RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 CMTR1Q8N1G2 835 aaKnown RBP20.29■□□□□ 0.84
TPM1-214ENST00000558544 TEX13BQ9BXU2 312 aa20.29■□□□□ 0.84
TPM1-214ENST00000558544 JMJD4Q9H9V9 463 aa20.29■□□□□ 0.84
TPM1-214ENST00000558544 EFCC1Q9HA90 598 aa20.29■□□□□ 0.84
TPM1-214ENST00000558544 HPS5Q9UPZ3 1129 aa20.29■□□□□ 0.84
TPM1-214ENST00000558544 NID2Q14112 1375 aa20.28■□□□□ 0.84
TPM1-214ENST00000558544 ATP2A1O14983 1001 aa20.28■□□□□ 0.84
TPM1-214ENST00000558544 TAL1P17542 331 aaPredicted RBP20.28■□□□□ 0.84
TPM1-214ENST00000558544 PDIA3P30101 505 aaKnown RBP20.28■□□□□ 0.84
TPM1-214ENST00000558544 GNAQP50148 359 aa20.28■□□□□ 0.84
TPM1-214ENST00000558544 OAZ1P54368 228 aa20.28■□□□□ 0.84
TPM1-214ENST00000558544 RABEP1Q15276 862 aa20.28■□□□□ 0.84
TPM1-214ENST00000558544 ANKRD1Q15327 319 aa20.28■□□□□ 0.84
TPM1-214ENST00000558544 CDC37Q16543 378 aaPredicted RBP20.28■□□□□ 0.84
TPM1-214ENST00000558544 WDR78Q5VTH9 848 aa20.28■□□□□ 0.84
TPM1-214ENST00000558544 TMTC3Q6ZXV5 915 aa20.28■□□□□ 0.84
TPM1-214ENST00000558544 RIOX2Q8IUF8 465 aa20.28■□□□□ 0.84
TPM1-214ENST00000558544 CCAR1Q8IX12 1150 aaKnown RBP20.28■□□□□ 0.84
TPM1-214ENST00000558544 TRIM47Q96LD4 638 aa20.28■□□□□ 0.84
TPM1-214ENST00000558544 RBM28Q9NW13 759 aaKnown RBP20.28■□□□□ 0.84
TPM1-214ENST00000558544 PLXNA1Q9UIW2 1896 aa20.28■□□□□ 0.84
TPM1-214ENST00000558544 ZNF236Q9UL36 1845 aa20.27■□□□□ 0.84
TPM1-214ENST00000558544 CYTH3O43739 400 aa20.27■□□□□ 0.84
TPM1-214ENST00000558544 FMNL1O95466 1100 aaPredicted RBP20.27■□□□□ 0.84
TPM1-214ENST00000558544 ERCC3P19447 782 aa20.27■□□□□ 0.84
TPM1-214ENST00000558544 CDC27P30260 824 aa20.27■□□□□ 0.84
TPM1-214ENST00000558544 FCGRTP55899 365 aa20.27■□□□□ 0.84
TPM1-214ENST00000558544 STK3Q13188 491 aa20.27■□□□□ 0.84
TPM1-214ENST00000558544 NCAPG2Q86XI2 1143 aa20.27■□□□□ 0.84
TPM1-214ENST00000558544 SRBD1Q8N5C6 995 aaKnown RBP20.27■□□□□ 0.84
TPM1-214ENST00000558544 AGBL1Q96MI9 1066 aa20.27■□□□□ 0.84
TPM1-214ENST00000558544 RIOX1Q9H6W3 641 aa20.27■□□□□ 0.84
TPM1-214ENST00000558544 CWC22Q9HCG8 908 aaKnown RBP20.27■□□□□ 0.84
TPM1-214ENST00000558544 TNPO2O14787 897 aaKnown RBP20.26■□□□□ 0.83
TPM1-214ENST00000558544 ICAM1P05362 532 aa20.26■□□□□ 0.83
TPM1-214ENST00000558544 MAPK4P31152 587 aa20.26■□□□□ 0.83
TPM1-214ENST00000558544 CCT2P78371 535 aaKnown RBP20.26■□□□□ 0.83
TPM1-214ENST00000558544 HOMER1Q86YM7 354 aa20.26■□□□□ 0.83
TPM1-214ENST00000558544 CCDC82Q8N4S0 544 aa20.26■□□□□ 0.83
TPM1-214ENST00000558544 PIBF1Q8WXW3 757 aa20.26■□□□□ 0.83
TPM1-214ENST00000558544 ZNF274Q96GC6 653 aaPredicted RBP20.26■□□□□ 0.83
TPM1-214ENST00000558544 PIGSQ96S52 555 aa20.26■□□□□ 0.83
TPM1-214ENST00000558544 LZTS2Q9BRK4 669 aa20.26■□□□□ 0.83
TPM1-214ENST00000558544 SPZ1Q9BXG8 430 aa20.26■□□□□ 0.83
TPM1-214ENST00000558544 PRDM10Q9NQV6 1147 aa20.26■□□□□ 0.83
TPM1-214ENST00000558544 FAM217BQ9NTX9 383 aaPredicted RBP20.26■□□□□ 0.83
TPM1-214ENST00000558544 CCPG1Q9ULG6 757 aa20.26■□□□□ 0.83
TPM1-214ENST00000558544 TPCN1Q9ULQ1 816 aa20.26■□□□□ 0.83
TPM1-214ENST00000558544 RIPK3Q9Y572 518 aa20.26■□□□□ 0.83
TPM1-214ENST00000558544 SLC25A27O95847 323 aa20.25■□□□□ 0.83
TPM1-214ENST00000558544 ADD1P35611 737 aaKnown RBP20.25■□□□□ 0.83
TPM1-214ENST00000558544 QRICH1Q2TAL8 776 aa20.25■□□□□ 0.83
TPM1-214ENST00000558544 GPR142Q7Z601 462 aa20.25■□□□□ 0.83
TPM1-214ENST00000558544 SHCBP1Q8NEM2 672 aa20.25■□□□□ 0.83
TPM1-214ENST00000558544 NCOA5Q9HCD5 579 aaKnown RBP20.25■□□□□ 0.83
TPM1-214ENST00000558544 HOMER2Q9NSB8 354 aa20.25■□□□□ 0.83
TPM1-214ENST00000558544 TRIM17Q9Y577 477 aa20.25■□□□□ 0.83
TPM1-214ENST00000558544 CNTNAP5Q8WYK1 1306 aa20.25■□□□□ 0.83
TPM1-214ENST00000558544 ALAS1P13196 640 aa20.24■□□□□ 0.83
TPM1-214ENST00000558544 USH1GQ495M9 461 aa20.24■□□□□ 0.83
TPM1-214ENST00000558544 PLEKHH3Q7Z736 793 aa20.24■□□□□ 0.83
TPM1-214ENST00000558544 MTMR8Q96EF0 704 aa20.24■□□□□ 0.83
TPM1-214ENST00000558544 MROH8Q9H579 483 aa20.24■□□□□ 0.83
TPM1-214ENST00000558544 LCTP09848 1927 aa20.24■□□□□ 0.83
TPM1-214ENST00000558544 CCDC196A0A1B0GTZ2 297 aa20.23■□□□□ 0.83
TPM1-214ENST00000558544 ZBTB5O15062 677 aa20.23■□□□□ 0.83
TPM1-214ENST00000558544 LARGE1O95461 756 aa20.23■□□□□ 0.83
TPM1-214ENST00000558544 SMARCA1P28370 1054 aa20.23■□□□□ 0.83
TPM1-214ENST00000558544 COPB2P35606 906 aa20.23■□□□□ 0.83
TPM1-214ENST00000558544 ARHGEF6Q15052 776 aa20.23■□□□□ 0.83
TPM1-214ENST00000558544 PPP2R5BQ15173 497 aa20.23■□□□□ 0.83
TPM1-214ENST00000558544 OTOP1Q7RTM1 612 aa20.23■□□□□ 0.83
TPM1-214ENST00000558544 COA7Q96BR5 231 aa20.23■□□□□ 0.83
TPM1-214ENST00000558544 RNF146Q9NTX7 359 aa20.23■□□□□ 0.83
TPM1-214ENST00000558544 HTTP42858 3142 aa20.23■□□□□ 0.83
TPM1-214ENST00000558544 ME3Q16798 604 aa20.22■□□□□ 0.83
TPM1-214ENST00000558544 FBXO11Q86XK2 927 aa20.22■□□□□ 0.83
TPM1-214ENST00000558544 RRP36Q96EU6 259 aaKnown RBP20.22■□□□□ 0.83
TPM1-214ENST00000558544 TRERF1Q96PN7 1200 aa20.22■□□□□ 0.83
TPM1-214ENST00000558544 SLKQ9H2G2 1235 aaPredicted RBP20.22■□□□□ 0.83
TPM1-214ENST00000558544 IVNS1ABPQ9Y6Y0 642 aa20.22■□□□□ 0.83
TPM1-214ENST00000558544 hCG_1642624A0A1W2PR95 340 aa20.21■□□□□ 0.83
TPM1-214ENST00000558544 ST18O60284 1047 aa20.21■□□□□ 0.83
TPM1-214ENST00000558544 PFKFB2O60825 505 aa20.21■□□□□ 0.83
TPM1-214ENST00000558544 PPP1R11O60927 126 aaPredicted RBP20.21■□□□□ 0.83
TPM1-214ENST00000558544 PRKCZQ05513 592 aa20.21■□□□□ 0.83
TPM1-214ENST00000558544 FUT2Q10981 343 aa20.21■□□□□ 0.83
TPM1-214ENST00000558544 SCRN1Q12765 414 aa20.21■□□□□ 0.83
TPM1-214ENST00000558544 TKFCQ3LXA3 575 aa20.21■□□□□ 0.83
TPM1-214ENST00000558544 CTU1Q7Z7A3 348 aaKnown RBP20.21■□□□□ 0.83
TPM1-214ENST00000558544 SEC63Q9UGP8 760 aaKnown RBP20.21■□□□□ 0.83
TPM1-214ENST00000558544 GABRQQ9UN88 632 aa20.21■□□□□ 0.83
TPM1-214ENST00000558544 PNMA6FA0A0J9YX94 578 aa20.21■□□□□ 0.83
TPM1-214ENST00000558544 GNRH1P01148 92 aa20.21■□□□□ 0.83
TPM1-214ENST00000558544 PTPREP23469 700 aa20.21■□□□□ 0.83
TPM1-214ENST00000558544 MUM1L1Q5H9M0 696 aa20.21■□□□□ 0.83
TPM1-214ENST00000558544 CHST13Q8NET6 341 aa20.21■□□□□ 0.83
TPM1-214ENST00000558544 MMP19Q99542 508 aa20.21■□□□□ 0.83
TPM1-214ENST00000558544 AMNQ9BXJ7 453 aa20.21■□□□□ 0.83
TPM1-214ENST00000558544 ACAD9Q9H845 621 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms