RNA–Protein interactions for RNA: ENST00000559931.5

SMAD6-204, Transcript of SMAD family member 6, humanhuman

TSL 3

Gene SMAD6, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-204ENST00000559931 CDC37Q16543 378 aaPredicted RBP16.61■□□□□ 0.25
SMAD6-204ENST00000559931 CCAR1Q8IX12 1150 aaKnown RBP16.61■□□□□ 0.25
SMAD6-204ENST00000559931 ANKRD13CQ8N6S4 541 aa16.61■□□□□ 0.25
SMAD6-204ENST00000559931 SLC38A10Q9HBR0 1119 aa16.61■□□□□ 0.25
SMAD6-204ENST00000559931 RAVER2Q9HCJ3 691 aaKnown RBP16.61■□□□□ 0.25
SMAD6-204ENST00000559931 CPA4Q9UI42 421 aa16.61■□□□□ 0.25
SMAD6-204ENST00000559931 ADAMTS5Q9UNA0 930 aa16.61■□□□□ 0.25
SMAD6-204ENST00000559931 RABGAP1Q9Y3P9 1069 aa16.61■□□□□ 0.25
SMAD6-204ENST00000559931 NID2Q14112 1375 aa16.61■□□□□ 0.25
SMAD6-204ENST00000559931 RLFQ13129 1914 aa16.6■□□□□ 0.25
SMAD6-204ENST00000559931 PNMA6FA0A0J9YX94 578 aa16.6■□□□□ 0.25
SMAD6-204ENST00000559931 TLR2O60603 784 aa16.6■□□□□ 0.25
SMAD6-204ENST00000559931 DTNBO60941 627 aa16.6■□□□□ 0.25
SMAD6-204ENST00000559931 NTRK3Q16288 839 aa16.6■□□□□ 0.25
SMAD6-204ENST00000559931 SLC35G1Q2M3R5 365 aa16.6■□□□□ 0.25
SMAD6-204ENST00000559931 QRICH1Q2TAL8 776 aa16.6■□□□□ 0.25
SMAD6-204ENST00000559931 GPRC5AQ8NFJ5 357 aa16.6■□□□□ 0.25
SMAD6-204ENST00000559931 DDX11Q96FC9 970 aa16.6■□□□□ 0.25
SMAD6-204ENST00000559931 RANBP17Q9H2T7 1088 aaKnown RBP16.6■□□□□ 0.25
SMAD6-204ENST00000559931 TSHZ2Q9NRE2 1034 aa16.6■□□□□ 0.25
SMAD6-204ENST00000559931 RBPJLQ9UBG7 517 aa16.6■□□□□ 0.25
SMAD6-204ENST00000559931 COL11A1P12107 1806 aaPredicted RBP16.6■□□□□ 0.25
SMAD6-204ENST00000559931 ZBTB5O15062 677 aa16.59■□□□□ 0.25
SMAD6-204ENST00000559931 PRPF3O43395 683 aaKnown RBP16.59■□□□□ 0.25
SMAD6-204ENST00000559931 PEX10O60683 326 aa16.59■□□□□ 0.25
SMAD6-204ENST00000559931 STAT3P40763 770 aa16.59■□□□□ 0.25
SMAD6-204ENST00000559931 FUT2Q10981 343 aa16.59■□□□□ 0.25
SMAD6-204ENST00000559931 TMEM132BQ14DG7 1078 aa16.59■□□□□ 0.25
SMAD6-204ENST00000559931 USH1GQ495M9 461 aa16.59■□□□□ 0.25
SMAD6-204ENST00000559931 LBX2Q6XYB7 198 aa16.59■□□□□ 0.25
SMAD6-204ENST00000559931 FBXO11Q86XK2 927 aa16.59■□□□□ 0.25
SMAD6-204ENST00000559931 LLPHQ9BRT6 129 aaKnown RBP16.59■□□□□ 0.25
SMAD6-204ENST00000559931 CWC22Q9HCG8 908 aaKnown RBP16.59■□□□□ 0.25
SMAD6-204ENST00000559931 BTBD7Q9P203 1132 aa16.59■□□□□ 0.25
SMAD6-204ENST00000559931 RBM27Q9P2N5 1060 aaKnown RBP16.59■□□□□ 0.25
SMAD6-204ENST00000559931 CCPG1Q9ULG6 757 aa16.59■□□□□ 0.25
SMAD6-204ENST00000559931 CNTNAP5Q8WYK1 1306 aa16.59■□□□□ 0.25
SMAD6-204ENST00000559931 FMNL1O95466 1100 aaPredicted RBP16.58■□□□□ 0.24
SMAD6-204ENST00000559931 HSPA8P11142 646 aaKnown RBP16.58■□□□□ 0.24
SMAD6-204ENST00000559931 CTCFP49711 727 aaPredicted RBP16.58■□□□□ 0.24
SMAD6-204ENST00000559931 LBX1P52954 281 aa16.58■□□□□ 0.24
SMAD6-204ENST00000559931 CCNA1P78396 465 aa16.58■□□□□ 0.24
SMAD6-204ENST00000559931 TRAF1Q13077 416 aa16.58■□□□□ 0.24
SMAD6-204ENST00000559931 WDR78Q5VTH9 848 aa16.58■□□□□ 0.24
SMAD6-204ENST00000559931 SNRNP48Q6IEG0 339 aaKnown RBP16.58■□□□□ 0.24
SMAD6-204ENST00000559931 AGBL1Q96MI9 1066 aa16.58■□□□□ 0.24
SMAD6-204ENST00000559931 AMNQ9BXJ7 453 aa16.58■□□□□ 0.24
SMAD6-204ENST00000559931 RNF26Q9BY78 433 aaPredicted RBP16.58■□□□□ 0.24
SMAD6-204ENST00000559931 R3HDMLQ9H3Y0 253 aa16.58■□□□□ 0.24
SMAD6-204ENST00000559931 TXNRD2Q9NNW7 524 aa16.58■□□□□ 0.24
SMAD6-204ENST00000559931 FOXD4L1Q9NU39 408 aa16.58■□□□□ 0.24
SMAD6-204ENST00000559931 SAGE1Q9NXZ1 904 aa16.58■□□□□ 0.24
SMAD6-204ENST00000559931 ORC3Q9UBD5 711 aaPredicted RBP16.58■□□□□ 0.24
SMAD6-204ENST00000559931 DAXXQ9UER7 740 aaPredicted RBP16.58■□□□□ 0.24
SMAD6-204ENST00000559931 PNMA2Q9UL42 364 aa16.58■□□□□ 0.24
SMAD6-204ENST00000559931 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.58■□□□□ 0.24
SMAD6-204ENST00000559931 PTPDC1A2A3K4 754 aa16.57■□□□□ 0.24
SMAD6-204ENST00000559931 JAK2O60674 1132 aa16.57■□□□□ 0.24
SMAD6-204ENST00000559931 ECM2O94769 699 aaPredicted RBP16.57■□□□□ 0.24
SMAD6-204ENST00000559931 CTDNEP1O95476 244 aa16.57■□□□□ 0.24
SMAD6-204ENST00000559931 ICAM1P05362 532 aa16.57■□□□□ 0.24
SMAD6-204ENST00000559931 ALAS1P13196 640 aa16.57■□□□□ 0.24
SMAD6-204ENST00000559931 OAZ1P54368 228 aa16.57■□□□□ 0.24
SMAD6-204ENST00000559931 ERVK-9P63128 1117 aa16.57■□□□□ 0.24
SMAD6-204ENST00000559931 ERVK-24P63145 666 aa16.57■□□□□ 0.24
SMAD6-204ENST00000559931 ST3GAL1Q11201 340 aa16.57■□□□□ 0.24
SMAD6-204ENST00000559931 Q3C1V9 767 aa16.57■□□□□ 0.24
SMAD6-204ENST00000559931 POTEEQ6S8J3 1075 aa16.57■□□□□ 0.24
SMAD6-204ENST00000559931 HEATR3Q7Z4Q2 680 aa16.57■□□□□ 0.24
SMAD6-204ENST00000559931 NCAPG2Q86XI2 1143 aa16.57■□□□□ 0.24
SMAD6-204ENST00000559931 FAM184AQ8NB25 1140 aa16.57■□□□□ 0.24
SMAD6-204ENST00000559931 NSUN7Q8NE18 718 aaKnown RBP16.57■□□□□ 0.24
SMAD6-204ENST00000559931 MTMR8Q96EF0 704 aa16.57■□□□□ 0.24
SMAD6-204ENST00000559931 TEX13BQ9BXU2 312 aa16.57■□□□□ 0.24
SMAD6-204ENST00000559931 SPATC1LQ9H0A9 340 aa16.57■□□□□ 0.24
SMAD6-204ENST00000559931 HOMER2Q9NSB8 354 aa16.57■□□□□ 0.24
SMAD6-204ENST00000559931 SMC3Q9UQE7 1217 aa16.57■□□□□ 0.24
SMAD6-204ENST00000559931 RBM19Q9Y4C8 960 aaKnown RBP16.57■□□□□ 0.24
SMAD6-204ENST00000559931 PCDHA1Q9Y5I3 950 aa16.57■□□□□ 0.24
SMAD6-204ENST00000559931 CNMDO75829 334 aa16.56■□□□□ 0.24
SMAD6-204ENST00000559931 DEXIO95424 95 aa16.56■□□□□ 0.24
SMAD6-204ENST00000559931 SCG2P13521 617 aa16.56■□□□□ 0.24
SMAD6-204ENST00000559931 FAM110CQ1W6H9 321 aa16.56■□□□□ 0.24
SMAD6-204ENST00000559931 C17orf99Q6UX52 265 aa16.56■□□□□ 0.24
SMAD6-204ENST00000559931 SPRYD3Q8NCJ5 442 aa16.56■□□□□ 0.24
SMAD6-204ENST00000559931 REPS2Q8NFH8 660 aa16.56■□□□□ 0.24
SMAD6-204ENST00000559931 WASF1Q92558 559 aa16.56■□□□□ 0.24
SMAD6-204ENST00000559931 COA7Q96BR5 231 aa16.56■□□□□ 0.24
SMAD6-204ENST00000559931 MOV10L1Q9BXT6 1211 aaKnown RBP16.56■□□□□ 0.24
SMAD6-204ENST00000559931 ZNF214Q9UL59 606 aaPredicted RBP16.56■□□□□ 0.24
SMAD6-204ENST00000559931 SMCHD1A6NHR9 2005 aa16.56■□□□□ 0.24
SMAD6-204ENST00000559931 ZNF536O15090 1300 aa16.55■□□□□ 0.24
SMAD6-204ENST00000559931 ATP2A1O14983 1001 aa16.55■□□□□ 0.24
SMAD6-204ENST00000559931 HMGN5P82970 282 aaKnown RBP16.55■□□□□ 0.24
SMAD6-204ENST00000559931 CUL4AQ13619 759 aa16.55■□□□□ 0.24
SMAD6-204ENST00000559931 PFKFB3Q16875 520 aaPredicted RBP16.55■□□□□ 0.24
SMAD6-204ENST00000559931 RIOX2Q8IUF8 465 aa16.55■□□□□ 0.24
SMAD6-204ENST00000559931 GPKOWQ92917 476 aaPredicted RBP eCLIP16.55■□□□□ 0.24
SMAD6-204ENST00000559931 TRERF1Q96PN7 1200 aa16.55■□□□□ 0.24
SMAD6-204ENST00000559931 MORF4L1Q9UBU8 362 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms