RNA–Protein interactions for RNA: ENST00000561568.5

USB1-204, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 671 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-204ENST00000561568 JMJD4Q9H9V9 463 aa19.02■□□□□ 0.64
USB1-204ENST00000561568 ICAM1P05362 532 aa19.01■□□□□ 0.63
USB1-204ENST00000561568 ERCC3P19447 782 aa19.01■□□□□ 0.63
USB1-204ENST00000561568 RXRAP19793 462 aa19.01■□□□□ 0.63
USB1-204ENST00000561568 PDIA3P30101 505 aaKnown RBP19.01■□□□□ 0.63
USB1-204ENST00000561568 METAP2P50579 478 aaKnown RBP eCLIP19.01■□□□□ 0.63
USB1-204ENST00000561568 PKN2Q16513 984 aaKnown RBP19.01■□□□□ 0.63
USB1-204ENST00000561568 RTN1Q16799 776 aa19.01■□□□□ 0.63
USB1-204ENST00000561568 TKFCQ3LXA3 575 aa19.01■□□□□ 0.63
USB1-204ENST00000561568 CCDC174Q6PII3 467 aa19.01■□□□□ 0.63
USB1-204ENST00000561568 PLEKHH3Q7Z736 793 aa19.01■□□□□ 0.63
USB1-204ENST00000561568 CTU1Q7Z7A3 348 aaKnown RBP19.01■□□□□ 0.63
USB1-204ENST00000561568 NCAPG2Q86XI2 1143 aa19.01■□□□□ 0.63
USB1-204ENST00000561568 CCDC144CPQ8IYA2 1237 aa19.01■□□□□ 0.63
USB1-204ENST00000561568 SPZ1Q9BXG8 430 aa19.01■□□□□ 0.63
USB1-204ENST00000561568 ARHGAP39Q9C0H5 1083 aa19.01■□□□□ 0.63
USB1-204ENST00000561568 CPVLQ9H3G5 476 aa19.01■□□□□ 0.63
USB1-204ENST00000561568 IVNS1ABPQ9Y6Y0 642 aa19.01■□□□□ 0.63
USB1-204ENST00000561568 GOLGA8AA7E2F4 631 aa19■□□□□ 0.63
USB1-204ENST00000561568 GOLGA8BA8MQT2 603 aa19■□□□□ 0.63
USB1-204ENST00000561568 CTGFP29279 349 aa19■□□□□ 0.63
USB1-204ENST00000561568 SLC4A3P48751 1232 aa19■□□□□ 0.63
USB1-204ENST00000561568 SNAP25P60880 206 aa19■□□□□ 0.63
USB1-204ENST00000561568 RABEP1Q15276 862 aa19■□□□□ 0.63
USB1-204ENST00000561568 WDR78Q5VTH9 848 aa19■□□□□ 0.63
USB1-204ENST00000561568 OTOP1Q7RTM1 612 aa19■□□□□ 0.63
USB1-204ENST00000561568 GPR142Q7Z601 462 aa19■□□□□ 0.63
USB1-204ENST00000561568 CHST13Q8NET6 341 aa19■□□□□ 0.63
USB1-204ENST00000561568 MTMR8Q96EF0 704 aa19■□□□□ 0.63
USB1-204ENST00000561568 AGBL1Q96MI9 1066 aa19■□□□□ 0.63
USB1-204ENST00000561568 FBXO40Q9UH90 709 aa19■□□□□ 0.63
USB1-204ENST00000561568 TRIM17Q9Y577 477 aa19■□□□□ 0.63
USB1-204ENST00000561568 ZNF536O15090 1300 aa19■□□□□ 0.63
USB1-204ENST00000561568 ZBTB5O15062 677 aa18.99■□□□□ 0.63
USB1-204ENST00000561568 ECM2O94769 699 aaPredicted RBP18.99■□□□□ 0.63
USB1-204ENST00000561568 AK2P54819 239 aa18.99■□□□□ 0.63
USB1-204ENST00000561568 CDC37Q16543 378 aaPredicted RBP18.99■□□□□ 0.63
USB1-204ENST00000561568 NBPF11Q86T75 865 aa18.99■□□□□ 0.63
USB1-204ENST00000561568 RAB11FIP4Q86YS3 637 aa18.99■□□□□ 0.63
USB1-204ENST00000561568 ABRAQ8N0Z2 381 aa18.99■□□□□ 0.63
USB1-204ENST00000561568 SRBD1Q8N5C6 995 aaKnown RBP18.99■□□□□ 0.63
USB1-204ENST00000561568 SRRDQ9UH36 339 aa18.99■□□□□ 0.63
USB1-204ENST00000561568 CCPG1Q9ULG6 757 aa18.99■□□□□ 0.63
USB1-204ENST00000561568 HPS5Q9UPZ3 1129 aa18.99■□□□□ 0.63
USB1-204ENST00000561568 RIPK3Q9Y572 518 aa18.99■□□□□ 0.63
USB1-204ENST00000561568 PNMA6FA0A0J9YX94 578 aa18.98■□□□□ 0.63
USB1-204ENST00000561568 SLC15A5A6NIM6 579 aa18.98■□□□□ 0.63
USB1-204ENST00000561568 CYTH3O43739 400 aa18.98■□□□□ 0.63
USB1-204ENST00000561568 FCER1AP12319 257 aa18.98■□□□□ 0.63
USB1-204ENST00000561568 PTPREP23469 700 aa18.98■□□□□ 0.63
USB1-204ENST00000561568 ADD1P35611 737 aaKnown RBP18.98■□□□□ 0.63
USB1-204ENST00000561568 TMTC3Q6ZXV5 915 aa18.98■□□□□ 0.63
USB1-204ENST00000561568 RRP36Q96EU6 259 aaKnown RBP18.98■□□□□ 0.63
USB1-204ENST00000561568 TRERF1Q96PN7 1200 aa18.98■□□□□ 0.63
USB1-204ENST00000561568 NUDT12Q9BQG2 462 aa18.98■□□□□ 0.63
USB1-204ENST00000561568 AMNQ9BXJ7 453 aa18.98■□□□□ 0.63
USB1-204ENST00000561568 FAM217BQ9NTX9 383 aaPredicted RBP18.98■□□□□ 0.63
USB1-204ENST00000561568 GJD2Q9UKL4 321 aa18.98■□□□□ 0.63
USB1-204ENST00000561568 CASP8AP2Q9UKL3 1982 aa18.98■□□□□ 0.63
USB1-204ENST00000561568 PARP14Q460N5 1801 aa18.97■□□□□ 0.63
USB1-204ENST00000561568 ALAS1P13196 640 aa18.97■□□□□ 0.63
USB1-204ENST00000561568 CAP1Q01518 475 aa18.97■□□□□ 0.63
USB1-204ENST00000561568 QRICH1Q2TAL8 776 aa18.97■□□□□ 0.63
USB1-204ENST00000561568 FBXO11Q86XK2 927 aa18.97■□□□□ 0.63
USB1-204ENST00000561568 CCDC82Q8N4S0 544 aa18.97■□□□□ 0.63
USB1-204ENST00000561568 SOCS4Q8WXH5 440 aa18.97■□□□□ 0.63
USB1-204ENST00000561568 PIGSQ96S52 555 aa18.97■□□□□ 0.63
USB1-204ENST00000561568 LARP6Q9BRS8 491 aaKnown RBP18.97■□□□□ 0.63
USB1-204ENST00000561568 MAF1Q9H063 256 aa18.97■□□□□ 0.63
USB1-204ENST00000561568 SEC63Q9UGP8 760 aaKnown RBP18.97■□□□□ 0.63
USB1-204ENST00000561568 ST18O60284 1047 aa18.96■□□□□ 0.63
USB1-204ENST00000561568 PLEKHA8P1O95397 391 aa18.96■□□□□ 0.63
USB1-204ENST00000561568 CDC27P30260 824 aa18.96■□□□□ 0.63
USB1-204ENST00000561568 CCT2P78371 535 aaKnown RBP18.96■□□□□ 0.63
USB1-204ENST00000561568 KCTD2Q14681 263 aa18.96■□□□□ 0.63
USB1-204ENST00000561568 MORN1Q5T089 497 aa18.96■□□□□ 0.63
USB1-204ENST00000561568 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.96■□□□□ 0.63
USB1-204ENST00000561568 CMTR1Q8N1G2 835 aaKnown RBP18.96■□□□□ 0.63
USB1-204ENST00000561568 MMP19Q99542 508 aa18.96■□□□□ 0.63
USB1-204ENST00000561568 SLKQ9H2G2 1235 aaPredicted RBP18.96■□□□□ 0.63
USB1-204ENST00000561568 ACAD9Q9H845 621 aa18.96■□□□□ 0.63
USB1-204ENST00000561568 SLC5A4Q9NY91 659 aa18.96■□□□□ 0.63
USB1-204ENST00000561568 TPCN1Q9ULQ1 816 aa18.96■□□□□ 0.63
USB1-204ENST00000561568 LIMCH1Q9UPQ0 1083 aa18.96■□□□□ 0.63
USB1-204ENST00000561568 PTPN22Q9Y2R2 807 aa18.96■□□□□ 0.63
USB1-204ENST00000561568 NID2Q14112 1375 aa18.95■□□□□ 0.62
USB1-204ENST00000561568 FLT3LGP49771 235 aa18.95■□□□□ 0.62
USB1-204ENST00000561568 IRF5Q13568 498 aa18.95■□□□□ 0.62
USB1-204ENST00000561568 GRB14Q14449 540 aa18.95■□□□□ 0.62
USB1-204ENST00000561568 SLC35G1Q2M3R5 365 aa18.95■□□□□ 0.62
USB1-204ENST00000561568 CPLX2Q6PUV4 134 aaKnown RBP18.95■□□□□ 0.62
USB1-204ENST00000561568 HOMER1Q86YM7 354 aa18.95■□□□□ 0.62
USB1-204ENST00000561568 DDX11Q96FC9 970 aa18.95■□□□□ 0.62
USB1-204ENST00000561568 HOMER2Q9NSB8 354 aa18.95■□□□□ 0.62
USB1-204ENST00000561568 RNF146Q9NTX7 359 aa18.95■□□□□ 0.62
USB1-204ENST00000561568 MRPL11Q9Y3B7 192 aaKnown RBP18.95■□□□□ 0.62
USB1-204ENST00000561568 PCDHA1Q9Y5I3 950 aa18.95■□□□□ 0.62
USB1-204ENST00000561568 ABCB11O95342 1321 aa18.95■□□□□ 0.62
USB1-204ENST00000561568 A0A0G2JMZ2 1700 aa18.94■□□□□ 0.62
USB1-204ENST00000561568 CPLX1O14810 134 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms