RNA–Protein interactions for RNA: ENST00000558890.5

LRRC28-211, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 978 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-211ENST00000558890 TMEM67Q5HYA8 995 aa8.85□□□□□ -0.99
LRRC28-211ENST00000558890 RRP12Q5JTH9 1297 aaKnown RBP8.85□□□□□ -0.99
LRRC28-211ENST00000558890 ATL3Q6DD88 541 aa8.85□□□□□ -0.99
LRRC28-211ENST00000558890 OTUD7BQ6GQQ9 843 aa8.85□□□□□ -0.99
LRRC28-211ENST00000558890 STK11IPQ8N1F8 1099 aa8.85□□□□□ -0.99
LRRC28-211ENST00000558890 NSUN7Q8NE18 718 aaKnown RBP8.85□□□□□ -0.99
LRRC28-211ENST00000558890 BICD2Q8TD16 824 aa8.85□□□□□ -0.99
LRRC28-211ENST00000558890 DCAF4Q8WV16 495 aa8.85□□□□□ -0.99
LRRC28-211ENST00000558890 DDX11Q96FC9 970 aa8.85□□□□□ -0.99
LRRC28-211ENST00000558890 P2RX7Q99572 595 aaKnown RBP8.85□□□□□ -0.99
LRRC28-211ENST00000558890 BEGAINQ9BUH8 593 aa8.85□□□□□ -0.99
LRRC28-211ENST00000558890 LRRC2Q9BYS8 371 aa8.85□□□□□ -0.99
LRRC28-211ENST00000558890 MAF1Q9H063 256 aa8.85□□□□□ -0.99
LRRC28-211ENST00000558890 KAT14Q9H8E8 782 aa8.85□□□□□ -0.99
LRRC28-211ENST00000558890 RBM28Q9NW13 759 aaKnown RBP8.85□□□□□ -0.99
LRRC28-211ENST00000558890 PNMA2Q9UL42 364 aa8.85□□□□□ -0.99
LRRC28-211ENST00000558890 CCDC69A6NI79 296 aa8.84□□□□□ -0.99
LRRC28-211ENST00000558890 GOLGA8BA8MQT2 603 aa8.84□□□□□ -0.99
LRRC28-211ENST00000558890 WDR46O15213 610 aaKnown RBP8.84□□□□□ -0.99
LRRC28-211ENST00000558890 CNMDO75829 334 aa8.84□□□□□ -0.99
LRRC28-211ENST00000558890 KIF5BP33176 963 aa8.84□□□□□ -0.99
LRRC28-211ENST00000558890 TROAPQ12815 778 aa8.84□□□□□ -0.99
LRRC28-211ENST00000558890 TAF1CQ15572 869 aaPredicted RBP8.84□□□□□ -0.99
LRRC28-211ENST00000558890 FAM47AQ5JRC9 791 aa8.84□□□□□ -0.99
LRRC28-211ENST00000558890 APOA5Q6Q788 366 aa8.84□□□□□ -0.99
LRRC28-211ENST00000558890 USP17L2Q6R6M4 530 aa8.84□□□□□ -0.99
LRRC28-211ENST00000558890 SYNE3Q6ZMZ3 975 aa8.84□□□□□ -0.99
LRRC28-211ENST00000558890 CATSPERGQ6ZRH7 1159 aa8.84□□□□□ -0.99
LRRC28-211ENST00000558890 CATIPQ7Z7H3 387 aa8.84□□□□□ -0.99
LRRC28-211ENST00000558890 PNMA1Q8ND90 353 aa8.84□□□□□ -0.99
LRRC28-211ENST00000558890 GTF3C2Q8WUA4 911 aaPredicted RBP8.84□□□□□ -0.99
LRRC28-211ENST00000558890 LEO1Q8WVC0 666 aaPredicted RBP8.84□□□□□ -0.99
LRRC28-211ENST00000558890 TMEM47Q9BQJ4 181 aa8.84□□□□□ -0.99
LRRC28-211ENST00000558890 LZTS2Q9BRK4 669 aa8.84□□□□□ -0.99
LRRC28-211ENST00000558890 ASCC2Q9H1I8 757 aaPredicted RBP8.84□□□□□ -0.99
LRRC28-211ENST00000558890 VCPKMTQ9H867 229 aa8.84□□□□□ -0.99
LRRC28-211ENST00000558890 ZFYVE28Q9HCC9 887 aa8.84□□□□□ -0.99
LRRC28-211ENST00000558890 RBPJLQ9UBG7 517 aa8.84□□□□□ -0.99
LRRC28-211ENST00000558890 ADAMTS5Q9UNA0 930 aa8.84□□□□□ -0.99
LRRC28-211ENST00000558890 STX8Q9UNK0 236 aa8.84□□□□□ -0.99
LRRC28-211ENST00000558890 DOCK3Q8IZD9 2030 aa8.83□□□□□ -1
LRRC28-211ENST00000558890 BRCA2P51587 3418 aa8.83□□□□□ -1
LRRC28-211ENST00000558890 MPHOSPH10O00566 681 aaKnown RBP8.83□□□□□ -1
LRRC28-211ENST00000558890 CPLX1O14810 134 aa8.83□□□□□ -1
LRRC28-211ENST00000558890 NMT2O60551 498 aa8.83□□□□□ -1
LRRC28-211ENST00000558890 PEX10O60683 326 aa8.83□□□□□ -1
LRRC28-211ENST00000558890 FKTNO75072 461 aa8.83□□□□□ -1
LRRC28-211ENST00000558890 VCAM1P19320 739 aa8.83□□□□□ -1
LRRC28-211ENST00000558890 PDIA3P30101 505 aaKnown RBP8.83□□□□□ -1
LRRC28-211ENST00000558890 TRAF1Q13077 416 aa8.83□□□□□ -1
LRRC28-211ENST00000558890 PABPC4Q13310 644 aaKnown RBP eCLIP8.83□□□□□ -1
LRRC28-211ENST00000558890 Q3C1V9 767 aa8.83□□□□□ -1
LRRC28-211ENST00000558890 CPLX2Q6PUV4 134 aaKnown RBP8.83□□□□□ -1
LRRC28-211ENST00000558890 BTNL9Q6UXG8 535 aa8.83□□□□□ -1
LRRC28-211ENST00000558890 LBX2Q6XYB7 198 aa8.83□□□□□ -1
LRRC28-211ENST00000558890 GADL1Q6ZQY3 521 aa8.83□□□□□ -1
LRRC28-211ENST00000558890 ZNF654Q8IZM8 581 aa8.83□□□□□ -1
LRRC28-211ENST00000558890 TNMDQ9H2S6 317 aa8.83□□□□□ -1
LRRC28-211ENST00000558890 TXNRD2Q9NNW7 524 aa8.83□□□□□ -1
LRRC28-211ENST00000558890 SLC12A7Q9Y666 1083 aa8.83□□□□□ -1
LRRC28-211ENST00000558890 RLFQ13129 1914 aa8.83□□□□□ -1
LRRC28-211ENST00000558890 KLF18A0A0U1RQI7 1052 aa8.82□□□□□ -1
LRRC28-211ENST00000558890 USP17L15C9J2P7 530 aa8.82□□□□□ -1
LRRC28-211ENST00000558890 USP17L13C9JLJ4 530 aa8.82□□□□□ -1
LRRC28-211ENST00000558890 USP17L11C9JVI0 530 aa8.82□□□□□ -1
LRRC28-211ENST00000558890 USP17L18D6R9N7 530 aa8.82□□□□□ -1
LRRC28-211ENST00000558890 USP17L22D6RA61 530 aa8.82□□□□□ -1
LRRC28-211ENST00000558890 USP17L17D6RBQ6 530 aa8.82□□□□□ -1
LRRC28-211ENST00000558890 USP17L19D6RCP7 530 aa8.82□□□□□ -1
LRRC28-211ENST00000558890 USP17L20D6RJB6 530 aa8.82□□□□□ -1
LRRC28-211ENST00000558890 F5H6K3 240 aa8.82□□□□□ -1
LRRC28-211ENST00000558890 hCG_1984214I3L0E3 225 aa8.82□□□□□ -1
LRRC28-211ENST00000558890 ZBTB43O43298 467 aa8.82□□□□□ -1
LRRC28-211ENST00000558890 DTNBO60941 627 aa8.82□□□□□ -1
LRRC28-211ENST00000558890 CDKL5O76039 1030 aa8.82□□□□□ -1
LRRC28-211ENST00000558890 PDHBP11177 359 aa8.82□□□□□ -1
LRRC28-211ENST00000558890 FOSBP53539 338 aa8.82□□□□□ -1
LRRC28-211ENST00000558890 CCT2P78371 535 aaKnown RBP8.82□□□□□ -1
LRRC28-211ENST00000558890 SP3Q02447 781 aa8.82□□□□□ -1
LRRC28-211ENST00000558890 KLRC3Q07444 240 aa8.82□□□□□ -1
LRRC28-211ENST00000558890 USP17L24Q0WX57 530 aa8.82□□□□□ -1
LRRC28-211ENST00000558890 GRM4Q14833 912 aa8.82□□□□□ -1
LRRC28-211ENST00000558890 FAM173BQ6P4H8 233 aa8.82□□□□□ -1
LRRC28-211ENST00000558890 CCDC73Q6ZRK6 1079 aa8.82□□□□□ -1
LRRC28-211ENST00000558890 FAM160B2Q86V87 743 aa8.82□□□□□ -1
LRRC28-211ENST00000558890 ZNF713Q8N859 430 aaPredicted RBP8.82□□□□□ -1
LRRC28-211ENST00000558890 CTCFLQ8NI51 663 aaPredicted RBP8.82□□□□□ -1
LRRC28-211ENST00000558890 NAP1L5Q96NT1 182 aaPredicted RBP8.82□□□□□ -1
LRRC28-211ENST00000558890 SPZ1Q9BXG8 430 aa8.82□□□□□ -1
LRRC28-211ENST00000558890 ARHGAP39Q9C0H5 1083 aa8.82□□□□□ -1
LRRC28-211ENST00000558890 CLSTN2Q9H4D0 955 aa8.82□□□□□ -1
LRRC28-211ENST00000558890 TMOD4Q9NZQ9 345 aa8.82□□□□□ -1
LRRC28-211ENST00000558890 MORF4L1Q9UBU8 362 aa8.82□□□□□ -1
LRRC28-211ENST00000558890 CLIP2Q9UDT6 1046 aa8.82□□□□□ -1
LRRC28-211ENST00000558890 CPA4Q9UI42 421 aa8.82□□□□□ -1
LRRC28-211ENST00000558890 NOL7Q9UMY1 257 aaKnown RBP8.82□□□□□ -1
LRRC28-211ENST00000558890 MYH6P13533 1939 aa8.82□□□□□ -1
LRRC28-211ENST00000558890 STK36Q9NRP7 1315 aa8.81□□□□□ -1
LRRC28-211ENST00000558890 RBBP6Q7Z6E9 1792 aaKnown RBP8.81□□□□□ -1
LRRC28-211ENST00000558890 KIAA0100Q14667 2235 aaKnown RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms