RNA–Protein interactions for RNA: ENST00000561377.1

HMBOX1-216, Transcript of homeobox containing 1, humanhuman

TSL 5

Gene HMBOX1, Length 307 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-216ENST00000561377 NAT16Q8N8M0 369 aa8.23□□□□□ -1.09
HMBOX1-216ENST00000561377 NUP43Q8NFH3 380 aa8.23□□□□□ -1.09
HMBOX1-216ENST00000561377 DDX41Q9UJV9 622 aaKnown RBP8.23□□□□□ -1.09
HMBOX1-216ENST00000561377 ACSL6Q9UKU0 697 aa8.23□□□□□ -1.09
HMBOX1-216ENST00000561377 PPT2Q9UMR5 302 aa8.23□□□□□ -1.09
HMBOX1-216ENST00000561377 IRAK3Q9Y616 596 aa8.23□□□□□ -1.09
HMBOX1-216ENST00000561377 SCAMP3O14828 347 aaKnown RBP8.22□□□□□ -1.09
HMBOX1-216ENST00000561377 GSTM1P09488 218 aa8.22□□□□□ -1.09
HMBOX1-216ENST00000561377 SDHBP21912 280 aa8.22□□□□□ -1.09
HMBOX1-216ENST00000561377 VAMP1P23763 118 aa8.22□□□□□ -1.09
HMBOX1-216ENST00000561377 NOP2P46087 812 aaKnown RBP8.22□□□□□ -1.09
HMBOX1-216ENST00000561377 RACK1P63244 317 aaKnown RBP8.22□□□□□ -1.09
HMBOX1-216ENST00000561377 CYP4F8P98187 520 aa8.22□□□□□ -1.09
HMBOX1-216ENST00000561377 RTP2Q5QGT7 225 aa8.22□□□□□ -1.09
HMBOX1-216ENST00000561377 HLA-DQA1Q5Y7H0 255 aa8.22□□□□□ -1.09
HMBOX1-216ENST00000561377 DCAF15Q66K64 600 aa8.22□□□□□ -1.09
HMBOX1-216ENST00000561377 UNC5AQ6ZN44 842 aa8.22□□□□□ -1.09
HMBOX1-216ENST00000561377 SPATA32Q96LK8 384 aa8.22□□□□□ -1.09
HMBOX1-216ENST00000561377 GP6Q9HCN6 339 aa8.22□□□□□ -1.09
HMBOX1-216ENST00000561377 A0A1W2PQ27 194 aa8.21□□□□□ -1.1
HMBOX1-216ENST00000561377 A0A1W2PQ64 194 aa8.21□□□□□ -1.1
HMBOX1-216ENST00000561377 A0A1W2PQC6 194 aa8.21□□□□□ -1.1
HMBOX1-216ENST00000561377 A0A1W2PQD8 194 aa8.21□□□□□ -1.1
HMBOX1-216ENST00000561377 N4BP3O15049 544 aa8.21□□□□□ -1.1
HMBOX1-216ENST00000561377 SSPNQ14714 243 aa8.21□□□□□ -1.1
HMBOX1-216ENST00000561377 KIR3DS1Q14943 382 aa8.21□□□□□ -1.1
HMBOX1-216ENST00000561377 RAB3GAP1Q15042 981 aa8.21□□□□□ -1.1
HMBOX1-216ENST00000561377 AXDND1Q5T1B0 1012 aaPredicted RBP8.21□□□□□ -1.1
HMBOX1-216ENST00000561377 LSRQ86X29 649 aaPredicted RBP8.21□□□□□ -1.1
HMBOX1-216ENST00000561377 ZNF654Q8IZM8 581 aa8.21□□□□□ -1.1
HMBOX1-216ENST00000561377 CRBNQ96SW2 442 aa8.21□□□□□ -1.1
HMBOX1-216ENST00000561377 SLC12A9Q9BXP2 914 aa8.21□□□□□ -1.1
HMBOX1-216ENST00000561377 SRRTQ9BXP5 876 aaKnown RBP8.21□□□□□ -1.1
HMBOX1-216ENST00000561377 CNTD2Q9H8S5 307 aa8.21□□□□□ -1.1
HMBOX1-216ENST00000561377 TNFRSF12AQ9NP84 129 aa8.21□□□□□ -1.1
HMBOX1-216ENST00000561377 KLHL14Q9P2G3 628 aa8.21□□□□□ -1.1
HMBOX1-216ENST00000561377 IMPACTQ9P2X3 320 aa8.21□□□□□ -1.1
HMBOX1-216ENST00000561377 FHOD1Q9Y613 1164 aa8.21□□□□□ -1.1
HMBOX1-216ENST00000561377 H0Y8X5 98 aa8.2□□□□□ -1.1
HMBOX1-216ENST00000561377 RECKO95980 971 aa8.2□□□□□ -1.1
HMBOX1-216ENST00000561377 TP53P04637 393 aaPredicted RBP8.2□□□□□ -1.1
HMBOX1-216ENST00000561377 ITGA4P13612 1032 aa8.2□□□□□ -1.1
HMBOX1-216ENST00000561377 PI3P19957 117 aa8.2□□□□□ -1.1
HMBOX1-216ENST00000561377 CD247P20963 164 aa8.2□□□□□ -1.1
HMBOX1-216ENST00000561377 CEBPAP49715 358 aaPredicted RBP8.2□□□□□ -1.1
HMBOX1-216ENST00000561377 ZNF445P59923 1031 aa8.2□□□□□ -1.1
HMBOX1-216ENST00000561377 ZYXQ15942 572 aaKnown RBP8.2□□□□□ -1.1
HMBOX1-216ENST00000561377 CYP2R1Q6VVX0 501 aa8.2□□□□□ -1.1
HMBOX1-216ENST00000561377 RUFY4Q6ZNE9 571 aa8.2□□□□□ -1.1
HMBOX1-216ENST00000561377 TMEM52Q8NDY8 209 aa8.2□□□□□ -1.1
HMBOX1-216ENST00000561377 BRF1Q92994 677 aa8.2□□□□□ -1.1
HMBOX1-216ENST00000561377 JMJD8Q96S16 334 aa8.2□□□□□ -1.1
HMBOX1-216ENST00000561377 SF3B6Q9Y3B4 125 aaKnown RBP8.2□□□□□ -1.1
HMBOX1-216ENST00000561377 SLC12A7Q9Y666 1083 aa8.2□□□□□ -1.1
HMBOX1-216ENST00000561377 EPHB3P54753 998 aa8.19□□□□□ -1.1
HMBOX1-216ENST00000561377 JAMLQ86YT9 394 aa8.19□□□□□ -1.1
HMBOX1-216ENST00000561377 FIBCD1Q8N539 461 aa8.19□□□□□ -1.1
HMBOX1-216ENST00000561377 ZNF214Q9UL59 606 aaPredicted RBP8.19□□□□□ -1.1
HMBOX1-216ENST00000561377 NUDT19A8MXV4 375 aa8.18□□□□□ -1.1
HMBOX1-216ENST00000561377 POU4F1Q01851 419 aa8.18□□□□□ -1.1
HMBOX1-216ENST00000561377 PAK2Q13177 524 aa8.18□□□□□ -1.1
HMBOX1-216ENST00000561377 TCEAL1Q15170 157 aa8.18□□□□□ -1.1
HMBOX1-216ENST00000561377 TMC6Q7Z403 805 aa8.18□□□□□ -1.1
HMBOX1-216ENST00000561377 MZB1Q8WU39 189 aa8.18□□□□□ -1.1
HMBOX1-216ENST00000561377 FAM86C1Q9NVL1 165 aa8.18□□□□□ -1.1
HMBOX1-216ENST00000561377 ZNF451Q9Y4E5 1061 aa8.18□□□□□ -1.1
HMBOX1-216ENST00000561377 A0A087WZG4 1122 aa8.17□□□□□ -1.1
HMBOX1-216ENST00000561377 FGF10O15520 208 aaPredicted RBP8.17□□□□□ -1.1
HMBOX1-216ENST00000561377 BMP7P18075 431 aa8.17□□□□□ -1.1
HMBOX1-216ENST00000561377 CDR1P51861 262 aa8.17□□□□□ -1.1
HMBOX1-216ENST00000561377 CBX2Q14781 532 aaPredicted RBP8.17□□□□□ -1.1
HMBOX1-216ENST00000561377 NR1I3Q14994 352 aa8.17□□□□□ -1.1
HMBOX1-216ENST00000561377 CCDC81Q6ZN84 652 aa8.17□□□□□ -1.1
HMBOX1-216ENST00000561377 RGS22Q8NE09 1264 aa8.17□□□□□ -1.1
HMBOX1-216ENST00000561377 ZCCHC4Q9H5U6 513 aa8.17□□□□□ -1.1
HMBOX1-216ENST00000561377 NOL6Q9H6R4 1146 aaKnown RBP8.17□□□□□ -1.1
HMBOX1-216ENST00000561377 PARD6AQ9NPB6 346 aa8.17□□□□□ -1.1
HMBOX1-216ENST00000561377 GINM1Q9NU53 330 aa8.17□□□□□ -1.1
HMBOX1-216ENST00000561377 KRTAP9-7A8MTY7 169 aa8.16□□□□□ -1.1
HMBOX1-216ENST00000561377 IRS4O14654 1257 aaPredicted RBP8.16□□□□□ -1.1
HMBOX1-216ENST00000561377 CTSWP56202 376 aa8.16□□□□□ -1.1
HMBOX1-216ENST00000561377 EIF6P56537 245 aaKnown RBP8.16□□□□□ -1.1
HMBOX1-216ENST00000561377 MVKQ03426 396 aa8.16□□□□□ -1.1
HMBOX1-216ENST00000561377 LDHDQ86WU2 507 aa8.16□□□□□ -1.1
HMBOX1-216ENST00000561377 KRTAP4-9Q9BYQ8 210 aa8.16□□□□□ -1.1
HMBOX1-216ENST00000561377 A0A1W2PQJ5 194 aa8.15□□□□□ -1.1
HMBOX1-216ENST00000561377 HOXA5P20719 270 aa8.15□□□□□ -1.1
HMBOX1-216ENST00000561377 SOX9P48436 509 aa8.15□□□□□ -1.1
HMBOX1-216ENST00000561377 AFF3P51826 1226 aaKnown RBP8.15□□□□□ -1.1
HMBOX1-216ENST00000561377 OR6P1Q8NGX9 317 aa8.15□□□□□ -1.1
HMBOX1-216ENST00000561377 RASGRP4Q8TDF6 673 aa8.15□□□□□ -1.1
HMBOX1-216ENST00000561377 PANK1Q8TE04 598 aa8.15□□□□□ -1.1
HMBOX1-216ENST00000561377 DACT3Q96B18 629 aaPredicted RBP8.15□□□□□ -1.1
HMBOX1-216ENST00000561377 GPRASP2Q96D09 838 aa8.15□□□□□ -1.1
HMBOX1-216ENST00000561377 EFR3BQ9Y2G0 817 aa8.15□□□□□ -1.1
HMBOX1-216ENST00000561377 DIS3Q9Y2L1 958 aaKnown RBP8.15□□□□□ -1.1
HMBOX1-216ENST00000561377 ADAMTS20P59510 1910 aa8.15□□□□□ -1.11
HMBOX1-216ENST00000561377 LTBP3Q9NS15 1303 aa8.14□□□□□ -1.11
HMBOX1-216ENST00000561377 TBC1D8O95759 1140 aa8.14□□□□□ -1.11
HMBOX1-216ENST00000561377 CD3EP07766 207 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms