RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 LLPHQ9BRT6 129 aaKnown RBP17.2■□□□□ 0.34
SNRPA1-207ENST00000559309 RNF26Q9BY78 433 aaPredicted RBP17.2■□□□□ 0.34
SNRPA1-207ENST00000559309 TXNRD2Q9NNW7 524 aa17.2■□□□□ 0.34
SNRPA1-207ENST00000559309 BTBD7Q9P203 1132 aa17.2■□□□□ 0.34
SNRPA1-207ENST00000559309 RABGAP1Q9Y3P9 1069 aa17.2■□□□□ 0.34
SNRPA1-207ENST00000559309 MYH6P13533 1939 aa17.19■□□□□ 0.34
SNRPA1-207ENST00000559309 ZBTB5O15062 677 aa17.19■□□□□ 0.34
SNRPA1-207ENST00000559309 PRPF3O43395 683 aaKnown RBP17.19■□□□□ 0.34
SNRPA1-207ENST00000559309 RAD21O60216 631 aa17.19■□□□□ 0.34
SNRPA1-207ENST00000559309 PPP1R11O60927 126 aaPredicted RBP17.19■□□□□ 0.34
SNRPA1-207ENST00000559309 FMNL1O95466 1100 aaPredicted RBP17.19■□□□□ 0.34
SNRPA1-207ENST00000559309 FDPSP14324 419 aaKnown RBP17.19■□□□□ 0.34
SNRPA1-207ENST00000559309 STK3Q13188 491 aa17.19■□□□□ 0.34
SNRPA1-207ENST00000559309 CRHR2Q13324 411 aa17.19■□□□□ 0.34
SNRPA1-207ENST00000559309 TMEM132BQ14DG7 1078 aa17.19■□□□□ 0.34
SNRPA1-207ENST00000559309 NOL8Q76FK4 1167 aaKnown RBP17.19■□□□□ 0.34
SNRPA1-207ENST00000559309 R3HDMLQ9H3Y0 253 aa17.19■□□□□ 0.34
SNRPA1-207ENST00000559309 RNF186Q9NXI6 227 aa17.19■□□□□ 0.34
SNRPA1-207ENST00000559309 PNMA6FA0A0J9YX94 578 aa17.18■□□□□ 0.34
SNRPA1-207ENST00000559309 DHX16O60231 1041 aaKnown RBP17.18■□□□□ 0.34
SNRPA1-207ENST00000559309 ICAM1P05362 532 aa17.18■□□□□ 0.34
SNRPA1-207ENST00000559309 TAF1CQ15572 869 aaPredicted RBP17.18■□□□□ 0.34
SNRPA1-207ENST00000559309 FAM110CQ1W6H9 321 aa17.18■□□□□ 0.34
SNRPA1-207ENST00000559309 QRICH1Q2TAL8 776 aa17.18■□□□□ 0.34
SNRPA1-207ENST00000559309 KIFC2Q96AC6 838 aa17.18■□□□□ 0.34
SNRPA1-207ENST00000559309 CHMP4CQ96CF2 233 aa17.18■□□□□ 0.34
SNRPA1-207ENST00000559309 PIGSQ96S52 555 aa17.18■□□□□ 0.34
SNRPA1-207ENST00000559309 GHRHRQ02643 423 aa17.17■□□□□ 0.34
SNRPA1-207ENST00000559309 CDC37Q16543 378 aaPredicted RBP17.17■□□□□ 0.34
SNRPA1-207ENST00000559309 Q3C1V9 767 aa17.17■□□□□ 0.34
SNRPA1-207ENST00000559309 SHISA4Q96DD7 197 aa17.17■□□□□ 0.34
SNRPA1-207ENST00000559309 INTS4Q96HW7 963 aaKnown RBP17.17■□□□□ 0.34
SNRPA1-207ENST00000559309 ZFYVE28Q9HCC9 887 aa17.17■□□□□ 0.34
SNRPA1-207ENST00000559309 RBM27Q9P2N5 1060 aaKnown RBP17.17■□□□□ 0.34
SNRPA1-207ENST00000559309 TSKSQ9UJT2 592 aa17.17■□□□□ 0.34
SNRPA1-207ENST00000559309 ZNF236Q9UL36 1845 aa17.17■□□□□ 0.34
SNRPA1-207ENST00000559309 ZBED4O75132 1171 aa17.16■□□□□ 0.34
SNRPA1-207ENST00000559309 ERVK-9P63128 1117 aa17.16■□□□□ 0.34
SNRPA1-207ENST00000559309 ERVK-24P63145 666 aa17.16■□□□□ 0.34
SNRPA1-207ENST00000559309 PFKFB3Q16875 520 aaPredicted RBP17.16■□□□□ 0.34
SNRPA1-207ENST00000559309 RIOX2Q8IUF8 465 aa17.16■□□□□ 0.34
SNRPA1-207ENST00000559309 CCDC83Q8IWF9 413 aa17.16■□□□□ 0.34
SNRPA1-207ENST00000559309 SHCBP1Q8NEM2 672 aa17.16■□□□□ 0.34
SNRPA1-207ENST00000559309 PHKBQ93100 1093 aa17.16■□□□□ 0.34
SNRPA1-207ENST00000559309 MAF1Q9H063 256 aa17.16■□□□□ 0.34
SNRPA1-207ENST00000559309 PNMA2Q9UL42 364 aa17.16■□□□□ 0.34
SNRPA1-207ENST00000559309 RBBP6Q7Z6E9 1792 aaKnown RBP17.15■□□□□ 0.34
SNRPA1-207ENST00000559309 CCDC85CA6NKD9 419 aa17.15■□□□□ 0.34
SNRPA1-207ENST00000559309 hCG_1984214I3L0E3 225 aa17.15■□□□□ 0.34
SNRPA1-207ENST00000559309 OPLAHO14841 1288 aa17.15■□□□□ 0.34
SNRPA1-207ENST00000559309 PEX10O60683 326 aa17.15■□□□□ 0.34
SNRPA1-207ENST00000559309 CDKL5O76039 1030 aa17.15■□□□□ 0.34
SNRPA1-207ENST00000559309 FAM177A1Q8N128 213 aaPredicted RBP17.15■□□□□ 0.34
SNRPA1-207ENST00000559309 ZNF713Q8N859 430 aaPredicted RBP17.15■□□□□ 0.34
SNRPA1-207ENST00000559309 TEX13BQ9BXU2 312 aa17.15■□□□□ 0.34
SNRPA1-207ENST00000559309 SPATC1LQ9H0A9 340 aa17.15■□□□□ 0.34
SNRPA1-207ENST00000559309 NAP1L2Q9ULW6 460 aaPredicted RBP17.15■□□□□ 0.34
SNRPA1-207ENST00000559309 V9GY48 417 aaPredicted RBP17.15■□□□□ 0.34
SNRPA1-207ENST00000559309 MGAMO43451 1857 aa17.14■□□□□ 0.33
SNRPA1-207ENST00000559309 PTPDC1A2A3K4 754 aa17.14■□□□□ 0.33
SNRPA1-207ENST00000559309 JAK2O60674 1132 aa17.14■□□□□ 0.33
SNRPA1-207ENST00000559309 DEXIO95424 95 aa17.14■□□□□ 0.33
SNRPA1-207ENST00000559309 SNAP25P60880 206 aa17.14■□□□□ 0.33
SNRPA1-207ENST00000559309 TYW1BQ6NUM6 668 aa17.14■□□□□ 0.33
SNRPA1-207ENST00000559309 CPLX2Q6PUV4 134 aaKnown RBP17.14■□□□□ 0.33
SNRPA1-207ENST00000559309 RGS22Q8NE09 1264 aa17.14■□□□□ 0.33
SNRPA1-207ENST00000559309 SMCR8Q8TEV9 937 aaPredicted RBP17.14■□□□□ 0.33
SNRPA1-207ENST00000559309 RRP36Q96EU6 259 aaKnown RBP17.14■□□□□ 0.33
SNRPA1-207ENST00000559309 AGBL1Q96MI9 1066 aa17.14■□□□□ 0.33
SNRPA1-207ENST00000559309 AMNQ9BXJ7 453 aa17.14■□□□□ 0.33
SNRPA1-207ENST00000559309 MOV10L1Q9BXT6 1211 aaKnown RBP17.14■□□□□ 0.33
SNRPA1-207ENST00000559309 MCOLN1Q9GZU1 580 aa17.14■□□□□ 0.33
SNRPA1-207ENST00000559309 RIPK3Q9Y572 518 aa17.14■□□□□ 0.33
SNRPA1-207ENST00000559309 PLXNB2O15031 1838 aa17.14■□□□□ 0.33
SNRPA1-207ENST00000559309 LCTP09848 1927 aa17.13■□□□□ 0.33
SNRPA1-207ENST00000559309 CPLX1O14810 134 aa17.13■□□□□ 0.33
SNRPA1-207ENST00000559309 SLC34A2O95436 690 aa17.13■□□□□ 0.33
SNRPA1-207ENST00000559309 SCG2P13521 617 aa17.13■□□□□ 0.33
SNRPA1-207ENST00000559309 STAT3P40763 770 aa17.13■□□□□ 0.33
SNRPA1-207ENST00000559309 MLLT1Q03111 559 aaPredicted RBP17.13■□□□□ 0.33
SNRPA1-207ENST00000559309 IKQ13123 557 aaPredicted RBP17.13■□□□□ 0.33
SNRPA1-207ENST00000559309 TKFCQ3LXA3 575 aa17.13■□□□□ 0.33
SNRPA1-207ENST00000559309 WWC2Q6AWC2 1192 aa17.13■□□□□ 0.33
SNRPA1-207ENST00000559309 TEX2Q8IWB9 1127 aa17.13■□□□□ 0.33
SNRPA1-207ENST00000559309 CCDC82Q8N4S0 544 aa17.13■□□□□ 0.33
SNRPA1-207ENST00000559309 GPRC5AQ8NFJ5 357 aa17.13■□□□□ 0.33
SNRPA1-207ENST00000559309 CLEC4DQ8WXI8 215 aa17.13■□□□□ 0.33
SNRPA1-207ENST00000559309 RAVER2Q9HCJ3 691 aaKnown RBP17.13■□□□□ 0.33
SNRPA1-207ENST00000559309 VAT1LQ9HCJ6 419 aa17.13■□□□□ 0.33
SNRPA1-207ENST00000559309 BARHL2Q9NY43 387 aa17.13■□□□□ 0.33
SNRPA1-207ENST00000559309 RBM19Q9Y4C8 960 aaKnown RBP17.13■□□□□ 0.33
SNRPA1-207ENST00000559309 hCG_1642624A0A1W2PR95 340 aa17.12■□□□□ 0.33
SNRPA1-207ENST00000559309 TRPA1O75762 1119 aa17.12■□□□□ 0.33
SNRPA1-207ENST00000559309 SLC25A27O95847 323 aa17.12■□□□□ 0.33
SNRPA1-207ENST00000559309 COPB2P35606 906 aa17.12■□□□□ 0.33
SNRPA1-207ENST00000559309 HMGN5P82970 282 aaKnown RBP17.12■□□□□ 0.33
SNRPA1-207ENST00000559309 SSRP1Q08945 709 aaKnown RBP17.12■□□□□ 0.33
SNRPA1-207ENST00000559309 PPP1R18Q6NYC8 613 aa17.12■□□□□ 0.33
SNRPA1-207ENST00000559309 FBXO11Q86XK2 927 aa17.12■□□□□ 0.33
SNRPA1-207ENST00000559309 HSCBQ8IWL3 235 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms