RNA–Protein interactions for RNA: ENST00000558294.1

SHF-203, Transcript of Src homology 2 domain containing F, humanhuman

APPRIS ALT2 TSL 2

Gene SHF, Length 604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-203ENST00000558294 TSHZ3Q63HK5 1081 aa12.74□□□□□ -0.37
SHF-203ENST00000558294 MFSD5Q6N075 450 aa12.74□□□□□ -0.37
SHF-203ENST00000558294 ARMCX2Q7L311 632 aa12.74□□□□□ -0.37
SHF-203ENST00000558294 ZNF444Q8N0Y2 327 aaPredicted RBP12.74□□□□□ -0.37
SHF-203ENST00000558294 LRRC47Q8N1G4 583 aaKnown RBP12.74□□□□□ -0.37
SHF-203ENST00000558294 ANKRD35Q8N283 1001 aa12.74□□□□□ -0.37
SHF-203ENST00000558294 PCSK9Q8NBP7 692 aaKnown RBP12.74□□□□□ -0.37
SHF-203ENST00000558294 GMCL1P1Q8NEA9 526 aa12.74□□□□□ -0.37
SHF-203ENST00000558294 CHST13Q8NET6 341 aa12.74□□□□□ -0.37
SHF-203ENST00000558294 GLT1D1Q96MS3 346 aa12.74□□□□□ -0.37
SHF-203ENST00000558294 KATNBL1Q9H079 304 aa12.74□□□□□ -0.37
SHF-203ENST00000558294 ZNF287Q9HBT7 754 aa12.74□□□□□ -0.37
SHF-203ENST00000558294 FBXO40Q9UH90 709 aa12.74□□□□□ -0.37
SHF-203ENST00000558294 CTDP1Q9Y5B0 961 aaPredicted RBP12.74□□□□□ -0.37
SHF-203ENST00000558294 MCM3APO60318 1980 aa12.74□□□□□ -0.37
SHF-203ENST00000558294 ZFYP08048 801 aaPredicted RBP12.73□□□□□ -0.37
SHF-203ENST00000558294 NKX3-2P78367 333 aa12.73□□□□□ -0.37
SHF-203ENST00000558294 GRIN2CQ14957 1233 aa12.73□□□□□ -0.37
SHF-203ENST00000558294 SLFN13Q68D06 897 aa12.73□□□□□ -0.37
SHF-203ENST00000558294 C16orf59Q7L2K0 433 aa12.73□□□□□ -0.37
SHF-203ENST00000558294 CCDC144CPQ8IYA2 1237 aa12.73□□□□□ -0.37
SHF-203ENST00000558294 IFNL3Q8IZI9 196 aa12.73□□□□□ -0.37
SHF-203ENST00000558294 GPATCH3Q96I76 525 aa12.73□□□□□ -0.37
SHF-203ENST00000558294 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.73□□□□□ -0.373e-6■■□□□ 13.4
SHF-203ENST00000558294 DCTPP1Q9H773 170 aa12.73□□□□□ -0.37
SHF-203ENST00000558294 SPC25Q9HBM1 224 aa12.73□□□□□ -0.37
SHF-203ENST00000558294 LRRC37A2A6NM11 1700 aa12.72□□□□□ -0.37
SHF-203ENST00000558294 A0A0U1RQG5 324 aaPredicted RBP12.72□□□□□ -0.37
SHF-203ENST00000558294 PATL2C9JE40 543 aaKnown RBP12.72□□□□□ -0.37
SHF-203ENST00000558294 ARVCFO00192 962 aa12.72□□□□□ -0.37
SHF-203ENST00000558294 CTAGE5O15320 804 aa12.72□□□□□ -0.37
SHF-203ENST00000558294 APPP05067 770 aa12.72□□□□□ -0.37
SHF-203ENST00000558294 BMP3P12645 472 aa12.72□□□□□ -0.37
SHF-203ENST00000558294 CNTN2Q02246 1040 aa12.72□□□□□ -0.37
SHF-203ENST00000558294 PPIGQ13427 754 aaKnown RBP eCLIP12.72□□□□□ -0.379e-8■■■■□ 19.4
SHF-203ENST00000558294 TMEM240Q5SV17 173 aa12.72□□□□□ -0.37
SHF-203ENST00000558294 RASIP1Q5U651 963 aa12.72□□□□□ -0.37
SHF-203ENST00000558294 FAM133AQ8N9E0 248 aa12.72□□□□□ -0.37
SHF-203ENST00000558294 NEDD1Q8NHV4 660 aa12.72□□□□□ -0.37
SHF-203ENST00000558294 ZNF536O15090 1300 aa12.71□□□□□ -0.37
SHF-203ENST00000558294 TSPY3P0CV98 308 aa12.71□□□□□ -0.37
SHF-203ENST00000558294 TSPY8P0CW00 308 aa12.71□□□□□ -0.37
SHF-203ENST00000558294 FDX1P10109 184 aa12.71□□□□□ -0.37
SHF-203ENST00000558294 CSF2RAP15509 400 aa12.71□□□□□ -0.37
SHF-203ENST00000558294 GNASQ5JWF2 1037 aa12.71□□□□□ -0.37
SHF-203ENST00000558294 FAM126BQ8IXS8 530 aa12.71□□□□□ -0.37
SHF-203ENST00000558294 USP38Q8NB14 1042 aa12.71□□□□□ -0.37
SHF-203ENST00000558294 VTI1AQ96AJ9 217 aa12.71□□□□□ -0.37
SHF-203ENST00000558294 TIFAQ96CG3 184 aa12.71□□□□□ -0.37
SHF-203ENST00000558294 SEC62Q99442 399 aaKnown RBP12.71□□□□□ -0.37
SHF-203ENST00000558294 ZNF576Q9H609 170 aa12.71□□□□□ -0.37
SHF-203ENST00000558294 ACAD9Q9H845 621 aa12.71□□□□□ -0.37
SHF-203ENST00000558294 HOMER2Q9NSB8 354 aa12.71□□□□□ -0.37
SHF-203ENST00000558294 ASTN1O14525 1302 aa12.7□□□□□ -0.38
SHF-203ENST00000558294 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.7□□□□□ -0.38
SHF-203ENST00000558294 SOWAHBA6NEL2 793 aa12.7□□□□□ -0.38
SHF-203ENST00000558294 TMEM232C9JQI7 657 aa12.7□□□□□ -0.38
SHF-203ENST00000558294 CD4P01730 458 aa12.7□□□□□ -0.38
SHF-203ENST00000558294 STAT2P52630 851 aa12.7□□□□□ -0.38
SHF-203ENST00000558294 TFAP4Q01664 338 aa12.7□□□□□ -0.38
SHF-203ENST00000558294 PDE4BQ07343 736 aa12.7□□□□□ -0.38
SHF-203ENST00000558294 CCDC174Q6PII3 467 aa12.7□□□□□ -0.38
SHF-203ENST00000558294 TMEM199Q8N511 208 aa12.7□□□□□ -0.38
SHF-203ENST00000558294 SLC43A3Q8NBI5 491 aa12.7□□□□□ -0.38
SHF-203ENST00000558294 GMCL1Q96IK5 515 aa12.7□□□□□ -0.38
SHF-203ENST00000558294 AGBL1Q96MI9 1066 aa12.7□□□□□ -0.38
SHF-203ENST00000558294 PBX4Q9BYU1 374 aa12.7□□□□□ -0.38
SHF-203ENST00000558294 PPP1R12CQ9BZL4 782 aa12.7□□□□□ -0.38
SHF-203ENST00000558294 A1CFQ9NQ94 594 aaKnown RBP12.7□□□□□ -0.38
SHF-203ENST00000558294 GRXCR1A8MXD5 290 aa12.69□□□□□ -0.38
SHF-203ENST00000558294 TLR3O15455 904 aaKnown RBP12.69□□□□□ -0.38
SHF-203ENST00000558294 ACRP10323 421 aa12.69□□□□□ -0.38
SHF-203ENST00000558294 PBX2P40425 430 aa12.69□□□□□ -0.38
SHF-203ENST00000558294 BEX3Q00994 111 aa12.69□□□□□ -0.38
SHF-203ENST00000558294 TNFAIP2Q03169 654 aa12.69□□□□□ -0.38
SHF-203ENST00000558294 PPARAQ07869 468 aa12.69□□□□□ -0.38
SHF-203ENST00000558294 LRRFIP1Q32MZ4 808 aaKnown RBP12.69□□□□□ -0.38
SHF-203ENST00000558294 PSRC1Q6PGN9 363 aaPredicted RBP12.69□□□□□ -0.38
SHF-203ENST00000558294 FAM160B2Q86V87 743 aa12.69□□□□□ -0.38
SHF-203ENST00000558294 PI4K2BQ8TCG2 481 aa12.69□□□□□ -0.38
SHF-203ENST00000558294 CHURC1Q8WUH1 139 aa12.69□□□□□ -0.38
SHF-203ENST00000558294 STAG1Q8WVM7 1258 aa12.69□□□□□ -0.38
SHF-203ENST00000558294 SYMPKQ92797 1274 aaKnown RBP12.69□□□□□ -0.38
SHF-203ENST00000558294 NACAP1Q9BZK3 213 aa12.69□□□□□ -0.38
SHF-203ENST00000558294 NAPBQ9H115 298 aa12.69□□□□□ -0.38
SHF-203ENST00000558294 RNF146Q9NTX7 359 aa12.69□□□□□ -0.38
SHF-203ENST00000558294 GNEQ9Y223 722 aaKnown RBP12.69□□□□□ -0.38
SHF-203ENST00000558294 TTC41PQ6P2S7 1318 aa12.68□□□□□ -0.38
SHF-203ENST00000558294 ASB14A6NK59 587 aa12.68□□□□□ -0.38
SHF-203ENST00000558294 PLA2G6O60733 806 aa12.68□□□□□ -0.38
SHF-203ENST00000558294 SLC3A2P08195 630 aaKnown RBP12.68□□□□□ -0.38
SHF-203ENST00000558294 CYP2C18P33260 490 aa12.68□□□□□ -0.38
SHF-203ENST00000558294 SLC1A4P43007 532 aa12.68□□□□□ -0.38
SHF-203ENST00000558294 TKFCQ3LXA3 575 aa12.68□□□□□ -0.38
SHF-203ENST00000558294 ZMYM1Q5SVZ6 1142 aa12.68□□□□□ -0.38
SHF-203ENST00000558294 CXCL17Q6UXB2 119 aa12.68□□□□□ -0.38
SHF-203ENST00000558294 ZNF365Q70YC5 407 aa12.68□□□□□ -0.38
SHF-203ENST00000558294 TLK2Q86UE8 772 aa12.68□□□□□ -0.38
SHF-203ENST00000558294 TRERF1Q96PN7 1200 aa12.68□□□□□ -0.38
SHF-203ENST00000558294 IL23AQ9NPF7 189 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms