RNA–Protein interactions for RNA: ENST00000558861.1

LRRC28-209, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-209ENST00000558861 KRT28Q7Z3Y7 464 aa8.2□□□□□ -1.1
LRRC28-209ENST00000558861 FAM20CQ8IXL6 584 aa8.2□□□□□ -1.1
LRRC28-209ENST00000558861 KCT2Q8NC54 265 aa8.2□□□□□ -1.1
LRRC28-209ENST00000558861 OR6P1Q8NGX9 317 aa8.2□□□□□ -1.1
LRRC28-209ENST00000558861 PRKAG3Q9UGI9 489 aa8.2□□□□□ -1.1
LRRC28-209ENST00000558861 ALS2Q96Q42 1657 aa8.2□□□□□ -1.1
LRRC28-209ENST00000558861 BRD4O60885 1362 aaPredicted RBP8.2□□□□□ -1.1
LRRC28-209ENST00000558861 ANKRD36BQ8N2N9 1353 aa8.2□□□□□ -1.1
LRRC28-209ENST00000558861 TNS3Q68CZ2 1445 aa8.2□□□□□ -1.1
LRRC28-209ENST00000558861 ITGB2P05107 769 aa8.19□□□□□ -1.1
LRRC28-209ENST00000558861 ACRP10323 421 aa8.19□□□□□ -1.1
LRRC28-209ENST00000558861 POLR2BP30876 1174 aaKnown RBP8.19□□□□□ -1.1
LRRC28-209ENST00000558861 YARSP54577 528 aaKnown RBP8.19□□□□□ -1.1
LRRC28-209ENST00000558861 SLC6A19Q695T7 634 aa8.19□□□□□ -1.1
LRRC28-209ENST00000558861 ARMCX6Q7L4S7 300 aa8.19□□□□□ -1.1
LRRC28-209ENST00000558861 CKAP2LQ8IYA6 745 aa8.19□□□□□ -1.1
LRRC28-209ENST00000558861 XAGE3Q8WTP9 111 aa8.19□□□□□ -1.1
LRRC28-209ENST00000558861 EZH1Q92800 747 aaPredicted RBP8.19□□□□□ -1.1
LRRC28-209ENST00000558861 YIPF2Q9BWQ6 316 aa8.19□□□□□ -1.1
LRRC28-209ENST00000558861 KCNF1Q9H3M0 494 aa8.19□□□□□ -1.1
LRRC28-209ENST00000558861 CNNM2Q9H8M5 875 aa8.19□□□□□ -1.1
LRRC28-209ENST00000558861 PCOLCE2Q9UKZ9 415 aa8.19□□□□□ -1.1
LRRC28-209ENST00000558861 PHLPP1O60346 1717 aa8.19□□□□□ -1.1
LRRC28-209ENST00000558861 JCADQ9P266 1359 aa8.19□□□□□ -1.1
LRRC28-209ENST00000558861 MED1Q15648 1581 aaPredicted RBP8.18□□□□□ -1.1
LRRC28-209ENST00000558861 COL22A1Q8NFW1 1626 aaPredicted RBP8.18□□□□□ -1.1
LRRC28-209ENST00000558861 AKAP12Q02952 1782 aa8.18□□□□□ -1.1
LRRC28-209ENST00000558861 FAM86C2PA6NEL3 165 aa8.18□□□□□ -1.1
LRRC28-209ENST00000558861 NME1P15531 152 aaKnown RBP8.18□□□□□ -1.1
LRRC28-209ENST00000558861 CAP2P40123 477 aa8.18□□□□□ -1.1
LRRC28-209ENST00000558861 GATA4P43694 442 aa8.18□□□□□ -1.1
LRRC28-209ENST00000558861 RBL2Q08999 1139 aa8.18□□□□□ -1.1
LRRC28-209ENST00000558861 CDCP2Q5VXM1 449 aa8.18□□□□□ -1.1
LRRC28-209ENST00000558861 SLFN12Q8IYM2 578 aa8.18□□□□□ -1.1
LRRC28-209ENST00000558861 NGDNQ8NEJ9 315 aaKnown RBP8.18□□□□□ -1.1
LRRC28-209ENST00000558861 LRRC59Q96AG4 307 aaKnown RBP8.18□□□□□ -1.1
LRRC28-209ENST00000558861 TM9SF2Q99805 663 aa8.18□□□□□ -1.1
LRRC28-209ENST00000558861 TNKS2Q9H2K2 1166 aa8.18□□□□□ -1.1
LRRC28-209ENST00000558861 TTC21BQ7Z4L5 1316 aa8.18□□□□□ -1.1
LRRC28-209ENST00000558861 EDC4Q6P2E9 1401 aaKnown RBP8.18□□□□□ -1.1
LRRC28-209ENST00000558861 LRP6O75581 1613 aa8.18□□□□□ -1.1
LRRC28-209ENST00000558861 MON2Q7Z3U7 1717 aa8.17□□□□□ -1.1
LRRC28-209ENST00000558861 FAM95CA0A1B0GW59 222 aa8.17□□□□□ -1.1
LRRC28-209ENST00000558861 DHX15O43143 795 aaKnown RBP8.17□□□□□ -1.1
LRRC28-209ENST00000558861 KLF4O43474 513 aa8.17□□□□□ -1.1
LRRC28-209ENST00000558861 CST3P01034 146 aaPredicted RBP8.17□□□□□ -1.1
LRRC28-209ENST00000558861 RAG1P15918 1043 aa8.17□□□□□ -1.1
LRRC28-209ENST00000558861 GUCY2CP25092 1073 aa8.17□□□□□ -1.1
LRRC28-209ENST00000558861 CDK5R2Q13319 367 aa8.17□□□□□ -1.1
LRRC28-209ENST00000558861 ZYXQ15942 572 aaKnown RBP8.17□□□□□ -1.1
LRRC28-209ENST00000558861 PPP2R5EQ16537 467 aa8.17□□□□□ -1.1
LRRC28-209ENST00000558861 PLA2G4EQ3MJ16 856 aa8.17□□□□□ -1.1
LRRC28-209ENST00000558861 TNNI3KQ59H18 835 aa8.17□□□□□ -1.1
LRRC28-209ENST00000558861 BEND4Q6ZU67 534 aa8.17□□□□□ -1.1
LRRC28-209ENST00000558861 PHACTR4Q8IZ21 702 aa8.17□□□□□ -1.1
LRRC28-209ENST00000558861 TP53INP1Q96A56 240 aa8.17□□□□□ -1.1
LRRC28-209ENST00000558861 SLC9A7Q96T83 725 aa8.17□□□□□ -1.1
LRRC28-209ENST00000558861 FOXQ1Q9C009 403 aa8.17□□□□□ -1.1
LRRC28-209ENST00000558861 USP19O94966 1318 aa8.17□□□□□ -1.1
LRRC28-209ENST00000558861 SHPRHQ149N8 1683 aa8.17□□□□□ -1.1
LRRC28-209ENST00000558861 OVOS2A0A0J9YW53 1432 aa8.16□□□□□ -1.1
LRRC28-209ENST00000558861 PIK3C2AO00443 1686 aa8.16□□□□□ -1.1
LRRC28-209ENST00000558861 TNFRSF10CO14798 259 aa8.16□□□□□ -1.1
LRRC28-209ENST00000558861 ARHGEF10O15013 1369 aa8.16□□□□□ -1.1
LRRC28-209ENST00000558861 LRIG2O94898 1065 aa8.16□□□□□ -1.1
LRRC28-209ENST00000558861 GDF11O95390 407 aa8.16□□□□□ -1.1
LRRC28-209ENST00000558861 MAP7Q14244 749 aa8.16□□□□□ -1.1
LRRC28-209ENST00000558861 OVOS2Q6IE36 1432 aa8.16□□□□□ -1.1
LRRC28-209ENST00000558861 SEZ6L2Q6UXD5 910 aa8.16□□□□□ -1.1
LRRC28-209ENST00000558861 TTC6Q86TZ1 520 aa8.16□□□□□ -1.1
LRRC28-209ENST00000558861 KTN1Q86UP2 1357 aaKnown RBP8.16□□□□□ -1.1
LRRC28-209ENST00000558861 C19orf47Q8N9M1 422 aaKnown RBP8.16□□□□□ -1.1
LRRC28-209ENST00000558861 KIF2CQ99661 725 aa8.16□□□□□ -1.1
LRRC28-209ENST00000558861 LNPKQ9C0E8 428 aa8.16□□□□□ -1.1
LRRC28-209ENST00000558861 ACTR10Q9NZ32 417 aa8.16□□□□□ -1.1
LRRC28-209ENST00000558861 CRYBG1Q9Y4K1 1723 aa8.16□□□□□ -1.1
LRRC28-209ENST00000558861 MARF1Q9Y4F3 1742 aaKnown RBP8.15□□□□□ -1.1
LRRC28-209ENST00000558861 USP54Q70EL1 1684 aa8.15□□□□□ -1.1
LRRC28-209ENST00000558861 SPATA31A6Q5VVP1 1343 aa8.15□□□□□ -1.1
LRRC28-209ENST00000558861 TTC21AQ8NDW8 1320 aa8.15□□□□□ -1.1
LRRC28-209ENST00000558861 A0A1W2PQH9 124 aa8.15□□□□□ -1.1
LRRC28-209ENST00000558861 NFKBIBQ15653 356 aa8.15□□□□□ -1.1
LRRC28-209ENST00000558861 TAB3Q8N5C8 712 aaPredicted RBP8.15□□□□□ -1.1
LRRC28-209ENST00000558861 CYB5D2Q8WUJ1 264 aa8.15□□□□□ -1.1
LRRC28-209ENST00000558861 PSMG3-AS1Q96PY0 264 aa8.15□□□□□ -1.1
LRRC28-209ENST00000558861 C1GALT1Q9NS00 363 aa8.15□□□□□ -1.1
LRRC28-209ENST00000558861 TERF2IPQ9NYB0 399 aa8.15□□□□□ -1.1
LRRC28-209ENST00000558861 SLIT3O75094 1523 aa8.14□□□□□ -1.11
LRRC28-209ENST00000558861 NSD3Q9BZ95 1437 aa8.14□□□□□ -1.11
LRRC28-209ENST00000558861 HMX2A2RU54 273 aa8.14□□□□□ -1.11
LRRC28-209ENST00000558861 FYB1O15117 783 aa8.14□□□□□ -1.11
LRRC28-209ENST00000558861 UBOX5O94941 541 aa8.14□□□□□ -1.11
LRRC28-209ENST00000558861 CASP7P55210 303 aa8.14□□□□□ -1.11
LRRC28-209ENST00000558861 UNC5AQ6ZN44 842 aa8.14□□□□□ -1.11
LRRC28-209ENST00000558861 DPH6Q7L8W6 267 aa8.14□□□□□ -1.11
LRRC28-209ENST00000558861 NME9Q86XW9 330 aa8.14□□□□□ -1.11
LRRC28-209ENST00000558861 TMEM151AQ8N4L1 468 aa8.14□□□□□ -1.11
LRRC28-209ENST00000558861 CELF2-AS1Q8N7Q2 184 aa8.14□□□□□ -1.11
LRRC28-209ENST00000558861 BAHD1Q8TBE0 780 aaPredicted RBP8.14□□□□□ -1.11
LRRC28-209ENST00000558861 MIPEPQ99797 713 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms