RNA–Protein interactions for RNA: ENST00000559866.1

AC243562.3-201, humanhuman

TSL 1 (best) BASIC

Gene AC243562.3, Length 1,212 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC243562.3-201ENST00000559866 KANSL2Q9H9L4 492 aa18.78■□□□□ 0.6
AC243562.3-201ENST00000559866 DDX49Q9Y6V7 483 aaKnown RBP18.78■□□□□ 0.6
AC243562.3-201ENST00000559866 NDUFB10O96000 172 aa18.77■□□□□ 0.6
AC243562.3-201ENST00000559866 KCNQ1P51787 676 aa18.77■□□□□ 0.6
AC243562.3-201ENST00000559866 RAB30Q15771 203 aa18.77■□□□□ 0.6
AC243562.3-201ENST00000559866 ARMCX2Q7L311 632 aa18.77■□□□□ 0.6
AC243562.3-201ENST00000559866 OTOP2Q7RTS6 562 aa18.77■□□□□ 0.6
AC243562.3-201ENST00000559866 ZNF467Q7Z7K2 595 aaPredicted RBP18.77■□□□□ 0.6
AC243562.3-201ENST00000559866 CPXCR1Q8N123 301 aa18.77■□□□□ 0.6
AC243562.3-201ENST00000559866 STK11IPQ8N1F8 1099 aa18.77■□□□□ 0.6
AC243562.3-201ENST00000559866 PCSK9Q8NBP7 692 aaKnown RBP18.77■□□□□ 0.6
AC243562.3-201ENST00000559866 VTI1AQ96AJ9 217 aa18.77■□□□□ 0.6
AC243562.3-201ENST00000559866 BCL11AQ9H165 835 aa18.77■□□□□ 0.6
AC243562.3-201ENST00000559866 WNT8AQ9H1J5 351 aa18.77■□□□□ 0.6
AC243562.3-201ENST00000559866 RAVER2Q9HCJ3 691 aaKnown RBP18.77■□□□□ 0.6
AC243562.3-201ENST00000559866 PAG1Q9NWQ8 432 aa18.77■□□□□ 0.6
AC243562.3-201ENST00000559866 GRIN2DO15399 1336 aa18.76■□□□□ 0.59
AC243562.3-201ENST00000559866 TANC1Q9C0D5 1861 aa18.76■□□□□ 0.59
AC243562.3-201ENST00000559866 BMP1P13497 986 aa18.76■□□□□ 0.59
AC243562.3-201ENST00000559866 HNRNPUQ00839 825 aaKnown RBP eCLIP18.76■□□□□ 0.59
AC243562.3-201ENST00000559866 GNASQ5JWF2 1037 aa18.76■□□□□ 0.59
AC243562.3-201ENST00000559866 MICALL1Q8N3F8 863 aa18.76■□□□□ 0.59
AC243562.3-201ENST00000559866 FAM122AQ96E09 287 aa18.76■□□□□ 0.59
AC243562.3-201ENST00000559866 MSRAQ9UJ68 235 aa18.76■□□□□ 0.59
AC243562.3-201ENST00000559866 MYO9BQ13459 2157 aa18.75■□□□□ 0.59
AC243562.3-201ENST00000559866 RASA1P20936 1047 aa18.75■□□□□ 0.59
AC243562.3-201ENST00000559866 CCL23P55773 120 aa18.75■□□□□ 0.59
AC243562.3-201ENST00000559866 CNTN2Q02246 1040 aa18.75■□□□□ 0.59
AC243562.3-201ENST00000559866 HSP90AB4PQ58FF6 505 aa18.75■□□□□ 0.59
AC243562.3-201ENST00000559866 TMEM63BQ5T3F8 832 aa18.75■□□□□ 0.59
AC243562.3-201ENST00000559866 CCDC174Q6PII3 467 aa18.75■□□□□ 0.59
AC243562.3-201ENST00000559866 CXCL17Q6UXB2 119 aa18.75■□□□□ 0.59
AC243562.3-201ENST00000559866 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.75■□□□□ 0.59
AC243562.3-201ENST00000559866 CCDC144CPQ8IYA2 1237 aa18.75■□□□□ 0.59
AC243562.3-201ENST00000559866 SLC43A3Q8NBI5 491 aa18.75■□□□□ 0.59
AC243562.3-201ENST00000559866 BOLA2Q9H3K6 86 aa18.75■□□□□ 0.59
AC243562.3-201ENST00000559866 ABHD16BQ9H3Z7 469 aa18.75■□□□□ 0.59
AC243562.3-201ENST00000559866 SLC28A3Q9HAS3 691 aa18.75■□□□□ 0.59
AC243562.3-201ENST00000559866 SLC4A4Q9Y6R1 1079 aa18.75■□□□□ 0.59
AC243562.3-201ENST00000559866 F5H6K3 240 aa18.74■□□□□ 0.59
AC243562.3-201ENST00000559866 RFXAPO00287 272 aa18.74■□□□□ 0.59
AC243562.3-201ENST00000559866 ATP2A1O14983 1001 aa18.74■□□□□ 0.59
AC243562.3-201ENST00000559866 TLR3O15455 904 aaKnown RBP18.74■□□□□ 0.59
AC243562.3-201ENST00000559866 FGBP02675 491 aa18.74■□□□□ 0.59
AC243562.3-201ENST00000559866 NKX3-2P78367 333 aa18.74■□□□□ 0.59
AC243562.3-201ENST00000559866 KLRC3Q07444 240 aa18.74■□□□□ 0.59
AC243562.3-201ENST00000559866 PUS7LQ9H0K6 701 aaKnown RBP18.74■□□□□ 0.59
AC243562.3-201ENST00000559866 HIPK3Q9H422 1215 aa18.74■□□□□ 0.59
AC243562.3-201ENST00000559866 KIFC2Q96AC6 838 aa18.73■□□□□ 0.59
AC243562.3-201ENST00000559866 SCLYQ96I15 445 aa18.73■□□□□ 0.59
AC243562.3-201ENST00000559866 NOC4LQ9BVI4 516 aaKnown RBP18.73■□□□□ 0.59
AC243562.3-201ENST00000559866 TRPV6Q9H1D0 765 aa18.73■□□□□ 0.59
AC243562.3-201ENST00000559866 SLC38A10Q9HBR0 1119 aa18.73■□□□□ 0.59
AC243562.3-201ENST00000559866 EPOPA6NHQ4 379 aa18.72■□□□□ 0.59
AC243562.3-201ENST00000559866 B4GALT4O60513 344 aa18.72■□□□□ 0.59
AC243562.3-201ENST00000559866 HOXD11P31277 338 aaPredicted RBP18.72■□□□□ 0.59
AC243562.3-201ENST00000559866 PSMC6P62333 389 aa18.72■□□□□ 0.59
AC243562.3-201ENST00000559866 PPP2R2DQ66LE6 453 aa18.72■□□□□ 0.59
AC243562.3-201ENST00000559866 KRT40Q6A162 431 aa18.72■□□□□ 0.59
AC243562.3-201ENST00000559866 SIRT2Q8IXJ6 389 aa18.72■□□□□ 0.59
AC243562.3-201ENST00000559866 ANKRD35Q8N283 1001 aa18.72■□□□□ 0.59
AC243562.3-201ENST00000559866 CLASRPQ8N2M8 674 aaKnown RBP18.72■□□□□ 0.59
AC243562.3-201ENST00000559866 PRPF38AQ8NAV1 312 aaKnown RBP18.72■□□□□ 0.59
AC243562.3-201ENST00000559866 PANK1Q8TE04 598 aa18.72■□□□□ 0.59
AC243562.3-201ENST00000559866 HOMER2Q9NSB8 354 aa18.72■□□□□ 0.59
AC243562.3-201ENST00000559866 NYAP2Q9P242 653 aa18.72■□□□□ 0.59
AC243562.3-201ENST00000559866 GNEQ9Y223 722 aaKnown RBP18.72■□□□□ 0.59
AC243562.3-201ENST00000559866 IGKV6D-41A0A0C4DH26 115 aa18.71■□□□□ 0.59
AC243562.3-201ENST00000559866 SOWAHBA6NEL2 793 aa18.71■□□□□ 0.59
AC243562.3-201ENST00000559866 ARHGEF15O94989 841 aa18.71■□□□□ 0.59
AC243562.3-201ENST00000559866 IFIT2P09913 472 aaKnown RBP18.71■□□□□ 0.59
AC243562.3-201ENST00000559866 ITGA7Q13683 1181 aa18.71■□□□□ 0.59
AC243562.3-201ENST00000559866 TLK2Q86UE8 772 aa18.71■□□□□ 0.59
AC243562.3-201ENST00000559866 IL27Q8NEV9 243 aa18.71■□□□□ 0.59
AC243562.3-201ENST00000559866 EPHX3Q9H6B9 360 aa18.71■□□□□ 0.59
AC243562.3-201ENST00000559866 SPC25Q9HBM1 224 aa18.71■□□□□ 0.59
AC243562.3-201ENST00000559866 RBAK-RBAKDNI3L0D1 243 aa18.7■□□□□ 0.58
AC243562.3-201ENST00000559866 MS4A1P11836 297 aa18.7■□□□□ 0.58
AC243562.3-201ENST00000559866 TNFAIP2Q03169 654 aa18.7■□□□□ 0.58
AC243562.3-201ENST00000559866 UBE3CQ15386 1083 aa18.7■□□□□ 0.58
AC243562.3-201ENST00000559866 AMOTL1Q8IY63 956 aa18.7■□□□□ 0.58
AC243562.3-201ENST00000559866 LRRC47Q8N1G4 583 aaKnown RBP18.7■□□□□ 0.58
AC243562.3-201ENST00000559866 FAM133AQ8N9E0 248 aa18.7■□□□□ 0.58
AC243562.3-201ENST00000559866 KHSRPQ92945 711 aaKnown RBP eCLIP18.7■□□□□ 0.58
AC243562.3-201ENST00000559866 KIF1BPQ96EK5 621 aa18.7■□□□□ 0.58
AC243562.3-201ENST00000559866 AGBL1Q96MI9 1066 aa18.7■□□□□ 0.58
AC243562.3-201ENST00000559866 HAUS7Q99871 368 aa18.7■□□□□ 0.58
AC243562.3-201ENST00000559866 PDGFCQ9NRA1 345 aa18.7■□□□□ 0.58
AC243562.3-201ENST00000559866 ARPP21Q9UBL0 812 aaPredicted RBP18.7■□□□□ 0.58
AC243562.3-201ENST00000559866 CLIP2Q9UDT6 1046 aa18.7■□□□□ 0.58
AC243562.3-201ENST00000559866 ZBED4O75132 1171 aa18.69■□□□□ 0.58
AC243562.3-201ENST00000559866 SMPD1P17405 629 aa18.69■□□□□ 0.58
AC243562.3-201ENST00000559866 ATP5JP18859 108 aa18.69■□□□□ 0.58
AC243562.3-201ENST00000559866 TTLL4Q14679 1199 aa18.69■□□□□ 0.58
AC243562.3-201ENST00000559866 CERS4Q9HA82 394 aa18.69■□□□□ 0.58
AC243562.3-201ENST00000559866 A1CFQ9NQ94 594 aaKnown RBP18.69■□□□□ 0.58
AC243562.3-201ENST00000559866 ZNF536O15090 1300 aa18.69■□□□□ 0.58
AC243562.3-201ENST00000559866 GSG1L2A8MUP6 293 aa18.68■□□□□ 0.58
AC243562.3-201ENST00000559866 FSCN1Q16658 493 aaKnown RBP18.68■□□□□ 0.58
AC243562.3-201ENST00000559866 SPRED2Q7Z698 418 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms