RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 MPRIPQ6WCQ1 1025 aa12.85□□□□□ -0.35
CSPG4P12-201ENST00000558282 TSPYL6Q8N831 410 aa12.85□□□□□ -0.35
CSPG4P12-201ENST00000558282 CCDC124Q96CT7 223 aaKnown RBP12.85□□□□□ -0.35
CSPG4P12-201ENST00000558282 FAM167BQ9BTA0 163 aa12.85□□□□□ -0.35
CSPG4P12-201ENST00000558282 OSBPL5Q9H0X9 879 aaPredicted RBP12.85□□□□□ -0.35
CSPG4P12-201ENST00000558282 C19orf44Q9H6X5 657 aa12.85□□□□□ -0.35
CSPG4P12-201ENST00000558282 UHRF1BP1Q6BDS2 1440 aa12.84□□□□□ -0.35
CSPG4P12-201ENST00000558282 GGCXP38435 758 aa12.84□□□□□ -0.35
CSPG4P12-201ENST00000558282 LETM2Q2VYF4 491 aa12.84□□□□□ -0.35
CSPG4P12-201ENST00000558282 LMBR1LQ6UX01 489 aa12.84□□□□□ -0.35
CSPG4P12-201ENST00000558282 AEBP2Q6ZN18 517 aaPredicted RBP12.84□□□□□ -0.35
CSPG4P12-201ENST00000558282 PIK3AP1Q6ZUJ8 805 aa12.84□□□□□ -0.35
CSPG4P12-201ENST00000558282 DSCC1Q9BVC3 393 aa12.84□□□□□ -0.35
CSPG4P12-201ENST00000558282 NUB1Q9Y5A7 615 aa12.84□□□□□ -0.35
CSPG4P12-201ENST00000558282 MCF2LO15068 1137 aa12.84□□□□□ -0.35
CSPG4P12-201ENST00000558282 PPP6R2O75170 966 aa12.84□□□□□ -0.35
CSPG4P12-201ENST00000558282 GSPT1P15170 499 aaKnown RBP12.84□□□□□ -0.35
CSPG4P12-201ENST00000558282 RBL2Q08999 1139 aa12.84□□□□□ -0.35
CSPG4P12-201ENST00000558282 C2orf54Q08AI8 447 aa12.84□□□□□ -0.35
CSPG4P12-201ENST00000558282 KRT25Q7Z3Z0 450 aa12.84□□□□□ -0.35
CSPG4P12-201ENST00000558282 DYDC2Q96IM9 177 aa12.84□□□□□ -0.35
CSPG4P12-201ENST00000558282 CCDC188H7C350 402 aa12.84□□□□□ -0.35
CSPG4P12-201ENST00000558282 PER1O15534 1290 aaPredicted RBP12.84□□□□□ -0.35
CSPG4P12-201ENST00000558282 MMEP08473 750 aa12.84□□□□□ -0.35
CSPG4P12-201ENST00000558282 RXRAP19793 462 aa12.84□□□□□ -0.35
CSPG4P12-201ENST00000558282 HMGB2P26583 209 aaKnown RBP12.84□□□□□ -0.35
CSPG4P12-201ENST00000558282 KLC1Q07866 573 aa12.84□□□□□ -0.35
CSPG4P12-201ENST00000558282 GRAMD1BQ3KR37 738 aa12.84□□□□□ -0.35
CSPG4P12-201ENST00000558282 C10orf76Q5T2E6 689 aa12.84□□□□□ -0.35
CSPG4P12-201ENST00000558282 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.84□□□□□ -0.35
CSPG4P12-201ENST00000558282 IFT122Q9HBG6 1241 aa12.84□□□□□ -0.35
CSPG4P12-201ENST00000558282 EXOC7Q9UPT5 735 aa12.84□□□□□ -0.35
CSPG4P12-201ENST00000558282 MAGEB6P1A0A0J9YX57 407 aa12.84□□□□□ -0.35
CSPG4P12-201ENST00000558282 ENO4A6NNW6 628 aa12.84□□□□□ -0.35
CSPG4P12-201ENST00000558282 HNRNPCL1O60812 293 aaKnown RBP12.84□□□□□ -0.35
CSPG4P12-201ENST00000558282 RASA3Q14644 834 aa12.84□□□□□ -0.35
CSPG4P12-201ENST00000558282 NUGGCQ68CJ6 796 aa12.84□□□□□ -0.35
CSPG4P12-201ENST00000558282 MCF2L2Q86YR7 1114 aa12.84□□□□□ -0.35
CSPG4P12-201ENST00000558282 PPWD1Q96BP3 646 aaKnown RBP12.84□□□□□ -0.35
CSPG4P12-201ENST00000558282 ANKRD2Q9GZV1 360 aa12.84□□□□□ -0.35
CSPG4P12-201ENST00000558282 MAGEF1Q9HAY2 307 aa12.84□□□□□ -0.35
CSPG4P12-201ENST00000558282 ZCCHC17Q9NP64 241 aaKnown RBP12.84□□□□□ -0.35
CSPG4P12-201ENST00000558282 HARSP12081 509 aaKnown RBP12.83□□□□□ -0.35
CSPG4P12-201ENST00000558282 KCNJ6P48051 423 aa12.83□□□□□ -0.35
CSPG4P12-201ENST00000558282 MRPL12P52815 198 aaKnown RBP12.83□□□□□ -0.35
CSPG4P12-201ENST00000558282 ARHGEF25Q86VW2 580 aa12.83□□□□□ -0.35
CSPG4P12-201ENST00000558282 FAM212AQ96EL1 285 aa12.83□□□□□ -0.35
CSPG4P12-201ENST00000558282 RCOR1Q9UKL0 485 aa12.83□□□□□ -0.35
CSPG4P12-201ENST00000558282 BAG5Q9UL15 447 aa12.83□□□□□ -0.35
CSPG4P12-201ENST00000558282 KDM5BQ9UGL1 1544 aa12.83□□□□□ -0.36
CSPG4P12-201ENST00000558282 HOXA7P31268 230 aaPredicted RBP12.83□□□□□ -0.36
CSPG4P12-201ENST00000558282 DCUN1D2Q6PH85 259 aa12.83□□□□□ -0.36
CSPG4P12-201ENST00000558282 DZIP3Q86Y13 1208 aaKnown RBP12.83□□□□□ -0.36
CSPG4P12-201ENST00000558282 NOSTRINQ8IVI9 506 aa12.83□□□□□ -0.36
CSPG4P12-201ENST00000558282 SYT2Q8N9I0 419 aaPredicted RBP12.83□□□□□ -0.36
CSPG4P12-201ENST00000558282 RSAD2Q8WXG1 361 aa12.83□□□□□ -0.36
CSPG4P12-201ENST00000558282 FMO2Q99518 471 aa12.83□□□□□ -0.36
CSPG4P12-201ENST00000558282 POLR3EQ9NVU0 708 aa12.83□□□□□ -0.36
CSPG4P12-201ENST00000558282 ABCC10Q5T3U5 1492 aa12.83□□□□□ -0.36
CSPG4P12-201ENST00000558282 TARSL2A2RTX5 802 aaKnown RBP12.83□□□□□ -0.36
CSPG4P12-201ENST00000558282 ATP5J2-PTCD1G3V325 749 aa12.83□□□□□ -0.36
CSPG4P12-201ENST00000558282 GYG2O15488 501 aa12.83□□□□□ -0.36
CSPG4P12-201ENST00000558282 CTIFO43310 598 aaKnown RBP12.83□□□□□ -0.36
CSPG4P12-201ENST00000558282 PTCD1O75127 700 aaKnown RBP12.83□□□□□ -0.36
CSPG4P12-201ENST00000558282 MMEL1Q495T6 779 aa12.83□□□□□ -0.36
CSPG4P12-201ENST00000558282 HERC4Q5GLZ8 1057 aaPredicted RBP12.83□□□□□ -0.36
CSPG4P12-201ENST00000558282 LCA5Q86VQ0 697 aa12.83□□□□□ -0.36
CSPG4P12-201ENST00000558282 FNBP1Q96RU3 617 aa12.83□□□□□ -0.36
CSPG4P12-201ENST00000558282 MOV10L1Q9BXT6 1211 aaKnown RBP12.83□□□□□ -0.36
CSPG4P12-201ENST00000558282 LRWD1Q9UFC0 647 aa12.83□□□□□ -0.36
CSPG4P12-201ENST00000558282 SLC12A2P55011 1212 aa12.83□□□□□ -0.36
CSPG4P12-201ENST00000558282 SLC20A2Q08357 652 aa12.83□□□□□ -0.36
CSPG4P12-201ENST00000558282 DPCR1Q3MIW9 517 aa12.83□□□□□ -0.36
CSPG4P12-201ENST00000558282 ANO5Q75V66 913 aa12.83□□□□□ -0.36
CSPG4P12-201ENST00000558282 UHMK1Q8TAS1 419 aaKnown RBP12.83□□□□□ -0.36
CSPG4P12-201ENST00000558282 VTI1AQ96AJ9 217 aa12.83□□□□□ -0.36
CSPG4P12-201ENST00000558282 HOOK2Q96ED9 719 aa12.83□□□□□ -0.36
CSPG4P12-201ENST00000558282 ZMYND12Q9H0C1 365 aa12.83□□□□□ -0.36
CSPG4P12-201ENST00000558282 TPCN1Q9ULQ1 816 aa12.83□□□□□ -0.36
CSPG4P12-201ENST00000558282 SH3BP5O60239 455 aa12.82□□□□□ -0.36
CSPG4P12-201ENST00000558282 MCF2P10911 925 aa12.82□□□□□ -0.36
CSPG4P12-201ENST00000558282 TMED10P49755 219 aaKnown RBP12.82□□□□□ -0.36
CSPG4P12-201ENST00000558282 RAD23BP54727 409 aa12.82□□□□□ -0.36
CSPG4P12-201ENST00000558282 AP2B1P63010 937 aa12.82□□□□□ -0.36
CSPG4P12-201ENST00000558282 CABP7Q86V35 215 aa12.82□□□□□ -0.36
CSPG4P12-201ENST00000558282 PLA2G4DQ86XP0 818 aa12.82□□□□□ -0.36
CSPG4P12-201ENST00000558282 MAGOHBQ96A72 148 aaKnown RBP12.82□□□□□ -0.36
CSPG4P12-201ENST00000558282 GRAMD1AQ96CP6 724 aa12.82□□□□□ -0.36
CSPG4P12-201ENST00000558282 PITPNM3Q9BZ71 974 aa12.82□□□□□ -0.36
CSPG4P12-201ENST00000558282 PCDHA5Q9Y5H7 936 aa12.82□□□□□ -0.36
CSPG4P12-201ENST00000558282 DKC1O60832 514 aaKnown RBP eCLIP12.82□□□□□ -0.36
CSPG4P12-201ENST00000558282 NDUFA10O95299 355 aa12.82□□□□□ -0.36
CSPG4P12-201ENST00000558282 PPP2R2AP63151 447 aa12.82□□□□□ -0.36
CSPG4P12-201ENST00000558282 ACBD5Q5T8D3 534 aaPredicted RBP12.82□□□□□ -0.36
CSPG4P12-201ENST00000558282 NXNQ6DKJ4 435 aa12.82□□□□□ -0.36
CSPG4P12-201ENST00000558282 APPBP2Q92624 585 aa12.82□□□□□ -0.36
CSPG4P12-201ENST00000558282 ANLNQ9NQW6 1124 aa12.82□□□□□ -0.36
CSPG4P12-201ENST00000558282 RAB20Q9NX57 234 aa12.82□□□□□ -0.36
CSPG4P12-201ENST00000558282 PLAAQ9Y263 795 aa12.82□□□□□ -0.36
CSPG4P12-201ENST00000558282 ORC6Q9Y5N6 252 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms