RNA–Protein interactions for RNA: ENST00000558248.5

LRRC28-205, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-205ENST00000558248 SSU72P8A0A1W2PR75 194 aa5.57□□□□□ -1.52
LRRC28-205ENST00000558248 LRRN2O75325 713 aa5.57□□□□□ -1.52
LRRC28-205ENST00000558248 NME1P15531 152 aaKnown RBP5.57□□□□□ -1.52
LRRC28-205ENST00000558248 POLR2BP30876 1174 aaKnown RBP5.57□□□□□ -1.52
LRRC28-205ENST00000558248 HDLBPQ00341 1268 aaKnown RBP5.57□□□□□ -1.52
LRRC28-205ENST00000558248 DUSP4Q13115 394 aa5.57□□□□□ -1.52
LRRC28-205ENST00000558248 EXOC8Q8IYI6 725 aa5.57□□□□□ -1.52
LRRC28-205ENST00000558248 CRBNQ96SW2 442 aa5.57□□□□□ -1.52
LRRC28-205ENST00000558248 C3P01024 1663 aa5.56□□□□□ -1.52
LRRC28-205ENST00000558248 TLDC2A0PJX2 215 aa5.56□□□□□ -1.52
LRRC28-205ENST00000558248 TNFRSF10CO14798 259 aa5.56□□□□□ -1.52
LRRC28-205ENST00000558248 TPD52L2O43399 206 aaKnown RBP5.56□□□□□ -1.52
LRRC28-205ENST00000558248 IBSPP21815 317 aaPredicted RBP5.56□□□□□ -1.52
LRRC28-205ENST00000558248 IGBP1P78318 339 aa5.56□□□□□ -1.52
LRRC28-205ENST00000558248 TMEM67Q5HYA8 995 aa5.56□□□□□ -1.52
LRRC28-205ENST00000558248 NBPF12Q5TAG4 269 aaPredicted RBP5.56□□□□□ -1.52
LRRC28-205ENST00000558248 SDE2Q6IQ49 451 aa5.56□□□□□ -1.52
LRRC28-205ENST00000558248 OGFOD2Q6N063 350 aa5.56□□□□□ -1.52
LRRC28-205ENST00000558248 MPZL3Q6UWV2 235 aa5.56□□□□□ -1.52
LRRC28-205ENST00000558248 NT5DC4Q86YG4 428 aa5.56□□□□□ -1.52
LRRC28-205ENST00000558248 OXR1Q8N573 874 aa5.56□□□□□ -1.52
LRRC28-205ENST00000558248 SYTL5Q8TDW5 730 aaPredicted RBP5.56□□□□□ -1.52
LRRC28-205ENST00000558248 SLC6A18Q96N87 628 aa5.56□□□□□ -1.52
LRRC28-205ENST00000558248 TM9SF2Q99805 663 aa5.56□□□□□ -1.52
LRRC28-205ENST00000558248 KRTAP4-12Q9BQ66 201 aa5.56□□□□□ -1.52
LRRC28-205ENST00000558248 SUGT1Q9Y2Z0 365 aa5.56□□□□□ -1.52
LRRC28-205ENST00000558248 PCDHA11Q9Y5I1 949 aa5.56□□□□□ -1.52
LRRC28-205ENST00000558248 DNAJC25-GNG10A0A024R161 153 aa5.55□□□□□ -1.52
LRRC28-205ENST00000558248 WASH4PA8MWX3 477 aa5.55□□□□□ -1.52
LRRC28-205ENST00000558248 GLI1P08151 1106 aa5.55□□□□□ -1.52
LRRC28-205ENST00000558248 ATP2B1P20020 1258 aa5.55□□□□□ -1.52
LRRC28-205ENST00000558248 HK2P52789 917 aa5.55□□□□□ -1.52
LRRC28-205ENST00000558248 RACK1P63244 317 aaKnown RBP5.55□□□□□ -1.52
LRRC28-205ENST00000558248 PAK2Q13177 524 aa5.55□□□□□ -1.52
LRRC28-205ENST00000558248 INTS3Q68E01 1043 aaKnown RBP5.55□□□□□ -1.52
LRRC28-205ENST00000558248 AFAP1Q8N556 730 aa5.55□□□□□ -1.52
LRRC28-205ENST00000558248 TAB3Q8N5C8 712 aaPredicted RBP5.55□□□□□ -1.52
LRRC28-205ENST00000558248 ZNF655Q8N720 491 aaPredicted RBP5.55□□□□□ -1.52
LRRC28-205ENST00000558248 SLC43A3Q8NBI5 491 aa5.55□□□□□ -1.52
LRRC28-205ENST00000558248 DAGLBQ8NCG7 672 aa5.55□□□□□ -1.52
LRRC28-205ENST00000558248 GPRASP2Q96D09 838 aa5.55□□□□□ -1.52
LRRC28-205ENST00000558248 VWCEQ96DN2 955 aa5.55□□□□□ -1.52
LRRC28-205ENST00000558248 TINF2Q9BSI4 451 aa5.55□□□□□ -1.52
LRRC28-205ENST00000558248 ANTXR1Q9H6X2 564 aa5.55□□□□□ -1.52
LRRC28-205ENST00000558248 CCSER2Q9H7U1 834 aa5.55□□□□□ -1.52
LRRC28-205ENST00000558248 GOLGA2P5Q9HBQ8 144 aa5.55□□□□□ -1.52
LRRC28-205ENST00000558248 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.55□□□□□ -1.52
LRRC28-205ENST00000558248 SHISA3A0PJX4 238 aa5.54□□□□□ -1.52
LRRC28-205ENST00000558248 LRRC10BA6NIK2 292 aa5.54□□□□□ -1.52
LRRC28-205ENST00000558248 FARP2O94887 1054 aaPredicted RBP5.54□□□□□ -1.52
LRRC28-205ENST00000558248 PCBP3P57721 371 aaKnown RBP5.54□□□□□ -1.52
LRRC28-205ENST00000558248 GNL2Q13823 731 aaKnown RBP5.54□□□□□ -1.52
LRRC28-205ENST00000558248 PKN1Q16512 942 aa5.54□□□□□ -1.52
LRRC28-205ENST00000558248 PTPROQ16827 1216 aa5.54□□□□□ -1.52
LRRC28-205ENST00000558248 NBPF9Q3BBW0 867 aa5.54□□□□□ -1.52
LRRC28-205ENST00000558248 RALGPS1Q5JS13 557 aa5.54□□□□□ -1.52
LRRC28-205ENST00000558248 RNF111Q6ZNA4 994 aa5.54□□□□□ -1.52
LRRC28-205ENST00000558248 METTL16Q86W50 562 aaKnown RBP5.54□□□□□ -1.52
LRRC28-205ENST00000558248 POU5F2Q8N7G0 328 aa5.54□□□□□ -1.52
LRRC28-205ENST00000558248 PDZD8Q8NEN9 1154 aa5.54□□□□□ -1.52
LRRC28-205ENST00000558248 ABHD4Q8TB40 342 aa5.54□□□□□ -1.52
LRRC28-205ENST00000558248 ZCRB1Q8TBF4 217 aaKnown RBP5.54□□□□□ -1.52
LRRC28-205ENST00000558248 MYLIPQ8WY64 445 aa5.54□□□□□ -1.52
LRRC28-205ENST00000558248 SLC9A7Q96T83 725 aa5.54□□□□□ -1.52
LRRC28-205ENST00000558248 SLC38A3Q99624 504 aa5.54□□□□□ -1.52
LRRC28-205ENST00000558248 BRINP2Q9C0B6 783 aa5.54□□□□□ -1.52
LRRC28-205ENST00000558248 PRDM16Q9HAZ2 1276 aa5.54□□□□□ -1.52
LRRC28-205ENST00000558248 MAGEC2Q9UBF1 373 aaPredicted RBP5.54□□□□□ -1.52
LRRC28-205ENST00000558248 FBXL21Q9UKT6 434 aa5.54□□□□□ -1.52
LRRC28-205ENST00000558248 PPT2Q9UMR5 302 aa5.54□□□□□ -1.52
LRRC28-205ENST00000558248 PCDHB12Q9Y5F1 795 aa5.54□□□□□ -1.52
LRRC28-205ENST00000558248 ALKQ9UM73 1620 aa5.54□□□□□ -1.52
LRRC28-205ENST00000558248 FITM1A5D6W6 292 aa5.53□□□□□ -1.52
LRRC28-205ENST00000558248 SIGLEC6O43699 453 aa5.53□□□□□ -1.52
LRRC28-205ENST00000558248 YBX3P16989 372 aaKnown RBP eCLIP5.53□□□□□ -1.52
LRRC28-205ENST00000558248 ENDOUP21128 410 aaKnown RBP5.53□□□□□ -1.52
LRRC28-205ENST00000558248 GUCY2CP25092 1073 aa5.53□□□□□ -1.52
LRRC28-205ENST00000558248 ANAPC15P60006 121 aa5.53□□□□□ -1.52
LRRC28-205ENST00000558248 CHRNEQ04844 493 aa5.53□□□□□ -1.52
LRRC28-205ENST00000558248 BBS9Q3SYG4 887 aa5.53□□□□□ -1.52
LRRC28-205ENST00000558248 HSP90AB2PQ58FF8 381 aa5.53□□□□□ -1.52
LRRC28-205ENST00000558248 EGFLAMQ63HQ2 1017 aa5.53□□□□□ -1.52
LRRC28-205ENST00000558248 SPPL2CQ8IUH8 684 aa5.53□□□□□ -1.52
LRRC28-205ENST00000558248 CCDC144CPQ8IYA2 1237 aa5.53□□□□□ -1.52
LRRC28-205ENST00000558248 SMARCC1Q92922 1105 aaPredicted RBP5.53□□□□□ -1.52
LRRC28-205ENST00000558248 ZNF512BQ96KM6 892 aaPredicted RBP5.53□□□□□ -1.52
LRRC28-205ENST00000558248 HDAC8Q9BY41 377 aa5.53□□□□□ -1.52
LRRC28-205ENST00000558248 ADAMTS10Q9H324 1103 aa5.53□□□□□ -1.52
LRRC28-205ENST00000558248 C19orf73Q9NVV2 129 aa5.53□□□□□ -1.52
LRRC28-205ENST00000558248 KLHL42Q9P2K6 505 aa5.53□□□□□ -1.52
LRRC28-205ENST00000558248 SUCOQ9UBS9 1254 aaKnown RBP5.53□□□□□ -1.52
LRRC28-205ENST00000558248 EFR3BQ9Y2G0 817 aa5.53□□□□□ -1.52
LRRC28-205ENST00000558248 TBX22Q9Y458 520 aa5.53□□□□□ -1.52
LRRC28-205ENST00000558248 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.53□□□□□ -1.52
LRRC28-205ENST00000558248 PTPRKQ15262 1439 aa5.53□□□□□ -1.52
LRRC28-205ENST00000558248 ZMYM3Q14202 1370 aa5.53□□□□□ -1.52
LRRC28-205ENST00000558248 SBNO2Q9Y2G9 1366 aa5.53□□□□□ -1.52
LRRC28-205ENST00000558248 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.53□□□□□ -1.52
LRRC28-205ENST00000558248 TCOF1Q13428 1488 aaKnown RBP5.52□□□□□ -1.53
LRRC28-205ENST00000558248 SHANK2Q9UPX8 1470 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms