RNA–Protein interactions for RNA: ENST00000560986.1

HMG20A-212, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 747 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-212ENST00000560986 MPRIPQ6WCQ1 1025 aa7□□□□□ -1.29
HMG20A-212ENST00000560986 Q6ZS46 218 aa7□□□□□ -1.29
HMG20A-212ENST00000560986 CHD1LQ86WJ1 897 aa7□□□□□ -1.29
HMG20A-212ENST00000560986 PHC3Q8NDX5 983 aa7□□□□□ -1.29
HMG20A-212ENST00000560986 LINS1Q8NG48 757 aa7□□□□□ -1.29
HMG20A-212ENST00000560986 DDX17Q92841 729 aaKnown RBP7□□□□□ -1.29
HMG20A-212ENST00000560986 RHOVQ96L33 236 aa7□□□□□ -1.29
HMG20A-212ENST00000560986 TLR6Q9Y2C9 796 aa7□□□□□ -1.29
HMG20A-212ENST00000560986 INPP5FQ9Y2H2 1132 aa7□□□□□ -1.29
HMG20A-212ENST00000560986 PAPPAQ13219 1627 aa7□□□□□ -1.29
HMG20A-212ENST00000560986 UTYO14607 1347 aa7□□□□□ -1.29
HMG20A-212ENST00000560986 AOX1Q06278 1338 aa7□□□□□ -1.29
HMG20A-212ENST00000560986 SPATA31A6Q5VVP1 1343 aa7□□□□□ -1.29
HMG20A-212ENST00000560986 LINC01387J3KSC0 135 aa6.99□□□□□ -1.29
HMG20A-212ENST00000560986 EPB41L2O43491 1005 aaKnown RBP6.99□□□□□ -1.29
HMG20A-212ENST00000560986 IGSF3O75054 1194 aa6.99□□□□□ -1.29
HMG20A-212ENST00000560986 RAB11FIP3O75154 756 aa6.99□□□□□ -1.29
HMG20A-212ENST00000560986 BMP6P22004 513 aa6.99□□□□□ -1.29
HMG20A-212ENST00000560986 NME2P22392 152 aa6.99□□□□□ -1.29
HMG20A-212ENST00000560986 EIF4A3P38919 411 aaKnown RBP6.99□□□□□ -1.29
HMG20A-212ENST00000560986 RPS26P62854 115 aaKnown RBP6.99□□□□□ -1.29
HMG20A-212ENST00000560986 LCE3BQ5TA77 95 aa6.99□□□□□ -1.29
HMG20A-212ENST00000560986 FAM117BQ6P1L5 589 aa6.99□□□□□ -1.29
HMG20A-212ENST00000560986 CEP85Q6P2H3 762 aa6.99□□□□□ -1.29
HMG20A-212ENST00000560986 AGMOQ6ZNB7 445 aa6.99□□□□□ -1.29
HMG20A-212ENST00000560986 TICAM2Q86XR7 235 aa6.99□□□□□ -1.29
HMG20A-212ENST00000560986 AGGF1Q8N302 714 aaeCLIP6.99□□□□□ -1.29
HMG20A-212ENST00000560986 SLC43A3Q8NBI5 491 aa6.99□□□□□ -1.29
HMG20A-212ENST00000560986 DDX54Q8TDD1 881 aaKnown RBP6.99□□□□□ -1.29
HMG20A-212ENST00000560986 SREK1Q8WXA9 508 aaKnown RBP6.99□□□□□ -1.29
HMG20A-212ENST00000560986 DNAAF4Q8WXU2 420 aa6.99□□□□□ -1.29
HMG20A-212ENST00000560986 SPON2Q9BUD6 331 aa6.99□□□□□ -1.29
HMG20A-212ENST00000560986 SOX17Q9H6I2 414 aaPredicted RBP6.99□□□□□ -1.29
HMG20A-212ENST00000560986 USP35Q9P2H5 1018 aa6.99□□□□□ -1.29
HMG20A-212ENST00000560986 ADAMTS1Q9UHI8 967 aa6.99□□□□□ -1.29
HMG20A-212ENST00000560986 SAMM50Q9Y512 469 aa6.99□□□□□ -1.29
HMG20A-212ENST00000560986 LAMB4A4D0S4 1761 aa6.99□□□□□ -1.29
HMG20A-212ENST00000560986 CICQ96RK0 1608 aaPredicted RBP6.98□□□□□ -1.29
HMG20A-212ENST00000560986 JCADQ9P266 1359 aa6.98□□□□□ -1.29
HMG20A-212ENST00000560986 UBR2Q8IWV8 1755 aa6.98□□□□□ -1.29
HMG20A-212ENST00000560986 SLIT2O94813 1529 aa6.98□□□□□ -1.29
HMG20A-212ENST00000560986 UBTFL1P0CB47 393 aaPredicted RBP6.98□□□□□ -1.29
HMG20A-212ENST00000560986 PIP4K2BP78356 416 aa6.98□□□□□ -1.29
HMG20A-212ENST00000560986 NEXNQ0ZGT2 675 aa6.98□□□□□ -1.29
HMG20A-212ENST00000560986 PAK2Q13177 524 aa6.98□□□□□ -1.29
HMG20A-212ENST00000560986 CHRNA2Q15822 529 aa6.98□□□□□ -1.29
HMG20A-212ENST00000560986 KRT24Q2M2I5 525 aa6.98□□□□□ -1.29
HMG20A-212ENST00000560986 HGSNATQ68CP4 663 aa6.98□□□□□ -1.29
HMG20A-212ENST00000560986 TXNDC11Q6PKC3 985 aa6.98□□□□□ -1.29
HMG20A-212ENST00000560986 SLC51AQ86UW1 340 aa6.98□□□□□ -1.29
HMG20A-212ENST00000560986 KIAA0825Q8IV33 1275 aa6.98□□□□□ -1.29
HMG20A-212ENST00000560986 SULF2Q8IWU5 870 aa6.98□□□□□ -1.29
HMG20A-212ENST00000560986 GALNT11Q8NCW6 608 aa6.98□□□□□ -1.29
HMG20A-212ENST00000560986 SLC7A3Q8WY07 619 aa6.98□□□□□ -1.29
HMG20A-212ENST00000560986 WNT8BQ93098 351 aa6.98□□□□□ -1.29
HMG20A-212ENST00000560986 MIS18AQ9NYP9 233 aa6.98□□□□□ -1.29
HMG20A-212ENST00000560986 TNNQ9UQP3 1299 aa6.98□□□□□ -1.29
HMG20A-212ENST00000560986 VIRMAQ69YN4 1812 aaKnown RBP6.98□□□□□ -1.29
HMG20A-212ENST00000560986 PHLPP1O60346 1717 aa6.98□□□□□ -1.29
HMG20A-212ENST00000560986 BCL9O00512 1426 aa6.97□□□□□ -1.29
HMG20A-212ENST00000560986 TM4SF5O14894 197 aa6.97□□□□□ -1.29
HMG20A-212ENST00000560986 PF4P02776 101 aa6.97□□□□□ -1.29
HMG20A-212ENST00000560986 TFE3P19532 575 aaPredicted RBP6.97□□□□□ -1.29
HMG20A-212ENST00000560986 ARNTP27540 789 aa6.97□□□□□ -1.29
HMG20A-212ENST00000560986 GJA8P48165 433 aa6.97□□□□□ -1.29
HMG20A-212ENST00000560986 ARL4DP49703 201 aa6.97□□□□□ -1.29
HMG20A-212ENST00000560986 ATP8B2P98198 1209 aa6.97□□□□□ -1.29
HMG20A-212ENST00000560986 LMNB2Q03252 620 aa6.97□□□□□ -1.29
HMG20A-212ENST00000560986 FAM160A1Q05DH4 1040 aa6.97□□□□□ -1.29
HMG20A-212ENST00000560986 C19orf57Q0VDD7 668 aa6.97□□□□□ -1.29
HMG20A-212ENST00000560986 CAMK2GQ13555 558 aaPredicted RBP6.97□□□□□ -1.29
HMG20A-212ENST00000560986 SF3A1Q15459 793 aaKnown RBP6.97□□□□□ -1.29
HMG20A-212ENST00000560986 BEND3Q5T5X7 828 aa6.97□□□□□ -1.29
HMG20A-212ENST00000560986 RASIP1Q5U651 963 aa6.97□□□□□ -1.29
HMG20A-212ENST00000560986 ERC1Q8IUD2 1116 aa6.97□□□□□ -1.29
HMG20A-212ENST00000560986 MAP4K3Q8IVH8 894 aa6.97□□□□□ -1.29
HMG20A-212ENST00000560986 STK35Q8TDR2 534 aa6.97□□□□□ -1.29
HMG20A-212ENST00000560986 SSH3Q8TE77 659 aa6.97□□□□□ -1.29
HMG20A-212ENST00000560986 ZNF296Q8WUU4 475 aaPredicted RBP6.97□□□□□ -1.29
HMG20A-212ENST00000560986 IPO9Q96P70 1041 aaKnown RBP6.97□□□□□ -1.29
HMG20A-212ENST00000560986 UBL7Q96S82 380 aaPredicted RBP6.97□□□□□ -1.29
HMG20A-212ENST00000560986 KCNQ5Q9NR82 932 aa6.97□□□□□ -1.29
HMG20A-212ENST00000560986 BTG4Q9NY30 223 aa6.97□□□□□ -1.29
HMG20A-212ENST00000560986 CHPF2Q9P2E5 772 aa6.97□□□□□ -1.29
HMG20A-212ENST00000560986 CYP8B1Q9UNU6 501 aa6.97□□□□□ -1.29
HMG20A-212ENST00000560986 GLI3P10071 1580 aa6.96□□□□□ -1.29
HMG20A-212ENST00000560986 PI4KAP2A4QPH2 592 aa6.96□□□□□ -1.3
HMG20A-212ENST00000560986 EXOC5O00471 708 aa6.96□□□□□ -1.3
HMG20A-212ENST00000560986 FSCN2O14926 492 aa6.96□□□□□ -1.3
HMG20A-212ENST00000560986 LMNB1P20700 586 aa6.96□□□□□ -1.3
HMG20A-212ENST00000560986 GARTP22102 1010 aa6.96□□□□□ -1.3
HMG20A-212ENST00000560986 SSTR4P31391 388 aa6.96□□□□□ -1.3
HMG20A-212ENST00000560986 GSTM4Q03013 218 aa6.96□□□□□ -1.3
HMG20A-212ENST00000560986 AP3B2Q13367 1082 aa6.96□□□□□ -1.3
HMG20A-212ENST00000560986 LRRC14Q15048 493 aa6.96□□□□□ -1.3
HMG20A-212ENST00000560986 FBXL19Q6PCT2 694 aa6.96□□□□□ -1.3
HMG20A-212ENST00000560986 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.96□□□□□ -1.3
HMG20A-212ENST00000560986 KRTAP19-1Q8IUB9 90 aa6.96□□□□□ -1.3
HMG20A-212ENST00000560986 TRIM42Q8IWZ5 723 aa6.96□□□□□ -1.3
HMG20A-212ENST00000560986 SIRT2Q8IXJ6 389 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms