RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 MTMR2Q13614 643 aa7.11□□□□□ -1.27
USP3-215ENST00000559771 GORABQ5T7V8 394 aa7.11□□□□□ -1.27
USP3-215ENST00000559771 MAP3K21Q5TCX8 1036 aa7.11□□□□□ -1.27
USP3-215ENST00000559771 NAA16Q6N069 864 aaPredicted RBP7.11□□□□□ -1.27
USP3-215ENST00000559771 MAPKAPK5Q8IW41 473 aa7.11□□□□□ -1.27
USP3-215ENST00000559771 TRIB2Q92519 343 aa7.11□□□□□ -1.27
USP3-215ENST00000559771 USP6NLQ92738 828 aa7.11□□□□□ -1.27
USP3-215ENST00000559771 PAWRQ96IZ0 340 aaKnown RBP7.11□□□□□ -1.27
USP3-215ENST00000559771 P2RX7Q99572 595 aaKnown RBP7.11□□□□□ -1.27
USP3-215ENST00000559771 TBC1D2Q9BYX2 928 aa7.11□□□□□ -1.27
USP3-215ENST00000559771 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.11□□□□□ -1.27
USP3-215ENST00000559771 DHX36Q9H2U1 1008 aaKnown RBP7.11□□□□□ -1.27
USP3-215ENST00000559771 ANTXR1Q9H6X2 564 aa7.11□□□□□ -1.27
USP3-215ENST00000559771 RBPJLQ9UBG7 517 aa7.11□□□□□ -1.27
USP3-215ENST00000559771 PALD1Q9ULE6 856 aa7.11□□□□□ -1.27
USP3-215ENST00000559771 FRMPD3Q5JV73 1810 aa7.11□□□□□ -1.27
USP3-215ENST00000559771 RLFQ13129 1914 aa7.1□□□□□ -1.27
USP3-215ENST00000559771 OIP5O43482 229 aa7.1□□□□□ -1.27
USP3-215ENST00000559771 SURF6O75683 361 aaKnown RBP7.1□□□□□ -1.27
USP3-215ENST00000559771 CNMDO75829 334 aa7.1□□□□□ -1.27
USP3-215ENST00000559771 TFRCP02786 760 aaKnown RBP7.1□□□□□ -1.27
USP3-215ENST00000559771 HOXB4P17483 251 aaPredicted RBP7.1□□□□□ -1.27
USP3-215ENST00000559771 CHRNA4P43681 627 aa7.1□□□□□ -1.27
USP3-215ENST00000559771 DOC2BQ14184 412 aa7.1□□□□□ -1.27
USP3-215ENST00000559771 TTC39AQ5SRH9 613 aa7.1□□□□□ -1.27
USP3-215ENST00000559771 ZKSCAN2Q63HK3 967 aa7.1□□□□□ -1.27
USP3-215ENST00000559771 TATDN1Q6P1N9 297 aa7.1□□□□□ -1.27
USP3-215ENST00000559771 FOXP4Q8IVH2 680 aaPredicted RBP7.1□□□□□ -1.27
USP3-215ENST00000559771 COA7Q96BR5 231 aa7.1□□□□□ -1.27
USP3-215ENST00000559771 HTATIP2Q9BUP3 242 aa7.1□□□□□ -1.27
USP3-215ENST00000559771 CCDC8Q9H0W5 538 aaPredicted RBP7.1□□□□□ -1.27
USP3-215ENST00000559771 SUV39H2Q9H5I1 410 aa7.1□□□□□ -1.27
USP3-215ENST00000559771 ZFP64Q9NPA5 681 aa7.1□□□□□ -1.27
USP3-215ENST00000559771 SAP30BPQ9UHR5 308 aaKnown RBP7.1□□□□□ -1.27
USP3-215ENST00000559771 ZBTB21Q9ULJ3 1066 aa7.1□□□□□ -1.27
USP3-215ENST00000559771 PFASO15067 1338 aa7.09□□□□□ -1.27
USP3-215ENST00000559771 RPTORQ8N122 1335 aa7.09□□□□□ -1.27
USP3-215ENST00000559771 C19orf81C9J6K1 198 aa7.09□□□□□ -1.27
USP3-215ENST00000559771 BAG3O95817 575 aa7.09□□□□□ -1.27
USP3-215ENST00000559771 IGHA2P01877 340 aa7.09□□□□□ -1.27
USP3-215ENST00000559771 HMGCRP04035 888 aa7.09□□□□□ -1.27
USP3-215ENST00000559771 ASNSP08243 561 aa7.09□□□□□ -1.27
USP3-215ENST00000559771 GUCY1A2P33402 732 aa7.09□□□□□ -1.27
USP3-215ENST00000559771 HERVK_113P62684 666 aa7.09□□□□□ -1.27
USP3-215ENST00000559771 CCDC158Q5M9N0 1113 aa7.09□□□□□ -1.27
USP3-215ENST00000559771 CEP85Q6P2H3 762 aa7.09□□□□□ -1.27
USP3-215ENST00000559771 MIGA1Q8NAN2 632 aa7.09□□□□□ -1.27
USP3-215ENST00000559771 KCNV2Q8TDN2 545 aa7.09□□□□□ -1.27
USP3-215ENST00000559771 RIOK1Q9BRS2 568 aaKnown RBP7.09□□□□□ -1.27
USP3-215ENST00000559771 PORCNQ9H237 461 aa7.09□□□□□ -1.27
USP3-215ENST00000559771 AS3MTQ9HBK9 375 aa7.09□□□□□ -1.27
USP3-215ENST00000559771 STAP2Q9UGK3 403 aa7.09□□□□□ -1.27
USP3-215ENST00000559771 OGDHLQ9ULD0 1010 aa7.09□□□□□ -1.27
USP3-215ENST00000559771 NAV1Q8NEY1 1877 aa7.09□□□□□ -1.28
USP3-215ENST00000559771 A0A0G2JMZ2 1700 aa7.08□□□□□ -1.28
USP3-215ENST00000559771 SCO2A0A1W2PP80 73 aa7.08□□□□□ -1.28
USP3-215ENST00000559771 SHISA8B8ZZ34 492 aa7.08□□□□□ -1.28
USP3-215ENST00000559771 USP17L10C9JJH3 530 aa7.08□□□□□ -1.28
USP3-215ENST00000559771 IGSF3O75054 1194 aa7.08□□□□□ -1.28
USP3-215ENST00000559771 GH2P01242 217 aa7.08□□□□□ -1.28
USP3-215ENST00000559771 COL6A1P12109 1028 aa7.08□□□□□ -1.28
USP3-215ENST00000559771 XRCC5P13010 732 aaKnown RBP7.08□□□□□ -1.28
USP3-215ENST00000559771 CAPN2P17655 700 aa7.08□□□□□ -1.28
USP3-215ENST00000559771 CYP2B6P20813 491 aa7.08□□□□□ -1.28
USP3-215ENST00000559771 CYP7A1P22680 504 aa7.08□□□□□ -1.28
USP3-215ENST00000559771 SHMT1P34896 483 aa7.08□□□□□ -1.28
USP3-215ENST00000559771 CACNB2Q08289 660 aaPredicted RBP7.08□□□□□ -1.28
USP3-215ENST00000559771 PABPC4Q13310 644 aaKnown RBP eCLIP7.08□□□□□ -1.28
USP3-215ENST00000559771 CCL14Q16627 93 aa7.08□□□□□ -1.28
USP3-215ENST00000559771 GPRC5AQ8NFJ5 357 aa7.08□□□□□ -1.28
USP3-215ENST00000559771 RNF217Q8TC41 542 aa7.08□□□□□ -1.28
USP3-215ENST00000559771 ACER1Q8TDN7 264 aa7.08□□□□□ -1.28
USP3-215ENST00000559771 C12orf42Q96LP6 360 aa7.08□□□□□ -1.28
USP3-215ENST00000559771 GDF15Q99988 308 aa7.08□□□□□ -1.28
USP3-215ENST00000559771 GINM1Q9NU53 330 aa7.08□□□□□ -1.28
USP3-215ENST00000559771 NR2E3Q9Y5X4 410 aa7.08□□□□□ -1.28
USP3-215ENST00000559771 LAMA2P24043 3122 aaKnown RBP7.08□□□□□ -1.28
USP3-215ENST00000559771 PARP14Q460N5 1801 aa7.08□□□□□ -1.28
USP3-215ENST00000559771 IDH1O75874 414 aaKnown RBP7.07□□□□□ -1.28
USP3-215ENST00000559771 FSHRP23945 695 aa7.07□□□□□ -1.28
USP3-215ENST00000559771 CCND3P30281 292 aaPredicted RBP7.07□□□□□ -1.28
USP3-215ENST00000559771 BMP8BP34820 402 aa7.07□□□□□ -1.28
USP3-215ENST00000559771 PLCD1P51178 756 aa7.07□□□□□ -1.28
USP3-215ENST00000559771 ERVK-9P63128 1117 aa7.07□□□□□ -1.28
USP3-215ENST00000559771 ERVK-24P63145 666 aa7.07□□□□□ -1.28
USP3-215ENST00000559771 IRX3P78415 501 aaPredicted RBP7.07□□□□□ -1.28
USP3-215ENST00000559771 GABPAQ06546 454 aa7.07□□□□□ -1.28
USP3-215ENST00000559771 OS9Q13438 667 aaPredicted RBP7.07□□□□□ -1.28
USP3-215ENST00000559771 TPRNQ4KMQ1 711 aa7.07□□□□□ -1.28
USP3-215ENST00000559771 LINC00114Q6XXX2 140 aa7.07□□□□□ -1.28
USP3-215ENST00000559771 C1orf229Q6ZS94 237 aaPredicted RBP7.07□□□□□ -1.28
USP3-215ENST00000559771 GPR142Q7Z601 462 aa7.07□□□□□ -1.28
USP3-215ENST00000559771 NECAB2Q7Z6G3 386 aa7.07□□□□□ -1.28
USP3-215ENST00000559771 SIRT2Q8IXJ6 389 aa7.07□□□□□ -1.28
USP3-215ENST00000559771 CRACR2BQ8N4Y2 399 aaPredicted RBP7.07□□□□□ -1.28
USP3-215ENST00000559771 MAGEB6Q8N7X4 407 aa7.07□□□□□ -1.28
USP3-215ENST00000559771 PANK1Q8TE04 598 aa7.07□□□□□ -1.28
USP3-215ENST00000559771 ZNF837Q96EG3 531 aaPredicted RBP7.07□□□□□ -1.28
USP3-215ENST00000559771 NOL10Q9BSC4 688 aaKnown RBP7.07□□□□□ -1.28
USP3-215ENST00000559771 EHD4Q9H223 541 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms