RNA–Protein interactions for RNA: ENST00000561276.5

LRRC28-221, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-221ENST00000561276 GPRC5AQ8NFJ5 357 aa11.95□□□□□ -0.5
LRRC28-221ENST00000561276 GTF3C2Q8WUA4 911 aaPredicted RBP11.95□□□□□ -0.5
LRRC28-221ENST00000561276 LZTS2Q9BRK4 669 aa11.95□□□□□ -0.5
LRRC28-221ENST00000561276 SLKQ9H2G2 1235 aaPredicted RBP11.95□□□□□ -0.5
LRRC28-221ENST00000561276 RIOX1Q9H6W3 641 aa11.95□□□□□ -0.5
LRRC28-221ENST00000561276 SLC38A10Q9HBR0 1119 aa11.95□□□□□ -0.5
LRRC28-221ENST00000561276 RBM28Q9NW13 759 aaKnown RBP11.95□□□□□ -0.5
LRRC28-221ENST00000561276 ZNFX1Q9P2E3 1918 aaKnown RBP11.95□□□□□ -0.5
LRRC28-221ENST00000561276 BAZ2BQ9UIF8 2168 aaKnown RBP11.94□□□□□ -0.5
LRRC28-221ENST00000561276 GPR25O00155 361 aa11.94□□□□□ -0.5
LRRC28-221ENST00000561276 CYTH3O43739 400 aa11.94□□□□□ -0.5
LRRC28-221ENST00000561276 PFKFB2O60825 505 aa11.94□□□□□ -0.5
LRRC28-221ENST00000561276 PLEKHA8P1O95397 391 aa11.94□□□□□ -0.5
LRRC28-221ENST00000561276 CD2BP2O95400 341 aaKnown RBP11.94□□□□□ -0.5
LRRC28-221ENST00000561276 LARGE1O95461 756 aa11.94□□□□□ -0.5
LRRC28-221ENST00000561276 SLC4A3P48751 1232 aa11.94□□□□□ -0.5
LRRC28-221ENST00000561276 ERVK-9P63128 1117 aa11.94□□□□□ -0.5
LRRC28-221ENST00000561276 ERVK-24P63145 666 aa11.94□□□□□ -0.5
LRRC28-221ENST00000561276 FAM110CQ1W6H9 321 aa11.94□□□□□ -0.5
LRRC28-221ENST00000561276 SLC35G1Q2M3R5 365 aa11.94□□□□□ -0.5
LRRC28-221ENST00000561276 REPS2Q8NFH8 660 aa11.94□□□□□ -0.5
LRRC28-221ENST00000561276 RANBP17Q9H2T7 1088 aaKnown RBP11.94□□□□□ -0.5
LRRC28-221ENST00000561276 NCOA5Q9HCD5 579 aaKnown RBP11.94□□□□□ -0.5
LRRC28-221ENST00000561276 RAVER2Q9HCJ3 691 aaKnown RBP11.94□□□□□ -0.5
LRRC28-221ENST00000561276 MORF4L1Q9UBU8 362 aa11.94□□□□□ -0.5
LRRC28-221ENST00000561276 ZNF536O15090 1300 aa11.93□□□□□ -0.5
LRRC28-221ENST00000561276 HSPA1AP0DMV8 641 aaKnown RBP11.93□□□□□ -0.5
LRRC28-221ENST00000561276 HSPA1BP0DMV9 641 aaKnown RBP11.93□□□□□ -0.5
LRRC28-221ENST00000561276 STAT3P40763 770 aa11.93□□□□□ -0.5
LRRC28-221ENST00000561276 SP3Q02447 781 aa11.93□□□□□ -0.5
LRRC28-221ENST00000561276 CCDC174Q6PII3 467 aa11.93□□□□□ -0.5
LRRC28-221ENST00000561276 TMTC3Q6ZXV5 915 aa11.93□□□□□ -0.5
