RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 HOMER2Q9NSB8 354 aa14.49□□□□□ -0.09
SPG11-219ENST00000559822 RNF146Q9NTX7 359 aa14.49□□□□□ -0.09
SPG11-219ENST00000559822 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.49□□□□□ -0.09
SPG11-219ENST00000559822 SZT2Q5T011 3432 aa14.48□□□□□ -0.09
SPG11-219ENST00000559822 CCDC171Q6TFL3 1326 aa14.48□□□□□ -0.09
SPG11-219ENST00000559822 POTEB2H3BUK9 544 aa14.48□□□□□ -0.09
SPG11-219ENST00000559822 ADAMTS4O75173 837 aa14.48□□□□□ -0.09
SPG11-219ENST00000559822 DUSP11O75319 330 aaKnown RBP14.48□□□□□ -0.09
SPG11-219ENST00000559822 SNAI1O95863 264 aaPredicted RBP14.48□□□□□ -0.09
SPG11-219ENST00000559822 FGAP02671 866 aa14.48□□□□□ -0.09
SPG11-219ENST00000559822 HSPD1P10809 573 aaKnown RBP14.48□□□□□ -0.09
SPG11-219ENST00000559822 NMIQ13287 307 aaPredicted RBP14.48□□□□□ -0.09
SPG11-219ENST00000559822 ACVR2BQ13705 512 aa14.48□□□□□ -0.09
SPG11-219ENST00000559822 CCDC96Q2M329 555 aa14.48□□□□□ -0.09
SPG11-219ENST00000559822 RRP12Q5JTH9 1297 aaKnown RBP14.48□□□□□ -0.09
SPG11-219ENST00000559822 KCTD1Q719H9 257 aa14.48□□□□□ -0.09
SPG11-219ENST00000559822 CHD1LQ86WJ1 897 aa14.48□□□□□ -0.09
SPG11-219ENST00000559822 RILPL2Q969X0 211 aa14.48□□□□□ -0.09
SPG11-219ENST00000559822 TACC3Q9Y6A5 838 aa14.48□□□□□ -0.09
SPG11-219ENST00000559822 LTBP2Q14767 1821 aa14.48□□□□□ -0.09
SPG11-219ENST00000559822 SYNRGQ9UMZ2 1314 aa14.47□□□□□ -0.09
SPG11-219ENST00000559822 A0A1W2PQ45 241 aaPredicted RBP14.47□□□□□ -0.09
SPG11-219ENST00000559822 A0A1W2PQY0 241 aa14.47□□□□□ -0.09
SPG11-219ENST00000559822 ASB14A6NK59 587 aa14.47□□□□□ -0.09
SPG11-219ENST00000559822 NMT2O60551 498 aa14.47□□□□□ -0.09
SPG11-219ENST00000559822 TOP1P11387 765 aaKnown RBP14.47□□□□□ -0.09
SPG11-219ENST00000559822 NOVP48745 357 aa14.47□□□□□ -0.09
SPG11-219ENST00000559822 NT5C2P49902 561 aa14.47□□□□□ -0.09
SPG11-219ENST00000559822 TLE2Q04725 743 aa14.47□□□□□ -0.09
SPG11-219ENST00000559822 B4GALNT3Q6L9W6 998 aa14.47□□□□□ -0.09
SPG11-219ENST00000559822 ARMCX2Q7L311 632 aa14.47□□□□□ -0.09
SPG11-219ENST00000559822 PCSK9Q8NBP7 692 aaKnown RBP14.47□□□□□ -0.09
SPG11-219ENST00000559822 TRERF1Q96PN7 1200 aa14.47□□□□□ -0.09
SPG11-219ENST00000559822 OSBPL3Q9H4L5 887 aa14.47□□□□□ -0.09
SPG11-219ENST00000559822 RNF41Q9H4P4 317 aaPredicted RBP14.47□□□□□ -0.09
SPG11-219ENST00000559822 INCENPQ9NQS7 918 aa14.47□□□□□ -0.09
SPG11-219ENST00000559822 STARD7Q9NQZ5 370 aa14.47□□□□□ -0.09
SPG11-219ENST00000559822 PDLIM7Q9NR12 457 aa14.47□□□□□ -0.09
SPG11-219ENST00000559822 TCP11L1Q9NUJ3 509 aa14.47□□□□□ -0.09
SPG11-219ENST00000559822 PRR12Q9ULL5 1215 aa14.47□□□□□ -0.09
SPG11-219ENST00000559822 ZNF536O15090 1300 aa14.46□□□□□ -0.09
SPG11-219ENST00000559822 LAMA3Q16787 3333 aa14.46□□□□□ -0.09
SPG11-219ENST00000559822 HIP1O00291 1037 aa14.46□□□□□ -0.09
SPG11-219ENST00000559822 CLTBP09497 229 aa14.46□□□□□ -0.09
SPG11-219ENST00000559822 ALAS1P13196 640 aa14.46□□□□□ -0.09
SPG11-219ENST00000559822 CST5P28325 142 aaPredicted RBP14.46□□□□□ -0.09
SPG11-219ENST00000559822 ACLYP53396 1101 aa14.46□□□□□ -0.09
SPG11-219ENST00000559822 CCDC144BQ3MJ40 725 aa14.46□□□□□ -0.09
SPG11-219ENST00000559822 MFSD6Q6ZSS7 791 aa14.46□□□□□ -0.09
SPG11-219ENST00000559822 ZNF589Q86UQ0 364 aaPredicted RBP14.46□□□□□ -0.09
SPG11-219ENST00000559822 CCDC144CPQ8IYA2 1237 aa14.46□□□□□ -0.09
SPG11-219ENST00000559822 DEFB123Q8N688 67 aa14.46□□□□□ -0.09
SPG11-219ENST00000559822 FAM133AQ8N9E0 248 aa14.46□□□□□ -0.09
SPG11-219ENST00000559822 KLHDC9Q8NEP7 349 aa14.46□□□□□ -0.09
SPG11-219ENST00000559822 LENG1Q96BZ8 264 aaPredicted RBP14.46□□□□□ -0.09
SPG11-219ENST00000559822 AGBL1Q96MI9 1066 aa14.46□□□□□ -0.09
SPG11-219ENST00000559822 GLT1D1Q96MS3 346 aa14.46□□□□□ -0.09
SPG11-219ENST00000559822 A1CFQ9NQ94 594 aaKnown RBP14.46□□□□□ -0.09
SPG11-219ENST00000559822 PNMA2Q9UL42 364 aa14.46□□□□□ -0.09
SPG11-219ENST00000559822 CCPG1Q9ULG6 757 aa14.46□□□□□ -0.09
SPG11-219ENST00000559822 MTMR7Q9Y216 660 aa14.46□□□□□ -0.09
SPG11-219ENST00000559822 MROH7Q68CQ1 1323 aa14.45□□□□□ -0.1
SPG11-219ENST00000559822 DCDC2CA8MYV0 355 aa14.45□□□□□ -0.1
SPG11-219ENST00000559822 ICAM1P05362 532 aa14.45□□□□□ -0.1
SPG11-219ENST00000559822 C6orf222P0C671 652 aaPredicted RBP14.45□□□□□ -0.1
SPG11-219ENST00000559822 SDSP20132 328 aa14.45□□□□□ -0.1
SPG11-219ENST00000559822 NUCB1Q02818 461 aa14.45□□□□□ -0.1
SPG11-219ENST00000559822 AKNAD1Q5T1N1 836 aa14.45□□□□□ -0.1
SPG11-219ENST00000559822 CCDC174Q6PII3 467 aa14.45□□□□□ -0.1
SPG11-219ENST00000559822 BTNL9Q6UXG8 535 aa14.45□□□□□ -0.1
SPG11-219ENST00000559822 BADQ92934 168 aa14.45□□□□□ -0.1
SPG11-219ENST00000559822 CHMP4CQ96CF2 233 aa14.45□□□□□ -0.1
SPG11-219ENST00000559822 FGD4Q96M96 766 aa14.45□□□□□ -0.1
SPG11-219ENST00000559822 TTC14Q96N46 770 aa14.45□□□□□ -0.1
SPG11-219ENST00000559822 TOX2Q96NM4 488 aa14.45□□□□□ -0.1
SPG11-219ENST00000559822 DIAPH3Q9NSV4 1193 aa14.45□□□□□ -0.1
SPG11-219ENST00000559822 ELP1O95163 1332 aa14.44□□□□□ -0.1
SPG11-219ENST00000559822 PQBP1O60828 265 aaKnown RBP14.44□□□□□ -0.1
SPG11-219ENST00000559822 RAG1P15918 1043 aa14.44□□□□□ -0.1
SPG11-219ENST00000559822 GJA9P57773 515 aa14.44□□□□□ -0.1
SPG11-219ENST00000559822 HAND2P61296 217 aa14.44□□□□□ -0.1
SPG11-219ENST00000559822 CNTN2Q02246 1040 aa14.44□□□□□ -0.1
SPG11-219ENST00000559822 KCNA10Q16322 511 aa14.44□□□□□ -0.1
SPG11-219ENST00000559822 SYDE2Q5VT97 1194 aa14.44□□□□□ -0.1
SPG11-219ENST00000559822 ANKRD33Q7Z3H0 272 aa14.44□□□□□ -0.1
SPG11-219ENST00000559822 PLEKHM2Q8IWE5 1019 aa14.44□□□□□ -0.1
SPG11-219ENST00000559822 ESR2Q92731 530 aa14.44□□□□□ -0.1
SPG11-219ENST00000559822 TMEM47Q9BQJ4 181 aa14.44□□□□□ -0.1
SPG11-219ENST00000559822 UPF3AQ9H1J1 476 aaKnown RBP14.44□□□□□ -0.1
SPG11-219ENST00000559822 RANBP17Q9H2T7 1088 aaKnown RBP14.44□□□□□ -0.1
SPG11-219ENST00000559822 MCM3APO60318 1980 aa14.43□□□□□ -0.1
SPG11-219ENST00000559822 ZNF213O14771 459 aa14.43□□□□□ -0.1
SPG11-219ENST00000559822 KIAA0355O15063 1070 aa14.43□□□□□ -0.1
SPG11-219ENST00000559822 CCDC178Q5BJE1 867 aa14.43□□□□□ -0.1
SPG11-219ENST00000559822 FAM109BQ6ICB4 259 aaPredicted RBP14.43□□□□□ -0.1
SPG11-219ENST00000559822 CCSAPQ6IQ19 270 aaPredicted RBP14.43□□□□□ -0.1
SPG11-219ENST00000559822 NOL8Q76FK4 1167 aaKnown RBP14.43□□□□□ -0.1
SPG11-219ENST00000559822 TMEM39AQ9NV64 488 aa14.43□□□□□ -0.1
SPG11-219ENST00000559822 ADD3Q9UEY8 706 aaKnown RBP14.43□□□□□ -0.1
SPG11-219ENST00000559822 LOC102724159A0A0B4J2E5 919 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms