RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 GMCL1Q96IK5 515 aa19.84■□□□□ 0.77
VPS9D1-AS1-201ENST00000562298 INCENPQ9NQS7 918 aa19.84■□□□□ 0.77
VPS9D1-AS1-201ENST00000562298 HOMER2Q9NSB8 354 aa19.84■□□□□ 0.77
VPS9D1-AS1-201ENST00000562298 ZNF536O15090 1300 aa19.83■□□□□ 0.77
VPS9D1-AS1-201ENST00000562298 MCM3APO60318 1980 aa19.83■□□□□ 0.77
VPS9D1-AS1-201ENST00000562298 EPHB4P54760 987 aa19.83■□□□□ 0.77
VPS9D1-AS1-201ENST00000562298 RRP1P56182 461 aaKnown RBP19.83■□□□□ 0.77
VPS9D1-AS1-201ENST00000562298 CTDSPL2Q05D32 466 aa19.83■□□□□ 0.77
VPS9D1-AS1-201ENST00000562298 FAAP100Q0VG06 881 aa19.83■□□□□ 0.77
VPS9D1-AS1-201ENST00000562298 KCNA10Q16322 511 aa19.83■□□□□ 0.77
VPS9D1-AS1-201ENST00000562298 VPS53Q5VIR6 699 aa19.83■□□□□ 0.77
VPS9D1-AS1-201ENST00000562298 ARMCX2Q7L311 632 aa19.83■□□□□ 0.77
VPS9D1-AS1-201ENST00000562298 ANKRD33Q7Z3H0 272 aa19.83■□□□□ 0.77
VPS9D1-AS1-201ENST00000562298 KATNBL1Q9H079 304 aa19.83■□□□□ 0.77
VPS9D1-AS1-201ENST00000562298 STARD7Q9NQZ5 370 aa19.83■□□□□ 0.77
VPS9D1-AS1-201ENST00000562298 IL17RBQ9NRM6 502 aa19.83■□□□□ 0.77
VPS9D1-AS1-201ENST00000562298 VCANP13611 3396 aa19.82■□□□□ 0.76
VPS9D1-AS1-201ENST00000562298 MOXD2PA6NHM9 499 aa19.82■□□□□ 0.76
VPS9D1-AS1-201ENST00000562298 NMT2O60551 498 aa19.82■□□□□ 0.76
VPS9D1-AS1-201ENST00000562298 FDX1P10109 184 aa19.82■□□□□ 0.76
VPS9D1-AS1-201ENST00000562298 MCCP23508 829 aa19.82■□□□□ 0.76
VPS9D1-AS1-201ENST00000562298 CST5P28325 142 aaPredicted RBP19.82■□□□□ 0.76
VPS9D1-AS1-201ENST00000562298 CNTN2Q02246 1040 aa19.82■□□□□ 0.76
VPS9D1-AS1-201ENST00000562298 CCDC144BQ3MJ40 725 aa19.82■□□□□ 0.76
VPS9D1-AS1-201ENST00000562298 ZNF697Q5TEC3 545 aa19.82■□□□□ 0.76
VPS9D1-AS1-201ENST00000562298 RASGRP2Q7LDG7 609 aa19.82■□□□□ 0.76
VPS9D1-AS1-201ENST00000562298 CCDC144CPQ8IYA2 1237 aa19.82■□□□□ 0.76
VPS9D1-AS1-201ENST00000562298 NUP133Q8WUM0 1156 aa19.82■□□□□ 0.76
VPS9D1-AS1-201ENST00000562298 AGBL1Q96MI9 1066 aa19.82■□□□□ 0.76
VPS9D1-AS1-201ENST00000562298 ABHD16BQ9H3Z7 469 aa19.82■□□□□ 0.76
VPS9D1-AS1-201ENST00000562298 ISY1Q9ULR0 285 aaKnown RBP19.82■□□□□ 0.76
VPS9D1-AS1-201ENST00000562298 STX8Q9UNK0 236 aa19.82■□□□□ 0.76
VPS9D1-AS1-201ENST00000562298 TSPY2A6NKD2 308 aa19.81■□□□□ 0.76
VPS9D1-AS1-201ENST00000562298 RAG1P15918 1043 aa19.81■□□□□ 0.76
VPS9D1-AS1-201ENST00000562298 SLC1A4P43007 532 aa19.81■□□□□ 0.76
VPS9D1-AS1-201ENST00000562298 FAM160B2Q86V87 743 aa19.81■□□□□ 0.76
VPS9D1-AS1-201ENST00000562298 FAM133AQ8N9E0 248 aa19.81■□□□□ 0.76
VPS9D1-AS1-201ENST00000562298 STAG1Q8WVM7 1258 aa19.81■□□□□ 0.76
VPS9D1-AS1-201ENST00000562298 TOX2Q96NM4 488 aa19.81■□□□□ 0.76
VPS9D1-AS1-201ENST00000562298 ACAD9Q9H845 621 aa19.81■□□□□ 0.76
VPS9D1-AS1-201ENST00000562298 A1CFQ9NQ94 594 aaKnown RBP19.81■□□□□ 0.76
VPS9D1-AS1-201ENST00000562298 TMEM39AQ9NV64 488 aa19.81■□□□□ 0.76
VPS9D1-AS1-201ENST00000562298 LRRC37A2A6NM11 1700 aa19.81■□□□□ 0.76
VPS9D1-AS1-201ENST00000562298 PLA2G6O60733 806 aa19.8■□□□□ 0.76
VPS9D1-AS1-201ENST00000562298 C6orf222P0C671 652 aaPredicted RBP19.8■□□□□ 0.76
VPS9D1-AS1-201ENST00000562298 SMAD3P84022 425 aaKnown RBP19.8■□□□□ 0.76
VPS9D1-AS1-201ENST00000562298 IKQ13123 557 aaPredicted RBP19.8■□□□□ 0.76
VPS9D1-AS1-201ENST00000562298 ANKRD45Q5TZF3 282 aa19.8■□□□□ 0.76
VPS9D1-AS1-201ENST00000562298 KCTD1Q719H9 257 aa19.8■□□□□ 0.76
VPS9D1-AS1-201ENST00000562298 CHURC1Q8WUH1 139 aa19.8■□□□□ 0.76
VPS9D1-AS1-201ENST00000562298 UPF3AQ9H1J1 476 aaKnown RBP19.8■□□□□ 0.76
VPS9D1-AS1-201ENST00000562298 RNF146Q9NTX7 359 aa19.8■□□□□ 0.76
VPS9D1-AS1-201ENST00000562298 SOWAHBA6NEL2 793 aa19.79■□□□□ 0.76
VPS9D1-AS1-201ENST00000562298 CTAGE5O15320 804 aa19.79■□□□□ 0.76
VPS9D1-AS1-201ENST00000562298 ASGR1P07306 291 aa19.79■□□□□ 0.76
VPS9D1-AS1-201ENST00000562298 NOVP48745 357 aa19.79■□□□□ 0.76
VPS9D1-AS1-201ENST00000562298 GJA9P57773 515 aa19.79■□□□□ 0.76
VPS9D1-AS1-201ENST00000562298 SNAP25P60880 206 aa19.79■□□□□ 0.76
VPS9D1-AS1-201ENST00000562298 EVI5LQ96CN4 794 aa19.79■□□□□ 0.76
VPS9D1-AS1-201ENST00000562298 CRBNQ96SW2 442 aa19.79■□□□□ 0.76
VPS9D1-AS1-201ENST00000562298 ANAPC4Q9UJX5 808 aa19.79■□□□□ 0.76
VPS9D1-AS1-201ENST00000562298 ASTN1O14525 1302 aa19.78■□□□□ 0.76
VPS9D1-AS1-201ENST00000562298 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.78■□□□□ 0.76
VPS9D1-AS1-201ENST00000562298 DCDC2CA8MYV0 355 aa19.78■□□□□ 0.76
VPS9D1-AS1-201ENST00000562298 CDK7P50613 346 aa19.78■□□□□ 0.76
VPS9D1-AS1-201ENST00000562298 FPGSQ05932 587 aa19.78■□□□□ 0.76
VPS9D1-AS1-201ENST00000562298 PPP4R3BQ5MIZ7 849 aa19.78■□□□□ 0.76
VPS9D1-AS1-201ENST00000562298 RCSD1Q6JBY9 416 aa19.78■□□□□ 0.76
VPS9D1-AS1-201ENST00000562298 CCDC174Q6PII3 467 aa19.78■□□□□ 0.76
VPS9D1-AS1-201ENST00000562298 RNPC3Q96LT9 517 aaKnown RBP19.78■□□□□ 0.76
VPS9D1-AS1-201ENST00000562298 GLT1D1Q96MS3 346 aa19.78■□□□□ 0.76
VPS9D1-AS1-201ENST00000562298 TTYH1Q9H313 450 aaPredicted RBP19.78■□□□□ 0.76
VPS9D1-AS1-201ENST00000562298 SEMA6BQ9H3T3 888 aa19.78■□□□□ 0.76
VPS9D1-AS1-201ENST00000562298 TBX21Q9UL17 535 aa19.78■□□□□ 0.76
VPS9D1-AS1-201ENST00000562298 PRR12Q9ULL5 1215 aa19.78■□□□□ 0.76
VPS9D1-AS1-201ENST00000562298 DDX49Q9Y6V7 483 aaKnown RBP19.78■□□□□ 0.76
VPS9D1-AS1-201ENST00000562298 ELP1O95163 1332 aa19.77■□□□□ 0.76
VPS9D1-AS1-201ENST00000562298 LCTP09848 1927 aa19.77■□□□□ 0.76
VPS9D1-AS1-201ENST00000562298 RANBP6O60518 1105 aaKnown RBP19.77■□□□□ 0.76
VPS9D1-AS1-201ENST00000562298 FGRP09769 529 aa19.77■□□□□ 0.76
VPS9D1-AS1-201ENST00000562298 ALAS1P13196 640 aa19.77■□□□□ 0.76
VPS9D1-AS1-201ENST00000562298 PDE1AP54750 535 aa19.77■□□□□ 0.76
VPS9D1-AS1-201ENST00000562298 TKFCQ3LXA3 575 aa19.77■□□□□ 0.76
VPS9D1-AS1-201ENST00000562298 MUM1L1Q5H9M0 696 aa19.77■□□□□ 0.76
VPS9D1-AS1-201ENST00000562298 PCSK9Q8NBP7 692 aaKnown RBP19.77■□□□□ 0.76
VPS9D1-AS1-201ENST00000562298 FAM227BQ96M60 508 aa19.77■□□□□ 0.76
VPS9D1-AS1-201ENST00000562298 TRERF1Q96PN7 1200 aa19.77■□□□□ 0.76
VPS9D1-AS1-201ENST00000562298 CDX2Q99626 313 aaPredicted RBP19.77■□□□□ 0.76
VPS9D1-AS1-201ENST00000562298 SPC25Q9HBM1 224 aa19.77■□□□□ 0.76
VPS9D1-AS1-201ENST00000562298 A0A0D9SFI3 127 aa19.76■□□□□ 0.75
VPS9D1-AS1-201ENST00000562298 ORC4O43929 436 aa19.76■□□□□ 0.75
VPS9D1-AS1-201ENST00000562298 NKX3-2P78367 333 aa19.76■□□□□ 0.75
VPS9D1-AS1-201ENST00000562298 ALX1Q15699 326 aa19.76■□□□□ 0.75
VPS9D1-AS1-201ENST00000562298 GNASQ5JWF2 1037 aa19.76■□□□□ 0.75
VPS9D1-AS1-201ENST00000562298 HELLSQ9NRZ9 838 aa19.76■□□□□ 0.75
VPS9D1-AS1-201ENST00000562298 ZBTB47Q9UFB7 747 aaPredicted RBP19.76■□□□□ 0.75
VPS9D1-AS1-201ENST00000562298 MTMR7Q9Y216 660 aa19.76■□□□□ 0.75
VPS9D1-AS1-201ENST00000562298 SPTBN5Q9NRC6 3674 aaKnown RBP19.76■□□□□ 0.75
VPS9D1-AS1-201ENST00000562298 MROH7Q68CQ1 1323 aa19.76■□□□□ 0.75
VPS9D1-AS1-201ENST00000562298 CHD9Q3L8U1 2897 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms