RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 LETM2Q2VYF4 491 aa12.42□□□□□ -0.42
SNRPA1-211ENST00000560433 GPATCH4Q5T3I0 446 aaKnown RBP12.42□□□□□ -0.42
SNRPA1-211ENST00000560433 ANGEL2Q5VTE6 544 aaKnown RBP12.42□□□□□ -0.42
SNRPA1-211ENST00000560433 C11orf57Q6ZUT1 292 aaPredicted RBP12.42□□□□□ -0.42
SNRPA1-211ENST00000560433 FAM83AQ86UY5 434 aa12.42□□□□□ -0.42
SNRPA1-211ENST00000560433 USP25Q9UHP3 1055 aa12.42□□□□□ -0.42
SNRPA1-211ENST00000560433 HPSEQ9Y251 543 aa12.42□□□□□ -0.42
SNRPA1-211ENST00000560433 SRPRBQ9Y5M8 271 aaKnown RBP12.42□□□□□ -0.42
SNRPA1-211ENST00000560433 SMCHD1A6NHR9 2005 aa12.42□□□□□ -0.42
SNRPA1-211ENST00000560433 PNMA6FA0A0J9YX94 578 aa12.41□□□□□ -0.42
SNRPA1-211ENST00000560433 PRKG1Q13976 671 aa12.41□□□□□ -0.42
SNRPA1-211ENST00000560433 TMEM60Q9H2L4 133 aa12.41□□□□□ -0.42
SNRPA1-211ENST00000560433 C6orf50Q9HD87 102 aa12.41□□□□□ -0.42
SNRPA1-211ENST00000560433 CEP131Q9UPN4 1083 aa12.41□□□□□ -0.42
SNRPA1-211ENST00000560433 A0A087X0B3 334 aa12.41□□□□□ -0.42
SNRPA1-211ENST00000560433 ZBTB5O15062 677 aa12.41□□□□□ -0.42
SNRPA1-211ENST00000560433 CCNT1O60563 726 aaKnown RBP12.41□□□□□ -0.42
SNRPA1-211ENST00000560433 RPS12P25398 132 aaKnown RBP12.41□□□□□ -0.42
SNRPA1-211ENST00000560433 CAP2P40123 477 aa12.41□□□□□ -0.42
SNRPA1-211ENST00000560433 CDC37Q16543 378 aaPredicted RBP12.41□□□□□ -0.42
SNRPA1-211ENST00000560433 FAM83BQ5T0W9 1011 aa12.41□□□□□ -0.42
SNRPA1-211ENST00000560433 TBCKQ8TEA7 893 aa12.41□□□□□ -0.42
SNRPA1-211ENST00000560433 ARFGEF1Q9Y6D6 1849 aa12.41□□□□□ -0.42
SNRPA1-211ENST00000560433 USP17L15C9J2P7 530 aa12.4□□□□□ -0.42
SNRPA1-211ENST00000560433 USP17L13C9JLJ4 530 aa12.4□□□□□ -0.42
SNRPA1-211ENST00000560433 USP17L11C9JVI0 530 aa12.4□□□□□ -0.42
SNRPA1-211ENST00000560433 USP17L18D6R9N7 530 aa12.4□□□□□ -0.42
SNRPA1-211ENST00000560433 USP17L22D6RA61 530 aa12.4□□□□□ -0.42
SNRPA1-211ENST00000560433 USP17L17D6RBQ6 530 aa12.4□□□□□ -0.42
SNRPA1-211ENST00000560433 USP17L19D6RCP7 530 aa12.4□□□□□ -0.42
SNRPA1-211ENST00000560433 USP17L20D6RJB6 530 aa12.4□□□□□ -0.42
SNRPA1-211ENST00000560433 BMP3P12645 472 aa12.4□□□□□ -0.42
SNRPA1-211ENST00000560433 LMNB1P20700 586 aa12.4□□□□□ -0.42
SNRPA1-211ENST00000560433 SMARCA1P28370 1054 aa12.4□□□□□ -0.42
SNRPA1-211ENST00000560433 GNA11P29992 359 aa12.4□□□□□ -0.42
SNRPA1-211ENST00000560433 TNNI2P48788 182 aa12.4□□□□□ -0.42
SNRPA1-211ENST00000560433 HIRAP54198 1017 aaPredicted RBP12.4□□□□□ -0.42
SNRPA1-211ENST00000560433 USP17L24Q0WX57 530 aa12.4□□□□□ -0.42
SNRPA1-211ENST00000560433 FKBP1CQ5VVH2 108 aa12.4□□□□□ -0.42
SNRPA1-211ENST00000560433 USP17L6PQ6QN14 398 aa12.4□□□□□ -0.42
SNRPA1-211ENST00000560433 DPF2Q92785 391 aa12.4□□□□□ -0.42
SNRPA1-211ENST00000560433 SYMPKQ92797 1274 aaKnown RBP12.4□□□□□ -0.42
SNRPA1-211ENST00000560433 SERTAD1Q9UHV2 236 aa12.4□□□□□ -0.42
SNRPA1-211ENST00000560433 H7C1D1 291 aa12.4□□□□□ -0.42
SNRPA1-211ENST00000560433 AP5Z1O43299 807 aa12.4□□□□□ -0.42
SNRPA1-211ENST00000560433 CASP1P29466 404 aa12.4□□□□□ -0.42
SNRPA1-211ENST00000560433 INPP5BP32019 993 aa12.4□□□□□ -0.42
SNRPA1-211ENST00000560433 REXO1Q8N1G1 1221 aaKnown RBP12.4□□□□□ -0.42
SNRPA1-211ENST00000560433 CNNM3Q8NE01 707 aa12.4□□□□□ -0.42
SNRPA1-211ENST00000560433 CCDC12Q8WUD4 166 aaPredicted RBP12.4□□□□□ -0.42
SNRPA1-211ENST00000560433 DCAF4Q8WV16 495 aa12.4□□□□□ -0.42
SNRPA1-211ENST00000560433 STAMQ92783 540 aa12.4□□□□□ -0.42
SNRPA1-211ENST00000560433 CBX8Q9HC52 389 aa12.4□□□□□ -0.42
SNRPA1-211ENST00000560433 RNF181Q9P0P0 153 aa12.4□□□□□ -0.42
SNRPA1-211ENST00000560433 PCDHA1Q9Y5I3 950 aa12.4□□□□□ -0.42
SNRPA1-211ENST00000560433 COL2A1P02458 1487 aaPredicted RBP12.39□□□□□ -0.43
SNRPA1-211ENST00000560433 PP2D1A8MPX8 630 aa12.39□□□□□ -0.43
SNRPA1-211ENST00000560433 PHF20L1A8MW92 1017 aa12.39□□□□□ -0.43
SNRPA1-211ENST00000560433 ADCY7P51828 1080 aa12.39□□□□□ -0.43
SNRPA1-211ENST00000560433 ATP2C1P98194 919 aaPredicted RBP12.39□□□□□ -0.43
SNRPA1-211ENST00000560433 ZRSR1Q15695 479 aaKnown RBP12.39□□□□□ -0.43
SNRPA1-211ENST00000560433 DAGLBQ8NCG7 672 aa12.39□□□□□ -0.43
SNRPA1-211ENST00000560433 ANP32BQ92688 251 aaKnown RBP12.39□□□□□ -0.43
SNRPA1-211ENST00000560433 GJA10Q969M2 543 aa12.39□□□□□ -0.43
SNRPA1-211ENST00000560433 DHX58Q96C10 678 aa12.39□□□□□ -0.43
SNRPA1-211ENST00000560433 ARHGEF10LQ9HCE6 1279 aa12.39□□□□□ -0.43
SNRPA1-211ENST00000560433 FBXO28Q9NVF7 368 aa12.39□□□□□ -0.43
SNRPA1-211ENST00000560433 KIAA1468Q9P260 1216 aa12.39□□□□□ -0.43
SNRPA1-211ENST00000560433 PRR29P0C7W0 189 aa12.39□□□□□ -0.43
SNRPA1-211ENST00000560433 ZNF165P49910 485 aa12.39□□□□□ -0.43
SNRPA1-211ENST00000560433 NONOQ15233 471 aaKnown RBP eCLIP12.39□□□□□ -0.43
SNRPA1-211ENST00000560433 C4orf32Q8N8J7 132 aa12.39□□□□□ -0.43
SNRPA1-211ENST00000560433 GMCL1P1Q8NEA9 526 aa12.39□□□□□ -0.43
SNRPA1-211ENST00000560433 ZKSCAN4Q969J2 545 aaPredicted RBP12.39□□□□□ -0.43
SNRPA1-211ENST00000560433 KIFC2Q96AC6 838 aa12.39□□□□□ -0.43
SNRPA1-211ENST00000560433 PLIN2Q99541 437 aa12.39□□□□□ -0.43
SNRPA1-211ENST00000560433 ZNF341Q9BYN7 854 aa12.39□□□□□ -0.43
SNRPA1-211ENST00000560433 FAM13BQ9NYF5 915 aa12.39□□□□□ -0.43
SNRPA1-211ENST00000560433 GGA3Q9NZ52 723 aa12.39□□□□□ -0.43
SNRPA1-211ENST00000560433 GPRC5DQ9NZD1 345 aa12.39□□□□□ -0.43
SNRPA1-211ENST00000560433 AFMP43652 599 aa12.38□□□□□ -0.43
SNRPA1-211ENST00000560433 TNFAIP1Q13829 316 aa12.38□□□□□ -0.43
SNRPA1-211ENST00000560433 DPCR1Q3MIW9 517 aa12.38□□□□□ -0.43
SNRPA1-211ENST00000560433 KRBA2Q6ZNG9 492 aa12.38□□□□□ -0.43
SNRPA1-211ENST00000560433 TMX2Q9Y320 296 aa12.38□□□□□ -0.43
SNRPA1-211ENST00000560433 POLR2AP24928 1970 aaKnown RBP12.38□□□□□ -0.43
SNRPA1-211ENST00000560433 CTAGE5O15320 804 aa12.38□□□□□ -0.43
SNRPA1-211ENST00000560433 TBC1D12O60347 775 aa12.38□□□□□ -0.43
SNRPA1-211ENST00000560433 PPP4R3BQ5MIZ7 849 aa12.38□□□□□ -0.43
SNRPA1-211ENST00000560433 SYDE2Q5VT97 1194 aa12.38□□□□□ -0.43
SNRPA1-211ENST00000560433 CCDC174Q6PII3 467 aa12.38□□□□□ -0.43
SNRPA1-211ENST00000560433 FAM200AQ8TCP9 573 aa12.38□□□□□ -0.43
SNRPA1-211ENST00000560433 MTMR8Q96EF0 704 aa12.38□□□□□ -0.43
SNRPA1-211ENST00000560433 GMCL1Q96IK5 515 aa12.38□□□□□ -0.43
SNRPA1-211ENST00000560433 FEZ1Q99689 392 aa12.38□□□□□ -0.43
SNRPA1-211ENST00000560433 PSTPIP2Q9H939 334 aa12.38□□□□□ -0.43
SNRPA1-211ENST00000560433 PRR12Q9ULL5 1215 aa12.38□□□□□ -0.43
SNRPA1-211ENST00000560433 EDIL3O43854 480 aa12.37□□□□□ -0.43
SNRPA1-211ENST00000560433 TDP2O95551 362 aa12.37□□□□□ -0.43
SNRPA1-211ENST00000560433 TRAPPC10P48553 1259 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms