RNA–Protein interactions for RNA: ENST00000559941.1

CHRNA3-207, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 592 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-207ENST00000559941 PDE4AP27815 886 aa24.13■■□□□ 1.45
CHRNA3-207ENST00000559941 BMP8BP34820 402 aa24.13■■□□□ 1.45
CHRNA3-207ENST00000559941 LRRC41Q15345 812 aa24.13■■□□□ 1.45
CHRNA3-207ENST00000559941 TKFCQ3LXA3 575 aa24.13■■□□□ 1.45
CHRNA3-207ENST00000559941 TBC1D10CQ8IV04 446 aa24.13■■□□□ 1.45
CHRNA3-207ENST00000559941 AGBL1Q96MI9 1066 aa24.13■■□□□ 1.45
CHRNA3-207ENST00000559941 ACAD9Q9H845 621 aa24.13■■□□□ 1.45
CHRNA3-207ENST00000559941 MTMR7Q9Y216 660 aa24.13■■□□□ 1.45
CHRNA3-207ENST00000559941 ZNF213O14771 459 aa24.12■■□□□ 1.45
CHRNA3-207ENST00000559941 SNAI1O95863 264 aaPredicted RBP24.12■■□□□ 1.45
CHRNA3-207ENST00000559941 AKR1A1P14550 325 aa24.12■■□□□ 1.45
CHRNA3-207ENST00000559941 IRX6P78412 446 aaPredicted RBP24.12■■□□□ 1.45
CHRNA3-207ENST00000559941 FGD4Q96M96 766 aa24.12■■□□□ 1.45
CHRNA3-207ENST00000559941 TTC14Q96N46 770 aa24.12■■□□□ 1.45
CHRNA3-207ENST00000559941 XPNPEP3Q9NQH7 507 aa24.12■■□□□ 1.45
CHRNA3-207ENST00000559941 HOMER2Q9NSB8 354 aa24.12■■□□□ 1.45
CHRNA3-207ENST00000559941 PCDH10Q9P2E7 1040 aa24.12■■□□□ 1.45
CHRNA3-207ENST00000559941 ATN1P54259 1190 aaPredicted RBP24.11■■□□□ 1.45
CHRNA3-207ENST00000559941 CCDC96Q2M329 555 aa24.11■■□□□ 1.45
CHRNA3-207ENST00000559941 BTNL9Q6UXG8 535 aa24.11■■□□□ 1.45
CHRNA3-207ENST00000559941 DSCC1Q9BVC3 393 aa24.11■■□□□ 1.45
CHRNA3-207ENST00000559941 RNF146Q9NTX7 359 aa24.11■■□□□ 1.45
CHRNA3-207ENST00000559941 MYCNP04198 464 aaPredicted RBP24.1■■□□□ 1.45
CHRNA3-207ENST00000559941 MAGEA10P43363 369 aaPredicted RBP24.1■■□□□ 1.45
CHRNA3-207ENST00000559941 NT5C2P49902 561 aa24.1■■□□□ 1.45
CHRNA3-207ENST00000559941 TTBK2Q6IQ55 1244 aa24.1■■□□□ 1.45
CHRNA3-207ENST00000559941 SLC39A5Q6ZMH5 540 aa24.1■■□□□ 1.45
CHRNA3-207ENST00000559941 ESR2Q92731 530 aa24.1■■□□□ 1.45
CHRNA3-207ENST00000559941 TRERF1Q96PN7 1200 aa24.1■■□□□ 1.45
CHRNA3-207ENST00000559941 NEDD4P46934 1319 aa24.1■■□□□ 1.45
CHRNA3-207ENST00000559941 ALAS1P13196 640 aa24.09■■□□□ 1.45
CHRNA3-207ENST00000559941 ADCYAP1R1P41586 468 aa24.09■■□□□ 1.45
CHRNA3-207ENST00000559941 RTP1P59025 263 aa24.09■■□□□ 1.45
CHRNA3-207ENST00000559941 SNAP25P60880 206 aa24.09■■□□□ 1.45
CHRNA3-207ENST00000559941 TTC22Q5TAA0 569 aa24.09■■□□□ 1.45
CHRNA3-207ENST00000559941 CCDC174Q6PII3 467 aa24.09■■□□□ 1.45
CHRNA3-207ENST00000559941 FAM133AQ8N9E0 248 aa24.09■■□□□ 1.45
CHRNA3-207ENST00000559941 RANBP17Q9H2T7 1088 aaKnown RBP24.09■■□□□ 1.45
CHRNA3-207ENST00000559941 A1CFQ9NQ94 594 aaKnown RBP24.09■■□□□ 1.45
CHRNA3-207ENST00000559941 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.09■■□□□ 1.45
CHRNA3-207ENST00000559941 FAM184BQ9ULE4 1060 aa24.09■■□□□ 1.45
CHRNA3-207ENST00000559941 POTEB2H3BUK9 544 aa24.08■■□□□ 1.45
CHRNA3-207ENST00000559941 PDHBP11177 359 aa24.08■■□□□ 1.45
CHRNA3-207ENST00000559941 GSPT1P15170 499 aaKnown RBP24.08■■□□□ 1.45
CHRNA3-207ENST00000559941 CNTN2Q02246 1040 aa24.08■■□□□ 1.45
CHRNA3-207ENST00000559941 ACVR2BQ13705 512 aa24.08■■□□□ 1.45
CHRNA3-207ENST00000559941 RNF180Q86T96 592 aa24.08■■□□□ 1.45
CHRNA3-207ENST00000559941 ABHD16BQ9H3Z7 469 aa24.08■■□□□ 1.45
CHRNA3-207ENST00000559941 ZHX1Q9UKY1 873 aaPredicted RBP24.08■■□□□ 1.45
CHRNA3-207ENST00000559941 PGK1P00558 417 aa24.07■■□□□ 1.44
CHRNA3-207ENST00000559941 SLC16A2P36021 539 aa24.07■■□□□ 1.44
CHRNA3-207ENST00000559941 SNX17Q15036 470 aa24.07■■□□□ 1.44
CHRNA3-207ENST00000559941 SYDE2Q5VT97 1194 aa24.07■■□□□ 1.44
CHRNA3-207ENST00000559941 ARMCX2Q7L311 632 aa24.07■■□□□ 1.44
CHRNA3-207ENST00000559941 GPCPD1Q9NPB8 672 aa24.07■■□□□ 1.44
CHRNA3-207ENST00000559941 PHF24Q9UPV7 400 aa24.07■■□□□ 1.44
CHRNA3-207ENST00000559941 FRMPD2Q68DX3 1309 aaPredicted RBP24.07■■□□□ 1.44
CHRNA3-207ENST00000559941 ADAMTS4O75173 837 aa24.06■■□□□ 1.44
CHRNA3-207ENST00000559941 ICAM1P05362 532 aa24.06■■□□□ 1.44
CHRNA3-207ENST00000559941 SNHG28P0DPA3 235 aa24.06■■□□□ 1.44
CHRNA3-207ENST00000559941 DGKHQ86XP1 1220 aa24.06■■□□□ 1.44
CHRNA3-207ENST00000559941 FERMT2Q96AC1 680 aa24.06■■□□□ 1.44
CHRNA3-207ENST00000559941 CTNNA3Q9UI47 895 aa24.06■■□□□ 1.44
CHRNA3-207ENST00000559941 CCPG1Q9ULG6 757 aa24.06■■□□□ 1.44
CHRNA3-207ENST00000559941 ATP11BQ9Y2G3 1177 aa24.06■■□□□ 1.44
CHRNA3-207ENST00000559941 SZT2Q5T011 3432 aa24.06■■□□□ 1.44
CHRNA3-207ENST00000559941 LCTP09848 1927 aa24.06■■□□□ 1.44
CHRNA3-207ENST00000559941 ZNF543Q08ER8 600 aa24.05■■□□□ 1.44
CHRNA3-207ENST00000559941 IMMTQ16891 758 aaKnown RBP24.05■■□□□ 1.44
CHRNA3-207ENST00000559941 CCDC178Q5BJE1 867 aa24.05■■□□□ 1.44
CHRNA3-207ENST00000559941 MUM1L1Q5H9M0 696 aa24.05■■□□□ 1.44
CHRNA3-207ENST00000559941 C1orf53Q5VUE5 145 aa24.05■■□□□ 1.44
CHRNA3-207ENST00000559941 CCDC144CPQ8IYA2 1237 aa24.05■■□□□ 1.44
CHRNA3-207ENST00000559941 LENG1Q96BZ8 264 aaPredicted RBP24.05■■□□□ 1.44
CHRNA3-207ENST00000559941 ZKSCAN3Q9BRR0 538 aa24.05■■□□□ 1.44
CHRNA3-207ENST00000559941 IL25Q9H293 177 aa24.05■■□□□ 1.44
CHRNA3-207ENST00000559941 SOWAHBA6NEL2 793 aa24.04■■□□□ 1.44
CHRNA3-207ENST00000559941 KDM4AO75164 1064 aa24.04■■□□□ 1.44
CHRNA3-207ENST00000559941 DUSP11O75319 330 aaKnown RBP24.04■■□□□ 1.44
CHRNA3-207ENST00000559941 IQCA1Q86XH1 822 aa24.04■■□□□ 1.44
CHRNA3-207ENST00000559941 KLHDC9Q8NEP7 349 aa24.04■■□□□ 1.44
CHRNA3-207ENST00000559941 TSEN34Q9BSV6 310 aaKnown RBP24.04■■□□□ 1.44
CHRNA3-207ENST00000559941 UBE2OQ9C0C9 1292 aaKnown RBP24.04■■□□□ 1.44
CHRNA3-207ENST00000559941 KATNBL1Q9H079 304 aa24.04■■□□□ 1.44
CHRNA3-207ENST00000559941 CYP39A1Q9NYL5 469 aa24.04■■□□□ 1.44
CHRNA3-207ENST00000559941 LTBP2Q14767 1821 aa24.03■■□□□ 1.44
CHRNA3-207ENST00000559941 ASB14A6NK59 587 aa24.03■■□□□ 1.44
CHRNA3-207ENST00000559941 B4E1Z4 1266 aa24.03■■□□□ 1.44
CHRNA3-207ENST00000559941 CCDC144BQ3MJ40 725 aa24.03■■□□□ 1.44
CHRNA3-207ENST00000559941 ANKS1AQ92625 1134 aa24.03■■□□□ 1.44
CHRNA3-207ENST00000559941 PRKAG2Q9UGJ0 569 aa24.03■■□□□ 1.44
CHRNA3-207ENST00000559941 RAD50Q92878 1312 aa24.03■■□□□ 1.44
CHRNA3-207ENST00000559941 SYNRGQ9UMZ2 1314 aa24.03■■□□□ 1.44
CHRNA3-207ENST00000559941 MDM2Q00987 491 aaPredicted RBP24.02■■□□□ 1.44
CHRNA3-207ENST00000559941 TRIM60Q495X7 471 aa24.02■■□□□ 1.44
CHRNA3-207ENST00000559941 TDHQ8IZJ6 230 aa24.02■■□□□ 1.44
CHRNA3-207ENST00000559941 ZSWIM5Q9P217 1185 aa24.02■■□□□ 1.44
CHRNA3-207ENST00000559941 LAMA3Q16787 3333 aa24.02■■□□□ 1.44
CHRNA3-207ENST00000559941 LRRC37A2A6NM11 1700 aa24.01■■□□□ 1.43
CHRNA3-207ENST00000559941 SOX1O00570 391 aaPredicted RBP24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms