RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 KLHDC7BQ96G42 594 aa4.51□□□□□ -1.69
SPG11-225ENST00000561391 TAOK3Q9H2K8 898 aa4.51□□□□□ -1.69
SPG11-225ENST00000561391 SH2B1Q9NRF2 756 aaPredicted RBP4.51□□□□□ -1.69
SPG11-225ENST00000561391 ASAP1Q9ULH1 1129 aa4.51□□□□□ -1.69
SPG11-225ENST00000561391 AK5Q9Y6K8 562 aa4.51□□□□□ -1.69
SPG11-225ENST00000561391 ZNF541Q9H0D2 1346 aa4.5□□□□□ -1.69
SPG11-225ENST00000561391 TMEM238LA0A1B0GVL6 79 aa4.5□□□□□ -1.69
SPG11-225ENST00000561391 E9PSI1 815 aa4.5□□□□□ -1.69
SPG11-225ENST00000561391 H3BRJ5 948 aa4.5□□□□□ -1.69
SPG11-225ENST00000561391 POLRMTO00411 1230 aaKnown RBP4.5□□□□□ -1.69
SPG11-225ENST00000561391 CYP26A1O43174 497 aa4.5□□□□□ -1.69
SPG11-225ENST00000561391 RPS6KA4O75676 772 aa4.5□□□□□ -1.69
SPG11-225ENST00000561391 USP17L7P0C7H9 530 aa4.5□□□□□ -1.69
SPG11-225ENST00000561391 TM4SF1P30408 202 aa4.5□□□□□ -1.69
SPG11-225ENST00000561391 GRIA4P48058 902 aa4.5□□□□□ -1.69
SPG11-225ENST00000561391 NFKBIBQ15653 356 aa4.5□□□□□ -1.69
SPG11-225ENST00000561391 ZNF124Q15973 351 aa4.5□□□□□ -1.69
SPG11-225ENST00000561391 TSNAXIP1Q2TAA8 658 aa4.5□□□□□ -1.69
SPG11-225ENST00000561391 FBXO46Q6PJ61 603 aaPredicted RBP4.5□□□□□ -1.69
SPG11-225ENST00000561391 ADAMTSL4Q6UY14 1074 aa4.5□□□□□ -1.69
SPG11-225ENST00000561391 CCNJLQ8IV13 435 aa4.5□□□□□ -1.69
SPG11-225ENST00000561391 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.5□□□□□ -1.69
SPG11-225ENST00000561391 TMEM102Q8N9M5 508 aaPredicted RBP4.5□□□□□ -1.69
SPG11-225ENST00000561391 SLC7A3Q8WY07 619 aa4.5□□□□□ -1.69
SPG11-225ENST00000561391 SNX27Q96L92 541 aa4.5□□□□□ -1.69
SPG11-225ENST00000561391 FRMD6Q96NE9 622 aa4.5□□□□□ -1.69
SPG11-225ENST00000561391 TCF12Q99081 682 aa4.5□□□□□ -1.69
SPG11-225ENST00000561391 C12orf49Q9H741 205 aa4.5□□□□□ -1.69
SPG11-225ENST00000561391 BSDC1Q9NW68 430 aaPredicted RBP4.5□□□□□ -1.69
SPG11-225ENST00000561391 SAGE1Q9NXZ1 904 aa4.5□□□□□ -1.69
SPG11-225ENST00000561391 SCN4AP35499 1836 aa4.5□□□□□ -1.69
SPG11-225ENST00000561391 TRIOBPQ9H2D6 2365 aa4.49□□□□□ -1.69
SPG11-225ENST00000561391 A0A096LPE4 126 aa4.49□□□□□ -1.69
SPG11-225ENST00000561391 A0A1W2PPZ6 126 aa4.49□□□□□ -1.69
SPG11-225ENST00000561391 DBX1A6NMT0 343 aa4.49□□□□□ -1.69
SPG11-225ENST00000561391 SOX1O00570 391 aaPredicted RBP4.49□□□□□ -1.69
SPG11-225ENST00000561391 GIPC1O14908 333 aa4.49□□□□□ -1.69
SPG11-225ENST00000561391 EPS15P42566 896 aa4.49□□□□□ -1.69
SPG11-225ENST00000561391 ZNF157P51786 506 aaPredicted RBP4.49□□□□□ -1.69
SPG11-225ENST00000561391 HUNKP57058 714 aa4.49□□□□□ -1.69
SPG11-225ENST00000561391 PAOXQ6QHF9 649 aa4.49□□□□□ -1.69
SPG11-225ENST00000561391 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.49□□□□□ -1.69
SPG11-225ENST00000561391 USHBP1Q8N6Y0 703 aa4.49□□□□□ -1.69
SPG11-225ENST00000561391 GLIS3Q8NEA6 775 aa4.49□□□□□ -1.69
SPG11-225ENST00000561391 ZNF296Q8WUU4 475 aaPredicted RBP4.49□□□□□ -1.69
SPG11-225ENST00000561391 BSNDQ8WZ55 320 aa4.49□□□□□ -1.69
SPG11-225ENST00000561391 HHIPL1Q96JK4 782 aa4.49□□□□□ -1.69
SPG11-225ENST00000561391 BACH2Q9BYV9 841 aa4.49□□□□□ -1.69
SPG11-225ENST00000561391 ABCB6Q9NP58 842 aa4.49□□□□□ -1.69
SPG11-225ENST00000561391 KIAA1522Q9P206 1035 aaPredicted RBP4.49□□□□□ -1.69
SPG11-225ENST00000561391 FAM8A1Q9UBU6 413 aa4.49□□□□□ -1.69
SPG11-225ENST00000561391 MKI67P46013 3256 aaKnown RBP4.49□□□□□ -1.69
SPG11-225ENST00000561391 DICER1Q9UPY3 1922 aaKnown RBP4.48□□□□□ -1.69
SPG11-225ENST00000561391 FAM95CA0A1B0GW59 222 aa4.48□□□□□ -1.69
SPG11-225ENST00000561391 FAM155AB1AL88 458 aaPredicted RBP4.48□□□□□ -1.69
SPG11-225ENST00000561391 BIN1O00499 593 aa4.48□□□□□ -1.69
SPG11-225ENST00000561391 TM4SF5O14894 197 aa4.48□□□□□ -1.69
SPG11-225ENST00000561391 FBXO24O75426 580 aa4.48□□□□□ -1.69
SPG11-225ENST00000561391 TBC1D8O95759 1140 aa4.48□□□□□ -1.69
SPG11-225ENST00000561391 SERPINB2P05120 415 aa4.48□□□□□ -1.69
SPG11-225ENST00000561391 GSTT1P30711 240 aa4.48□□□□□ -1.69
SPG11-225ENST00000561391 ARL4DP49703 201 aa4.48□□□□□ -1.69
SPG11-225ENST00000561391 DEFB123Q8N688 67 aa4.48□□□□□ -1.69
SPG11-225ENST00000561391 C12orf50Q8NA57 414 aaPredicted RBP4.48□□□□□ -1.69
SPG11-225ENST00000561391 TMEM87AQ8NBN3 555 aa4.48□□□□□ -1.69
SPG11-225ENST00000561391 RAPGEF4Q8WZA2 1011 aa4.48□□□□□ -1.69
SPG11-225ENST00000561391 DPF3Q92784 378 aa4.48□□□□□ -1.69
SPG11-225ENST00000561391 WNT8BQ93098 351 aa4.48□□□□□ -1.69
SPG11-225ENST00000561391 GLIS2Q9BZE0 524 aaPredicted RBP4.48□□□□□ -1.69
SPG11-225ENST00000561391 SRCIN1Q9C0H9 1055 aa4.48□□□□□ -1.69
SPG11-225ENST00000561391 BHLHE41Q9C0J9 482 aaPredicted RBP4.48□□□□□ -1.69
SPG11-225ENST00000561391 OSGEPQ9NPF4 335 aa4.48□□□□□ -1.69
SPG11-225ENST00000561391 ZNF277Q9NRM2 450 aaPredicted RBP4.48□□□□□ -1.69
SPG11-225ENST00000561391 CYP27B1O15528 508 aa4.47□□□□□ -1.69
SPG11-225ENST00000561391 USP11P51784 963 aa4.47□□□□□ -1.69
SPG11-225ENST00000561391 IKBKEQ14164 716 aa4.47□□□□□ -1.69
SPG11-225ENST00000561391 MEI1Q5TIA1 1274 aa4.47□□□□□ -1.69
SPG11-225ENST00000561391 NBPF6Q5VWK0 638 aa4.47□□□□□ -1.69
SPG11-225ENST00000561391 INTS3Q68E01 1043 aaKnown RBP4.47□□□□□ -1.69
SPG11-225ENST00000561391 RGMBQ6NW40 437 aa4.47□□□□□ -1.69
SPG11-225ENST00000561391 PRPF40BQ6NWY9 871 aaKnown RBP4.47□□□□□ -1.69
SPG11-225ENST00000561391 DLK2Q6UY11 383 aa4.47□□□□□ -1.69
SPG11-225ENST00000561391 TPTE2Q6XPS3 522 aa4.47□□□□□ -1.69
SPG11-225ENST00000561391 SPOCD1Q6ZMY3 1216 aa4.47□□□□□ -1.69
SPG11-225ENST00000561391 NFXL1Q6ZNB6 911 aa4.47□□□□□ -1.69
SPG11-225ENST00000561391 Q7L0L9 218 aa4.47□□□□□ -1.69
SPG11-225ENST00000561391 GPC2Q8N158 579 aa4.47□□□□□ -1.69
SPG11-225ENST00000561391 IP6K1Q92551 441 aa4.47□□□□□ -1.69
SPG11-225ENST00000561391 NBPF4Q96M43 638 aa4.47□□□□□ -1.69
SPG11-225ENST00000561391 TBC1D32Q96NH3 1257 aa4.47□□□□□ -1.69
SPG11-225ENST00000561391 CYP4F12Q9HCS2 524 aa4.47□□□□□ -1.69
SPG11-225ENST00000561391 TMOD3Q9NYL9 352 aa4.47□□□□□ -1.69
SPG11-225ENST00000561391 TTF2Q9UNY4 1162 aaKnown RBP4.47□□□□□ -1.69
SPG11-225ENST00000561391 STXBP5LQ9Y2K9 1186 aa4.47□□□□□ -1.69
SPG11-225ENST00000561391 ADAMTSL1Q8N6G6 1762 aa4.47□□□□□ -1.69
SPG11-225ENST00000561391 TRPM7Q96QT4 1865 aa4.47□□□□□ -1.69
SPG11-225ENST00000561391 LTBP3Q9NS15 1303 aa4.46□□□□□ -1.69
SPG11-225ENST00000561391 NFAT5O94916 1531 aa4.46□□□□□ -1.69
SPG11-225ENST00000561391 ADGRB1O14514 1584 aa4.46□□□□□ -1.7
SPG11-225ENST00000561391 TMEM265A0A087WTH1 108 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms