RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 COG2Q14746 738 aa12.03□□□□□ -0.48
TPM1-221ENST00000559831 USH1GQ495M9 461 aa12.03□□□□□ -0.48
TPM1-221ENST00000559831 KRT40Q6A162 431 aa12.03□□□□□ -0.48
TPM1-221ENST00000559831 MCTP1Q6DN14 999 aa12.03□□□□□ -0.48
TPM1-221ENST00000559831 GPAT2Q6NUI2 795 aa12.03□□□□□ -0.48
TPM1-221ENST00000559831 FBXO11Q86XK2 927 aa12.03□□□□□ -0.48
TPM1-221ENST00000559831 COA7Q96BR5 231 aa12.03□□□□□ -0.48
TPM1-221ENST00000559831 MTMR8Q96EF0 704 aa12.03□□□□□ -0.48
TPM1-221ENST00000559831 MS4A4AQ96JQ5 239 aa12.03□□□□□ -0.48
TPM1-221ENST00000559831 RANBP17Q9H2T7 1088 aaKnown RBP12.03□□□□□ -0.48
TPM1-221ENST00000559831 KCNJ14Q9UNX9 436 aa12.03□□□□□ -0.48
TPM1-221ENST00000559831 A0A0G2JMZ2 1700 aa12.03□□□□□ -0.48
TPM1-221ENST00000559831 RBBP6Q7Z6E9 1792 aaKnown RBP12.02□□□□□ -0.48
TPM1-221ENST00000559831 hCG_1984214I3L0E3 225 aa12.02□□□□□ -0.49
TPM1-221ENST00000559831 STXBP3O00186 592 aa12.02□□□□□ -0.49
TPM1-221ENST00000559831 PPP1R11O60927 126 aaPredicted RBP12.02□□□□□ -0.49
TPM1-221ENST00000559831 OSBPP22059 807 aa12.02□□□□□ -0.49
TPM1-221ENST00000559831 NLRP5P59047 1200 aa12.02□□□□□ -0.49
TPM1-221ENST00000559831 GNL2Q13823 731 aaKnown RBP12.02□□□□□ -0.49
TPM1-221ENST00000559831 ZNF713Q8N859 430 aaPredicted RBP12.02□□□□□ -0.49
TPM1-221ENST00000559831 CCDC148Q8NFR7 591 aa12.02□□□□□ -0.49
TPM1-221ENST00000559831 FBXO18Q8NFZ0 1043 aa12.02□□□□□ -0.49
TPM1-221ENST00000559831 BRI3BPQ8WY22 251 aa12.02□□□□□ -0.49
TPM1-221ENST00000559831 AMNQ9BXJ7 453 aa12.02□□□□□ -0.49
TPM1-221ENST00000559831 ASCC2Q9H1I8 757 aaPredicted RBP12.02□□□□□ -0.49
TPM1-221ENST00000559831 BARHL2Q9NY43 387 aa12.02□□□□□ -0.49
TPM1-221ENST00000559831 MTMR6Q9Y217 621 aa12.02□□□□□ -0.49
TPM1-221ENST00000559831 WDR33Q9C0J8 1336 aaKnown RBP12.02□□□□□ -0.49
TPM1-221ENST00000559831 MANSC4A6NHS7 340 aaPredicted RBP12.01□□□□□ -0.49
TPM1-221ENST00000559831 SPDYE16A6NNV3 312 aaPredicted RBP12.01□□□□□ -0.49
TPM1-221ENST00000559831 BTBD19C9JJ37 291 aa12.01□□□□□ -0.49
TPM1-221ENST00000559831 VWA5AO00534 786 aa12.01□□□□□ -0.49
TPM1-221ENST00000559831 BRD1O95696 1058 aa12.01□□□□□ -0.49
TPM1-221ENST00000559831 ZSCAN22P10073 491 aaPredicted RBP12.01□□□□□ -0.49
TPM1-221ENST00000559831 HOXA7P31268 230 aaPredicted RBP12.01□□□□□ -0.49
TPM1-221ENST00000559831 SAFBQ15424 915 aaKnown RBP eCLIP12.01□□□□□ -0.49
TPM1-221ENST00000559831 CYP4F22Q6NT55 531 aa12.01□□□□□ -0.49
TPM1-221ENST00000559831 TYW1BQ6NUM6 668 aa12.01□□□□□ -0.49
TPM1-221ENST00000559831 FERMT3Q86UX7 667 aa12.01□□□□□ -0.49
TPM1-221ENST00000559831 CPXCR1Q8N123 301 aa12.01□□□□□ -0.49
TPM1-221ENST00000559831 CCDC12Q8WUD4 166 aaPredicted RBP12.01□□□□□ -0.49
TPM1-221ENST00000559831 CCDC102AQ96A19 550 aa12.01□□□□□ -0.49
TPM1-221ENST00000559831 SHISA4Q96DD7 197 aa12.01□□□□□ -0.49
TPM1-221ENST00000559831 P2RX7Q99572 595 aaKnown RBP12.01□□□□□ -0.49
TPM1-221ENST00000559831 SLC38A10Q9HBR0 1119 aa12.01□□□□□ -0.49
TPM1-221ENST00000559831 RAVER2Q9HCJ3 691 aaKnown RBP12.01□□□□□ -0.49
TPM1-221ENST00000559831 SH3GLB2Q9NR46 395 aa12.01□□□□□ -0.49
TPM1-221ENST00000559831 CREBZFQ9NS37 354 aa12.01□□□□□ -0.49
TPM1-221ENST00000559831 HOXC10Q9NYD6 342 aa12.01□□□□□ -0.49
TPM1-221ENST00000559831 CCPG1Q9ULG6 757 aa12.01□□□□□ -0.49
TPM1-221ENST00000559831 PCDHA1Q9Y5I3 950 aa12.01□□□□□ -0.49
TPM1-221ENST00000559831 MYPNQ86TC9 1320 aa12.01□□□□□ -0.49
TPM1-221ENST00000559831 TCHHQ07283 1943 aa12.01□□□□□ -0.49
TPM1-221ENST00000559831 SMCO2A6NFE2 343 aa12□□□□□ -0.49
TPM1-221ENST00000559831 FAM155AB1AL88 458 aaPredicted RBP12□□□□□ -0.49
TPM1-221ENST00000559831 PDHXO00330 501 aa12□□□□□ -0.49
TPM1-221ENST00000559831 F13A1P00488 732 aa12□□□□□ -0.49
TPM1-221ENST00000559831 MMP1P03956 469 aa12□□□□□ -0.49
TPM1-221ENST00000559831 ICAM1P05362 532 aa12□□□□□ -0.49
TPM1-221ENST00000559831 FDX1P10109 184 aa12□□□□□ -0.49
TPM1-221ENST00000559831 PDIA4P13667 645 aaKnown RBP12□□□□□ -0.49
TPM1-221ENST00000559831 KRT2P35908 639 aa12□□□□□ -0.49
TPM1-221ENST00000559831 PLS1Q14651 629 aa12□□□□□ -0.49
TPM1-221ENST00000559831 PPP1R18Q6NYC8 613 aa12□□□□□ -0.49
TPM1-221ENST00000559831 ANKRD23Q86SG2 305 aa12□□□□□ -0.49
TPM1-221ENST00000559831 HHIPL1Q96JK4 782 aa12□□□□□ -0.49
TPM1-221ENST00000559831 AGBL1Q96MI9 1066 aa12□□□□□ -0.49
TPM1-221ENST00000559831 PAGR1Q9BTK6 254 aa12□□□□□ -0.49
TPM1-221ENST00000559831 PHF20Q9BVI0 1012 aa12□□□□□ -0.49
TPM1-221ENST00000559831 BRMS1Q9HCU9 246 aa12□□□□□ -0.49
TPM1-221ENST00000559831 PNMA3Q9UL41 463 aa12□□□□□ -0.49
TPM1-221ENST00000559831 ZDHHC9Q9Y397 364 aa12□□□□□ -0.49
TPM1-221ENST00000559831 CYP2C8P10632 490 aa11.99□□□□□ -0.49
TPM1-221ENST00000559831 ALAS1P13196 640 aa11.99□□□□□ -0.49
TPM1-221ENST00000559831 CALML3P27482 149 aa11.99□□□□□ -0.49
TPM1-221ENST00000559831 ADCY7P51828 1080 aa11.99□□□□□ -0.49
TPM1-221ENST00000559831 HERVK_113P62684 666 aa11.99□□□□□ -0.49
TPM1-221ENST00000559831 TRAF1Q13077 416 aa11.99□□□□□ -0.49
TPM1-221ENST00000559831 DEFB115Q30KQ5 88 aa11.99□□□□□ -0.49
TPM1-221ENST00000559831 FOXD4L6Q3SYB3 417 aaPredicted RBP11.99□□□□□ -0.49
TPM1-221ENST00000559831 FOXD4L3Q6VB84 417 aaPredicted RBP11.99□□□□□ -0.49
TPM1-221ENST00000559831 DIS3L2Q8IYB7 885 aaKnown RBP11.99□□□□□ -0.49
TPM1-221ENST00000559831 FAM43AQ8N2R8 423 aa11.99□□□□□ -0.49
TPM1-221ENST00000559831 REPS2Q8NFH8 660 aa11.99□□□□□ -0.49
TPM1-221ENST00000559831 OXER1Q8TDS5 423 aa11.99□□□□□ -0.49
TPM1-221ENST00000559831 C6orf50Q9HD87 102 aa11.99□□□□□ -0.49
TPM1-221ENST00000559831 HOMER2Q9NSB8 354 aa11.99□□□□□ -0.49
TPM1-221ENST00000559831 ADAMTS5Q9UNA0 930 aa11.99□□□□□ -0.49
TPM1-221ENST00000559831 ZNF536O15090 1300 aa11.99□□□□□ -0.49
TPM1-221ENST00000559831 ABCB11O95342 1321 aa11.99□□□□□ -0.49
TPM1-221ENST00000559831 TESPA1A2RU30 521 aaPredicted RBP11.98□□□□□ -0.49
TPM1-221ENST00000559831 RASSF10A6NK89 507 aa11.98□□□□□ -0.49
TPM1-221ENST00000559831 BTBD18B2RXH4 712 aa11.98□□□□□ -0.49
TPM1-221ENST00000559831 KIF28PB7ZC32 967 aa11.98□□□□□ -0.49
TPM1-221ENST00000559831 PEX10O60683 326 aa11.98□□□□□ -0.49
TPM1-221ENST00000559831 GNA11P29992 359 aa11.98□□□□□ -0.49
TPM1-221ENST00000559831 KIF23Q02241 960 aaPredicted RBP11.98□□□□□ -0.49
TPM1-221ENST00000559831 SREBF2Q12772 1141 aa11.98□□□□□ -0.49
TPM1-221ENST00000559831 RESTQ13127 1097 aa11.98□□□□□ -0.49
TPM1-221ENST00000559831 TMEM132BQ14DG7 1078 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms