RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 JAKMIP3Q5VZ66 844 aa23.34■■□□□ 1.33
SNRPA1-205ENST00000558036 HOOK2Q96ED9 719 aa23.34■■□□□ 1.33
SNRPA1-205ENST00000558036 FBXO28Q9NVF7 368 aa23.34■■□□□ 1.33
SNRPA1-205ENST00000558036 PCDHA1Q9Y5I3 950 aa23.34■■□□□ 1.33
SNRPA1-205ENST00000558036 ATAD5Q96QE3 1844 aa23.34■■□□□ 1.33
SNRPA1-205ENST00000558036 A0A1W2PQ27 194 aa23.33■■□□□ 1.33
SNRPA1-205ENST00000558036 A0A1W2PQ64 194 aa23.33■■□□□ 1.33
SNRPA1-205ENST00000558036 A0A1W2PQD8 194 aa23.33■■□□□ 1.33
SNRPA1-205ENST00000558036 MCM7P33993 719 aa23.33■■□□□ 1.33
SNRPA1-205ENST00000558036 ADCY7P51828 1080 aa23.33■■□□□ 1.33
SNRPA1-205ENST00000558036 NDUFA8P51970 172 aa23.33■■□□□ 1.33
SNRPA1-205ENST00000558036 SPECC1Q5M775 1068 aa23.33■■□□□ 1.33
SNRPA1-205ENST00000558036 BTNL9Q6UXG8 535 aa23.33■■□□□ 1.33
SNRPA1-205ENST00000558036 CCDC73Q6ZRK6 1079 aa23.33■■□□□ 1.33
SNRPA1-205ENST00000558036 SCYL3Q8IZE3 742 aa23.33■■□□□ 1.33
SNRPA1-205ENST00000558036 REXO1Q8N1G1 1221 aaKnown RBP23.33■■□□□ 1.33
SNRPA1-205ENST00000558036 JMYQ8N9B5 988 aa23.33■■□□□ 1.33
SNRPA1-205ENST00000558036 KLRG1Q96E93 195 aa23.33■■□□□ 1.33
SNRPA1-205ENST00000558036 ESYT2A0FGR8 921 aa23.33■■□□□ 1.32
SNRPA1-205ENST00000558036 MTMR2Q13614 643 aa23.33■■□□□ 1.32
SNRPA1-205ENST00000558036 SUPT20HL1Q3ZLR7 823 aa23.33■■□□□ 1.32
SNRPA1-205ENST00000558036 USH1GQ495M9 461 aa23.33■■□□□ 1.32
SNRPA1-205ENST00000558036 SHC4Q6S5L8 630 aa23.33■■□□□ 1.32
SNRPA1-205ENST00000558036 KRT26Q7Z3Y9 468 aa23.33■■□□□ 1.32
SNRPA1-205ENST00000558036 FAM177A1Q8N128 213 aaPredicted RBP23.33■■□□□ 1.32
SNRPA1-205ENST00000558036 KIFC2Q96AC6 838 aa23.33■■□□□ 1.32
SNRPA1-205ENST00000558036 GOLGA6L3A6NEY3 463 aa23.32■■□□□ 1.32
SNRPA1-205ENST00000558036 UBE2SQ16763 222 aa23.32■■□□□ 1.32
SNRPA1-205ENST00000558036 KRI1Q8N9T8 703 aaKnown RBP23.32■■□□□ 1.32
SNRPA1-205ENST00000558036 ENGASEQ8NFI3 743 aa23.32■■□□□ 1.32
SNRPA1-205ENST00000558036 NUP62CLQ9H1M0 184 aa23.32■■□□□ 1.32
SNRPA1-205ENST00000558036 FBXO2Q9UK22 296 aaPredicted RBP23.32■■□□□ 1.32
SNRPA1-205ENST00000558036 CEP131Q9UPN4 1083 aa23.32■■□□□ 1.32
SNRPA1-205ENST00000558036 POLR2AP24928 1970 aaKnown RBP23.32■■□□□ 1.32
SNRPA1-205ENST00000558036 FAM160A1Q05DH4 1040 aa23.32■■□□□ 1.32
SNRPA1-205ENST00000558036 SPP2Q13103 211 aa23.32■■□□□ 1.32
SNRPA1-205ENST00000558036 PICK1Q9NRD5 415 aa23.32■■□□□ 1.32
SNRPA1-205ENST00000558036 FSD2A1L4K1 749 aa23.31■■□□□ 1.32
SNRPA1-205ENST00000558036 PTPRAP18433 802 aa23.31■■□□□ 1.32
SNRPA1-205ENST00000558036 TRAPPC10P48553 1259 aa23.31■■□□□ 1.32
SNRPA1-205ENST00000558036 EAPPQ56P03 285 aaPredicted RBP23.31■■□□□ 1.32
SNRPA1-205ENST00000558036 DDX19AQ9NUU7 478 aaKnown RBP23.31■■□□□ 1.32
SNRPA1-205ENST00000558036 CMA1P23946 247 aa23.3■■□□□ 1.32
SNRPA1-205ENST00000558036 PTGDRQ13258 359 aa23.3■■□□□ 1.32
SNRPA1-205ENST00000558036 PPP1R18Q6NYC8 613 aa23.3■■□□□ 1.32
SNRPA1-205ENST00000558036 LRSAM1Q6UWE0 723 aa23.3■■□□□ 1.32
SNRPA1-205ENST00000558036 KIAA1683Q9H0B3 1180 aa23.3■■□□□ 1.32
SNRPA1-205ENST00000558036 RIC8AQ9NPQ8 531 aa23.3■■□□□ 1.32
SNRPA1-205ENST00000558036 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.3■■□□□ 1.32
SNRPA1-205ENST00000558036 USP2O75604 605 aaPredicted RBP23.3■■□□□ 1.32
SNRPA1-205ENST00000558036 PFKFB1P16118 471 aa23.3■■□□□ 1.32
SNRPA1-205ENST00000558036 PTPREP23469 700 aa23.3■■□□□ 1.32
SNRPA1-205ENST00000558036 USP50Q70EL3 339 aaPredicted RBP23.3■■□□□ 1.32
SNRPA1-205ENST00000558036 CKAP2LQ8IYA6 745 aa23.3■■□□□ 1.32
SNRPA1-205ENST00000558036 FMR1NBQ8N0W7 255 aaPredicted RBP23.3■■□□□ 1.32
SNRPA1-205ENST00000558036 AMNQ9BXJ7 453 aa23.3■■□□□ 1.32
SNRPA1-205ENST00000558036 PSTPIP2Q9H939 334 aa23.3■■□□□ 1.32
SNRPA1-205ENST00000558036 GINM1Q9NU53 330 aa23.3■■□□□ 1.32
SNRPA1-205ENST00000558036 ZHX2Q9Y6X8 837 aa23.3■■□□□ 1.32
SNRPA1-205ENST00000558036 CUTAO60888 179 aa23.29■■□□□ 1.32
SNRPA1-205ENST00000558036 KRT25Q7Z3Z0 450 aa23.29■■□□□ 1.32
SNRPA1-205ENST00000558036 FBXO11Q86XK2 927 aa23.29■■□□□ 1.32
SNRPA1-205ENST00000558036 CUL5Q93034 780 aa23.29■■□□□ 1.32
SNRPA1-205ENST00000558036 TNMDQ9H2S6 317 aa23.29■■□□□ 1.32
SNRPA1-205ENST00000558036 CLSTN2Q9H4D0 955 aa23.29■■□□□ 1.32
SNRPA1-205ENST00000558036 POTECB2RU33 542 aa23.29■■□□□ 1.32
SNRPA1-205ENST00000558036 NONOQ15233 471 aaKnown RBP eCLIP23.29■■□□□ 1.32
SNRPA1-205ENST00000558036 CCDC174Q6PII3 467 aa23.29■■□□□ 1.32
SNRPA1-205ENST00000558036 EMILIN3Q9NT22 766 aa23.29■■□□□ 1.32
SNRPA1-205ENST00000558036 USP17L15C9J2P7 530 aa23.28■■□□□ 1.32
SNRPA1-205ENST00000558036 USP17L13C9JLJ4 530 aa23.28■■□□□ 1.32
SNRPA1-205ENST00000558036 USP17L11C9JVI0 530 aa23.28■■□□□ 1.32
SNRPA1-205ENST00000558036 USP17L18D6R9N7 530 aa23.28■■□□□ 1.32
SNRPA1-205ENST00000558036 USP17L22D6RA61 530 aa23.28■■□□□ 1.32
SNRPA1-205ENST00000558036 USP17L17D6RBQ6 530 aa23.28■■□□□ 1.32
SNRPA1-205ENST00000558036 USP17L19D6RCP7 530 aa23.28■■□□□ 1.32
SNRPA1-205ENST00000558036 USP17L20D6RJB6 530 aa23.28■■□□□ 1.32
SNRPA1-205ENST00000558036 USP17L24Q0WX57 530 aa23.28■■□□□ 1.32
SNRPA1-205ENST00000558036 USP17L6PQ6QN14 398 aa23.28■■□□□ 1.32
SNRPA1-205ENST00000558036 TBCKQ8TEA7 893 aa23.28■■□□□ 1.32
SNRPA1-205ENST00000558036 CHURC1Q8WUH1 139 aa23.28■■□□□ 1.32
SNRPA1-205ENST00000558036 TAF1DQ9H5J8 278 aaPredicted RBP23.28■■□□□ 1.32
SNRPA1-205ENST00000558036 SRPRBQ9Y5M8 271 aaKnown RBP23.28■■□□□ 1.32
SNRPA1-205ENST00000558036 KINO60870 393 aaKnown RBP23.27■■□□□ 1.32
SNRPA1-205ENST00000558036 LETM2Q2VYF4 491 aa23.27■■□□□ 1.32
SNRPA1-205ENST00000558036 RESP18Q5W5W9 173 aa23.27■■□□□ 1.32
SNRPA1-205ENST00000558036 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.27■■□□□ 1.32
SNRPA1-205ENST00000558036 CSRNP2Q9H175 543 aa23.27■■□□□ 1.32
SNRPA1-205ENST00000558036 ZC3H4Q9UPT8 1303 aaKnown RBP23.27■■□□□ 1.32
SNRPA1-205ENST00000558036 DOCK1Q14185 1865 aa23.27■■□□□ 1.32
SNRPA1-205ENST00000558036 ATP2C1P98194 919 aaPredicted RBP23.27■■□□□ 1.32
SNRPA1-205ENST00000558036 ZNF280CQ8ND82 737 aa23.27■■□□□ 1.32
SNRPA1-205ENST00000558036 FEM1BQ9UK73 627 aa23.27■■□□□ 1.32
SNRPA1-205ENST00000558036 VCAM1P19320 739 aa23.26■■□□□ 1.31
SNRPA1-205ENST00000558036 MRPL12P52815 198 aaKnown RBP23.26■■□□□ 1.31
SNRPA1-205ENST00000558036 USP49Q70CQ1 688 aa23.26■■□□□ 1.31
SNRPA1-205ENST00000558036 LPAR1Q92633 364 aa23.26■■□□□ 1.31
SNRPA1-205ENST00000558036 TANGO6Q9C0B7 1094 aa23.26■■□□□ 1.31
SNRPA1-205ENST00000558036 CLK2P49760 499 aaKnown RBP23.26■■□□□ 1.31
SNRPA1-205ENST00000558036 BACE1P56817 501 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms