS2Q5JPH6 523 aaKnown RBP16.31■□□□□ 0.2
COMMD4-205ENST00000562310 CCDC183Q5T5S1 534 aa16.31■□□□□ 0.2
COMMD4-205ENST00000562310 KRI1Q8N9T8 703 aaKnown RBP16.31■□□□□ 0.2
COMMD4-205ENST00000562310 PRPF38AQ8NAV1 312 aaKnown RBP16.31■□□□□ 0.2
COMMD4-205ENST00000562310 MRPS27Q92552 414 aaKnown RBP16.31■□□□□ 0.2
COMMD4-205ENST00000562310 KIFC2Q96AC6 838 aa16.31■□□□□ 0.2
COMMD4-205ENST00000562310 TANGO6Q9C0B7 1094 aa16.31■□□□□ 0.2
COMMD4-205ENST00000562310 PSTPIP2Q9H939 334 aa16.31■□□□□ 0.2
COMMD4-205ENST00000562310 EMILIN3Q9NT22 766 aa16.31■□□□□ 0.2
COMMD4-205ENST00000562310 DDX19AQ9NUU7 478 aaKnown RBP16.31■□□□□ 0.2
COMMD4-205ENST00000562310 CLEC11AQ9Y240 323 aa16.31■□□□□ 0.2
COMMD4-205ENST00000562310 PCDHB6Q9Y5E3 794 aa16.31■□□□□ 0.2
COMMD4-205ENST00000562310 ABCB11O95342 1321 aa16.3■□□□□ 0.2
COMMD4-205ENST00000562310 AP3B2Q13367 1082 aa16.3■□□□□ 0.2
COMMD4-205ENST00000562310 PRKG1Q13976 671 aa16.3■□□□□ 0.2
COMMD4-205ENST00000562310 TTLL12Q14166 644 aaPredicted RBP16.3■□□□□ 0.2
COMMD4-205ENST00000562310 SH3D19Q5HYK7 790 aa16.3■□□□□ 0.2
COMMD4-205ENST00000562310 LDHDQ86WU2 507 aa16.3■□□□□ 0.2
COMMD4-205ENST00000562310 RASGRP4Q8TDF6 673 aa16.3■□□□□ 0.2
COMMD4-205ENST00000562310 RPAP3Q9H6T3 665 aaPredicted RBP16.3■□□□□ 0.2
COMMD4-205ENST00000562310 FZD1Q9UP38 647 aa16.3■□□□□ 0.2
COMMD4-205ENST00000562310 AFG3L2Q9Y4W6 797 aa16.3■□□□□ 0.2
COMMD4-205ENST00000562310 RLFQ13129 1914 aa16.29■□□□□ 0.2
COMMD4-205ENST00000562310 MYPNQ86TC9 1320 aa16.29■□□□□ 0.2
COMMD4-205ENST00000562310 LETM1O95202 739 aaPredicted RBP16.29■□□□□ 0.2
COMMD4-205ENST00000562310 ATP2B1P20020 1258 aa16.29■□□□□ 0.2
COMMD4-205ENST00000562310 CLK2P49760 499 aaKnown RBP16.29■□□□□ 0.2
COMMD4-205ENST00000562310 PPATQ06203 517 aa16.29■□□□□ 0.2
COMMD4-205ENST00000562310 NEK8Q86SG6 692 aa16.29■□□□□ 0.2
COMMD4-205ENST00000562310 ERO1BQ86YB8 467 aa16.29■□□□□ 0.2
COMMD4-205ENST00000562310 CCAR1Q8IX12 1150 aaKnown RBP16.29■□□□□ 0.2
COMMD4-205ENST00000562310 FSIP1Q8NA03 581 aa16.29■□□□□ 0.2
COMMD4-205ENST00000562310 FERMT2Q96AC1 680 aa16.29■□□□□ 0.2
COMMD4-205ENST00000562310 NAP1L4Q99733 375 aaKnown RBP16.29■□□□□ 0.2
COMMD4-205ENST00000562310 GZF1Q9H116 711 aaPredicted RBP16.29■□□□□ 0.2
COMMD4-205ENST00000562310 TMEM63CQ9P1W3 806 aa16.29■□□□□ 0.2
COMMD4-205ENST00000562310 PPP1R9AQ9ULJ8 1098 aa16.29■□□□□ 0.2
COMMD4-205ENST00000562310 CEP350Q5VT06 3117 aa16.28■□□□□ 0.2
COMMD4-205ENST00000562310 SPDYE5A6NIY4 337 aa16.28■□□□□ 0.2
COMMD4-205ENST00000562310 LAD1O00515 517 aa16.28■□□□□ 0.2
COMMD4-205ENST00000562310 ADAMTS3O15072 1205 aa16.28■□□□□ 0.2
COMMD4-205ENST00000562310 FLOT1O75955 427 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms