RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 SLC38A10Q9HBR0 1119 aa22.22■■□□□ 1.15
TPM1-226ENST00000560959 CTAGE5O15320 804 aa22.21■■□□□ 1.15
TPM1-226ENST00000560959 CABYRO75952 493 aa22.21■■□□□ 1.15
TPM1-226ENST00000560959 NDUFB10O96000 172 aa22.21■■□□□ 1.15
TPM1-226ENST00000560959 FGBP02675 491 aa22.21■■□□□ 1.15
TPM1-226ENST00000560959 ACRP10323 421 aa22.21■■□□□ 1.15
TPM1-226ENST00000560959 IRX5P78411 483 aaPredicted RBP22.21■■□□□ 1.15
TPM1-226ENST00000560959 GIMAP6Q6P9H5 292 aa22.21■■□□□ 1.15
TPM1-226ENST00000560959 ARMCX2Q7L311 632 aa22.21■■□□□ 1.15
TPM1-226ENST00000560959 ADAMTS19Q8TE59 1207 aa22.21■■□□□ 1.15
TPM1-226ENST00000560959 FGD4Q96M96 766 aa22.21■■□□□ 1.15
TPM1-226ENST00000560959 NUP88Q99567 741 aaPredicted RBP22.21■■□□□ 1.15
TPM1-226ENST00000560959 CTDP1Q9Y5B0 961 aaPredicted RBP22.21■■□□□ 1.15
TPM1-226ENST00000560959 FDX1P10109 184 aa22.2■■□□□ 1.14
TPM1-226ENST00000560959 RASA1P20936 1047 aa22.2■■□□□ 1.14
TPM1-226ENST00000560959 CPXCR1Q8N123 301 aa22.2■■□□□ 1.14
TPM1-226ENST00000560959 UHRF1Q96T88 793 aaPredicted RBP22.2■■□□□ 1.14
TPM1-226ENST00000560959 PPP1R12CQ9BZL4 782 aa22.2■■□□□ 1.14
TPM1-226ENST00000560959 KATNBL1Q9H079 304 aa22.2■■□□□ 1.14
TPM1-226ENST00000560959 PUS7LQ9H0K6 701 aaKnown RBP22.2■■□□□ 1.14
TPM1-226ENST00000560959 SLC28A3Q9HAS3 691 aa22.2■■□□□ 1.14
TPM1-226ENST00000560959 MKNK2Q9HBH9 465 aa22.2■■□□□ 1.14
TPM1-226ENST00000560959 FEM1BQ9UK73 627 aa22.2■■□□□ 1.14
TPM1-226ENST00000560959 TSPYL2Q9H2G4 693 aaPredicted RBP22.19■■□□□ 1.14
TPM1-226ENST00000560959 BAZ2AQ9UIF9 1905 aaKnown RBP22.19■■□□□ 1.14
TPM1-226ENST00000560959 IGKV6D-41A0A0C4DH26 115 aa22.18■■□□□ 1.14
TPM1-226ENST00000560959 APBB1O00213 710 aa22.18■■□□□ 1.14
TPM1-226ENST00000560959 MS4A1P11836 297 aa22.18■■□□□ 1.14
TPM1-226ENST00000560959 IGFBP4P22692 258 aa22.18■■□□□ 1.14
TPM1-226ENST00000560959 CYP2C18P33260 490 aa22.18■■□□□ 1.14
TPM1-226ENST00000560959 CCDC144CPQ8IYA2 1237 aa22.18■■□□□ 1.14
TPM1-226ENST00000560959 IL27Q8NEV9 243 aa22.18■■□□□ 1.14
TPM1-226ENST00000560959 STRBPQ96SI9 672 aaKnown RBP22.18■■□□□ 1.14
TPM1-226ENST00000560959 HIPK3Q9H422 1215 aa22.18■■□□□ 1.14
TPM1-226ENST00000560959 RAVER2Q9HCJ3 691 aaKnown RBP22.18■■□□□ 1.14
TPM1-226ENST00000560959 CXXC1Q9P0U4 656 aaPredicted RBP22.18■■□□□ 1.14
TPM1-226ENST00000560959 CLIP2Q9UDT6 1046 aa22.18■■□□□ 1.14
TPM1-226ENST00000560959 TNFAIP2Q03169 654 aa22.17■■□□□ 1.14
TPM1-226ENST00000560959 SIRT2Q8IXJ6 389 aa22.17■■□□□ 1.14
TPM1-226ENST00000560959 PANK1Q8TE04 598 aa22.17■■□□□ 1.14
TPM1-226ENST00000560959 KIFC2Q96AC6 838 aa22.17■■□□□ 1.14
TPM1-226ENST00000560959 ZNF287Q9HBT7 754 aa22.17■■□□□ 1.14
TPM1-226ENST00000560959 GNEQ9Y223 722 aaKnown RBP22.17■■□□□ 1.14
TPM1-226ENST00000560959 CHGBP05060 677 aa22.16■■□□□ 1.14
TPM1-226ENST00000560959 SLC4A3P48751 1232 aa22.16■■□□□ 1.14
TPM1-226ENST00000560959 CCDC85BQ15834 202 aaPredicted RBP22.16■■□□□ 1.14
TPM1-226ENST00000560959 RPUSD2Q8IZ73 545 aaKnown RBP22.16■■□□□ 1.14
TPM1-226ENST00000560959 FAM133AQ8N9E0 248 aa22.16■■□□□ 1.14
TPM1-226ENST00000560959 GMCL1P1Q8NEA9 526 aa22.16■■□□□ 1.14
TPM1-226ENST00000560959 NKX2-4Q9H2Z4 354 aa22.16■■□□□ 1.14
TPM1-226ENST00000560959 GREB1LQ9C091 1923 aaPredicted RBP22.16■■□□□ 1.14
TPM1-226ENST00000560959 ASB14A6NK59 587 aa22.15■■□□□ 1.14
TPM1-226ENST00000560959 GSG1L2A8MUP6 293 aa22.15■■□□□ 1.14
TPM1-226ENST00000560959 ZEB2O60315 1214 aa22.15■■□□□ 1.14
TPM1-226ENST00000560959 ITGA7Q13683 1181 aa22.15■■□□□ 1.14
TPM1-226ENST00000560959 MTMR4Q9NYA4 1195 aa22.15■■□□□ 1.14
TPM1-226ENST00000560959 YBX2Q9Y2T7 364 aaKnown RBP22.15■■□□□ 1.14
TPM1-226ENST00000560959 Q9Y3F1 56 aa22.15■■□□□ 1.14
TPM1-226ENST00000560959 CHD7Q9P2D1 2997 aa22.15■■□□□ 1.14
TPM1-226ENST00000560959 NCOR1O75376 2440 aa22.15■■□□□ 1.14
TPM1-226ENST00000560959 MYO9BQ13459 2157 aa22.14■■□□□ 1.13
TPM1-226ENST00000560959 CXCL17Q6UXB2 119 aa22.14■■□□□ 1.13
TPM1-226ENST00000560959 ZNF444Q8N0Y2 327 aaPredicted RBP22.14■■□□□ 1.13
TPM1-226ENST00000560959 ACAD9Q9H845 621 aa22.14■■□□□ 1.13
TPM1-226ENST00000560959 ZBTB40Q9NUA8 1239 aa22.14■■□□□ 1.13
TPM1-226ENST00000560959 PCDHA11Q9Y5I1 949 aa22.14■■□□□ 1.13
TPM1-226ENST00000560959 ASTN1O14525 1302 aa22.13■■□□□ 1.13
TPM1-226ENST00000560959 TTLL1O95922 423 aa22.13■■□□□ 1.13
TPM1-226ENST00000560959 BMP1P13497 986 aa22.13■■□□□ 1.13
TPM1-226ENST00000560959 PLA2G5P39877 138 aa22.13■■□□□ 1.13
TPM1-226ENST00000560959 BEX3Q00994 111 aa22.13■■□□□ 1.13
TPM1-226ENST00000560959 CNTN2Q02246 1040 aa22.13■■□□□ 1.13
TPM1-226ENST00000560959 FSCN1Q16658 493 aaKnown RBP22.13■■□□□ 1.13
TPM1-226ENST00000560959 AAK1Q2M2I8 961 aa22.13■■□□□ 1.13
TPM1-226ENST00000560959 TKFCQ3LXA3 575 aa22.13■■□□□ 1.13
TPM1-226ENST00000560959 OTOP2Q7RTS6 562 aa22.13■■□□□ 1.13
TPM1-226ENST00000560959 NOC4LQ9BVI4 516 aaKnown RBP22.13■■□□□ 1.13
TPM1-226ENST00000560959 C1QTNF1Q9BXJ1 281 aa22.13■■□□□ 1.13
TPM1-226ENST00000560959 AP5M1Q9H0R1 490 aa22.13■■□□□ 1.13
TPM1-226ENST00000560959 SLC4A7Q9Y6M7 1214 aa22.13■■□□□ 1.13
TPM1-226ENST00000560959 XIRP2A4UGR9 3374 aa22.13■■□□□ 1.13
TPM1-226ENST00000560959 GRIN2DO15399 1336 aa22.12■■□□□ 1.13
TPM1-226ENST00000560959 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.12■■□□□ 1.13
TPM1-226ENST00000560959 BMP3P12645 472 aa22.12■■□□□ 1.13
TPM1-226ENST00000560959 POU3F3P20264 500 aaPredicted RBP22.12■■□□□ 1.13
TPM1-226ENST00000560959 IQSEC1Q6DN90 963 aa22.12■■□□□ 1.13
TPM1-226ENST00000560959 NOL8Q76FK4 1167 aaKnown RBP22.12■■□□□ 1.13
TPM1-226ENST00000560959 TLK2Q86UE8 772 aa22.12■■□□□ 1.13
TPM1-226ENST00000560959 CEP95Q96GE4 821 aa22.12■■□□□ 1.13
TPM1-226ENST00000560959 DDX19BQ9UMR2 479 aa22.12■■□□□ 1.13
TPM1-226ENST00000560959 MINDY4BA8MYZ0 360 aa22.11■■□□□ 1.13
TPM1-226ENST00000560959 PFKMP08237 780 aa22.11■■□□□ 1.13
TPM1-226ENST00000560959 GNAT2P19087 354 aa22.11■■□□□ 1.13
TPM1-226ENST00000560959 CHURC1Q8WUH1 139 aa22.11■■□□□ 1.13
TPM1-226ENST00000560959 CHMP4BQ9H444 224 aaKnown RBP22.11■■□□□ 1.13
TPM1-226ENST00000560959 A1CFQ9NQ94 594 aaKnown RBP22.11■■□□□ 1.13
TPM1-226ENST00000560959 RAPGEFL1Q9UHV5 662 aa22.11■■□□□ 1.13
TPM1-226ENST00000560959 BDP1A6H8Y1 2624 aa22.1■■□□□ 1.13
TPM1-226ENST00000560959 UMODL1Q5DID0 1318 aa22.1■■□□□ 1.13
TPM1-226ENST00000560959 SOWAHBA6NEL2 793 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 120.6 ms