LRRC28-221ENST00000561276 NECAB1Q8N987 351 aa11.93□□□□□ -0.5
LRRC28-221ENST00000561276 PIBF1Q8WXW3 757 aa11.93□□□□□ -0.5
LRRC28-221ENST00000561276 MTMR8Q96EF0 704 aa11.93□□□□□ -0.5
LRRC28-221ENST00000561276 ZSCAN31Q96LW9 406 aaPredicted RBP11.93□□□□□ -0.5
LRRC28-221ENST00000561276 AGBL1Q96MI9 1066 aa11.93□□□□□ -0.5
LRRC28-221ENST00000561276 PIGSQ96S52 555 aa11.93□□□□□ -0.5
LRRC28-221ENST00000561276 SPZ1Q9BXG8 430 aa11.93□□□□□ -0.5
LRRC28-221ENST00000561276 SPATC1LQ9H0A9 340 aa11.93□□□□□ -0.5
LRRC28-221ENST00000561276 ZNF214Q9UL59 606 aaPredicted RBP11.93□□□□□ -0.5
LRRC28-221ENST00000561276 ZSWIM8A7E2V4 1837 aa11.93□□□□□ -0.5
LRRC28-221ENST00000561276 NID2Q14112 1375 aa11.92□□□□□ -0.5
LRRC28-221ENST00000561276 PCNTO95613 3336 aa11.92□□□□□ -0.5
LRRC28-221ENST00000561276 ATP2A1O14983 1001 aa11.92□□□□□ -0.5
LRRC28-221ENST00000561276 ZBTB5O15062 677 aa11.92□□□□□ -0.5
LRRC28-221ENST00000561276 FOXN1O15353 648 aa11.92□□□□□ -0.5
LRRC28-221ENST00000561276 ECM2O94769 699 aaPredicted RBP11.92□□□□□ -0.5
LRRC28-221ENST00000561276 ICAM1P05362 532 aa11.92□□□□□ -0.5
LRRC28-221ENST00000561276 PRR29P0C7W0 189 aa11.92□□□□□ -0.5
LRRC28-221ENST00000561276 OAZ1P54368 228 aa11.92□□□□□ -0.5
LRRC28-221ENST00000561276 CCNA1P78396 465 aa11.92□□□□□ -0.5
LRRC28-221ENST00000561276 FUT2Q10981 343 aa11.92□□□□□ -0.5
LRRC28-221ENST00000561276 SCRN1Q12765 414 aa11.92□□□□□ -0.5
LRRC28-221ENST00000561276 NTRK3Q16288 839 aa11.92□□□□□ -0.5
LRRC28-221ENST00000561276 CDC37Q16543 378 aaPredicted RBP11.92□□□□□ -0.5
LRRC28-221ENST00000561276 NOM1Q5C9Z4 860 aaKnown RBP11.92□□□□□ -0.5
LRRC28-221ENST00000561276 SNRNP48Q6IEG0 339 aaKnown RBP11.92□□□□□ -0.5
LRRC28-221ENST00000561276 HOMER1Q86YM7 354 aa11.92□□□□□ -0.5
LRRC28-221ENST00000561276 CCAR1Q8IX12 1150 aaKnown RBP11.92□□□□□ -0.5
LRRC28-221ENST00000561276 RRP36Q96EU6 259 aaKnown RBP11.92□□□□□ -0.5
LRRC28-221ENST00000561276 MOV10L1Q9BXT6 1211 aaKnown RBP11.92□□□□□ -0.5
LRRC28-221ENST00000561276 RIPK3Q9Y572 518 aa11.92□□□□□ -0.5
LRRC28-221ENST00000561276 V9GY48 417 aaPredicted RBP11.92□□□□□ -0.5
LRRC28-221ENST00000561276 CASP8AP2Q9UKL3 1982 aa11.91□□□□□ -0.5
LRRC28-221ENST00000561276 PNMA6FA0A0J9YX94 578 aa11.91□□□□□ -0.5
LRRC28-221ENST00000561276 hCG_1642624A0A1W2PR95 340 aa11.91□□□□□ -0.5
LRRC28-221ENST00000561276 C19orf67A6NJJ6 358 aa11.91□□□□□ -0.5
LRRC28-221ENST00000561276 CPLX1O14810 134 aa11.91□□□□□ -0.5
LRRC28-221ENST00000561276 FKTNO75072 461 aa11.91□□□□□ -0.5
LRRC28-221ENST00000561276 PPFIA3O75145 1194 aa11.91□□□□□ -0.5
LRRC28-221ENST00000561276 ALAS1P13196 640 aa11.91□□□□□ -0.5
LRRC28-221ENST00000561276 IFNAR1P17181 557 aa11.91□□□□□ -0.5
LRRC28-221ENST00000561276 MCM2P49736 904 aa11.91□□□□□ -0.5
LRRC28-221ENST00000561276 LACTBP83111 547 aaPredicted RBP11.91□□□□□ -0.5
LRRC28-221ENST00000561276 KIF22Q14807 665 aa11.91□□□□□ -0.5
LRRC28-221ENST00000561276 QRICH1Q2TAL8 776 aa11.91□□□□□ -0.5
LRRC28-221ENST00000561276 FBXO11Q86XK2 927 aa11.91□□□□□ -0.5
LRRC28-221ENST00000561276 RIOX2Q8IUF8 465 aa11.91□□□□□ -0.5
LRRC28-221ENST00000561276 ZNF296Q8WUU4 475 aaPredicted RBP11.91□□□□□ -0.5
LRRC28-221ENST00000561276 PHKBQ93100 1093 aa11.91□□□□□ -0.5
LRRC28-221ENST00000561276 TEX13BQ9BXU2 312 aa11.91□□□□□ -0.5
LRRC28-221ENST00000561276 PORCNQ9H237 461 aa11.91□□□□□ -0.5
LRRC28-221ENST00000561276 CCPG1Q9ULG6 757 aa11.91□□□□□ -0.5
LRRC28-221ENST00000561276 PLXNB2O15031 1838 aa11.9□□□□□ -0.5
LRRC28-221ENST00000561276 CNTNAP5Q8WYK1 1306 aa11.9□□□□□ -0.5
LRRC28-221ENST00000561276 PRPF3O43395 683 aaKnown RBP11.9□□□□□ -0.5
LRRC28-221ENST00000561276 PPP1R11O60927 126 aaPredicted RBP11.9□□□□□ -0.5
LRRC28-221ENST00000561276 DTNBO60941 627 aa11.9□□□□□ -0.5
LRRC28-221ENST00000561276 SLC25A27O95847 323 aa11.9□□□□□ -0.5
LRRC28-221ENST00000561276 HSPA8P11142 646 aaKnown RBP11.9□□□□□ -0.5
LRRC28-221ENST00000561276 ERCC3P19447 782 aa11.9□□□□□ -0.5
LRRC28-221ENST00000561276 PSMC4P43686 418 aa11.9□□□□□ -0.5
LRRC28-221ENST00000561276 CTCFP49711 727 aaPredicted RBP11.9□□□□□ -0.5
LRRC28-221ENST00000561276 LBX1P52954 281 aa11.9□□□□□ -0.5
LRRC28-221ENST00000561276 SSRP1Q08945 709 aaKnown RBP11.9□□□□□ -0.5
LRRC28-221ENST00000561276 USH1GQ495M9 461 aa11.9□□□□□ -0.5
LRRC28-221ENST00000561276 WDR78Q5VTH9 848 aa11.9□□□□□ -0.5
LRRC28-221ENST00000561276 CPLX2Q6PUV4 134 aaKnown RBP11.9□□□□□ -0.5
LRRC28-221ENST00000561276 NCAPG2Q86XI2 1143 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms