RNA–Protein interactions for RNA: ENST00000557624.1

RIPK3-206, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 1 (best)

Gene RIPK3, Length 1,629 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-206ENST00000557624 QRICH1Q2TAL8 776 aa16.37■□□□□ 0.21
RIPK3-206ENST00000557624 REM2Q8IYK8 340 aaPredicted RBP16.37■□□□□ 0.21
RIPK3-206ENST00000557624 CPXCR1Q8N123 301 aa16.37■□□□□ 0.21
RIPK3-206ENST00000557624 RNF26Q9BY78 433 aaPredicted RBP16.37■□□□□ 0.21
RIPK3-206ENST00000557624 RANBP17Q9H2T7 1088 aaKnown RBP16.37■□□□□ 0.21
RIPK3-206ENST00000557624 SLC38A10Q9HBR0 1119 aa16.37■□□□□ 0.21
RIPK3-206ENST00000557624 ZCCHC17Q9NP64 241 aaKnown RBP16.37■□□□□ 0.21
RIPK3-206ENST00000557624 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.37■□□□□ 0.21
RIPK3-206ENST00000557624 THSD7BQ9C0I4 1608 aa16.37■□□□□ 0.21
RIPK3-206ENST00000557624 PRPF3O43395 683 aaKnown RBP16.37■□□□□ 0.21
RIPK3-206ENST00000557624 PLS1Q14651 629 aa16.37■□□□□ 0.21
RIPK3-206ENST00000557624 POTEEQ6S8J3 1075 aa16.37■□□□□ 0.21
RIPK3-206ENST00000557624 MTMR8Q96EF0 704 aa16.37■□□□□ 0.21
RIPK3-206ENST00000557624 RAVER2Q9HCJ3 691 aaKnown RBP16.37■□□□□ 0.21
RIPK3-206ENST00000557624 ORC3Q9UBD5 711 aaPredicted RBP16.37■□□□□ 0.21
RIPK3-206ENST00000557624 ADAMTS5Q9UNA0 930 aa16.37■□□□□ 0.21
RIPK3-206ENST00000557624 SMCHD1A6NHR9 2005 aa16.37■□□□□ 0.21
RIPK3-206ENST00000557624 A0A0G2JMZ2 1700 aa16.36■□□□□ 0.21
RIPK3-206ENST00000557624 PNMA6FA0A0J9YX94 578 aa16.36■□□□□ 0.21
RIPK3-206ENST00000557624 TAL1P17542 331 aaPredicted RBP16.36■□□□□ 0.21
RIPK3-206ENST00000557624 LBX2Q6XYB7 198 aa16.36■□□□□ 0.21
RIPK3-206ENST00000557624 HEATR3Q7Z4Q2 680 aa16.36■□□□□ 0.21
RIPK3-206ENST00000557624 MB21D1Q8N884 522 aa16.36■□□□□ 0.21
RIPK3-206ENST00000557624 TXNRD2Q9NNW7 524 aa16.36■□□□□ 0.21
RIPK3-206ENST00000557624 RBM27Q9P2N5 1060 aaKnown RBP16.36■□□□□ 0.21
RIPK3-206ENST00000557624 SMC3Q9UQE7 1217 aa16.36■□□□□ 0.21
RIPK3-206ENST00000557624 STK36Q9NRP7 1315 aa16.35■□□□□ 0.21
RIPK3-206ENST00000557624 PPP1R11O60927 126 aaPredicted RBP16.35■□□□□ 0.21
RIPK3-206ENST00000557624 DEXIO95424 95 aa16.35■□□□□ 0.21
RIPK3-206ENST00000557624 ALDH1A1P00352 501 aa16.35■□□□□ 0.21
RIPK3-206ENST00000557624 FDX1P10109 184 aa16.35■□□□□ 0.21
RIPK3-206ENST00000557624 HMGN5P82970 282 aaKnown RBP16.35■□□□□ 0.21
RIPK3-206ENST00000557624 CRHR2Q13324 411 aa16.35■□□□□ 0.21
RIPK3-206ENST00000557624 TMEM132BQ14DG7 1078 aa16.35■□□□□ 0.21
RIPK3-206ENST00000557624 USH1GQ495M9 461 aa16.35■□□□□ 0.21
RIPK3-206ENST00000557624 ANKRD13CQ8N6S4 541 aa16.35■□□□□ 0.21
RIPK3-206ENST00000557624 REPS2Q8NFH8 660 aa16.35■□□□□ 0.21
RIPK3-206ENST00000557624 SMARCC2Q8TAQ2 1214 aa16.35■□□□□ 0.21
RIPK3-206ENST00000557624 GPKOWQ92917 476 aaPredicted RBP eCLIP16.35■□□□□ 0.21
RIPK3-206ENST00000557624 AGBL1Q96MI9 1066 aa16.35■□□□□ 0.21
RIPK3-206ENST00000557624 AIFM3Q96NN9 605 aa16.35■□□□□ 0.21
RIPK3-206ENST00000557624 ZFYVE28Q9HCC9 887 aa16.35■□□□□ 0.21
RIPK3-206ENST00000557624 BTBD7Q9P203 1132 aa16.35■□□□□ 0.21
RIPK3-206ENST00000557624 CCPG1Q9ULG6 757 aa16.35■□□□□ 0.21
RIPK3-206ENST00000557624 ZNF536O15090 1300 aa16.35■□□□□ 0.21
RIPK3-206ENST00000557624 SCG2P13521 617 aa16.34■□□□□ 0.21
RIPK3-206ENST00000557624 FDPSP14324 419 aaKnown RBP16.34■□□□□ 0.21
RIPK3-206ENST00000557624 GCLCP48506 637 aaPredicted RBP16.34■□□□□ 0.21
RIPK3-206ENST00000557624 FOSBP53539 338 aa16.34■□□□□ 0.21
RIPK3-206ENST00000557624 PKN1Q16512 942 aa16.34■□□□□ 0.21
RIPK3-206ENST00000557624 PFKFB3Q16875 520 aaPredicted RBP16.34■□□□□ 0.21
RIPK3-206ENST00000557624 FBXO11Q86XK2 927 aa16.34■□□□□ 0.21
RIPK3-206ENST00000557624 FAM184AQ8NB25 1140 aa16.34■□□□□ 0.21
RIPK3-206ENST00000557624 GTF3C2Q8WUA4 911 aaPredicted RBP16.34■□□□□ 0.21
RIPK3-206ENST00000557624 INTS4Q96HW7 963 aaKnown RBP16.34■□□□□ 0.21
RIPK3-206ENST00000557624 AMNQ9BXJ7 453 aa16.34■□□□□ 0.21
RIPK3-206ENST00000557624 RBPJLQ9UBG7 517 aa16.34■□□□□ 0.21
RIPK3-206ENST00000557624 DAXXQ9UER7 740 aaPredicted RBP16.34■□□□□ 0.21
RIPK3-206ENST00000557624 CPA4Q9UI42 421 aa16.34■□□□□ 0.21
RIPK3-206ENST00000557624 ZNF214Q9UL59 606 aaPredicted RBP16.34■□□□□ 0.21
RIPK3-206ENST00000557624 RABGAP1Q9Y3P9 1069 aa16.34■□□□□ 0.21
RIPK3-206ENST00000557624 CEP350Q5VT06 3117 aa16.34■□□□□ 0.21
RIPK3-206ENST00000557624 CA12O43570 354 aa16.34■□□□□ 0.21
RIPK3-206ENST00000557624 CNMDO75829 334 aa16.34■□□□□ 0.21
RIPK3-206ENST00000557624 ICAM1P05362 532 aa16.34■□□□□ 0.21
RIPK3-206ENST00000557624 GJB2P29033 226 aa16.34■□□□□ 0.21
RIPK3-206ENST00000557624 WWC2Q6AWC2 1192 aa16.34■□□□□ 0.21
RIPK3-206ENST00000557624 SNRNP48Q6IEG0 339 aaKnown RBP16.34■□□□□ 0.21
RIPK3-206ENST00000557624 COA7Q96BR5 231 aa16.34■□□□□ 0.21
RIPK3-206ENST00000557624 TEX13BQ9BXU2 312 aa16.34■□□□□ 0.21
RIPK3-206ENST00000557624 HOMER2Q9NSB8 354 aa16.34■□□□□ 0.21
RIPK3-206ENST00000557624 PCDHA1Q9Y5I3 950 aa16.34■□□□□ 0.21
RIPK3-206ENST00000557624 PCNTO95613 3336 aa16.33■□□□□ 0.21
RIPK3-206ENST00000557624 ADGRA2Q96PE1 1338 aa16.33■□□□□ 0.2
RIPK3-206ENST00000557624 TLR2O60603 784 aa16.33■□□□□ 0.2
RIPK3-206ENST00000557624 TRPA1O75762 1119 aa16.33■□□□□ 0.2
RIPK3-206ENST00000557624 OAZ1P54368 228 aa16.33■□□□□ 0.2
RIPK3-206ENST00000557624 WASF1Q92558 559 aa16.33■□□□□ 0.2
RIPK3-206ENST00000557624 ALG1Q9BT22 464 aa16.33■□□□□ 0.2
RIPK3-206ENST00000557624 SPATC1LQ9H0A9 340 aa16.33■□□□□ 0.2
RIPK3-206ENST00000557624 RNF186Q9NXI6 227 aa16.33■□□□□ 0.2
RIPK3-206ENST00000557624 ALAS1P13196 640 aa16.32■□□□□ 0.2
RIPK3-206ENST00000557624 STAT3P40763 770 aa16.32■□□□□ 0.2
RIPK3-206ENST00000557624 ERVK-9P63128 1117 aa16.32■□□□□ 0.2
RIPK3-206ENST00000557624 ERVK-24P63145 666 aa16.32■□□□□ 0.2
RIPK3-206ENST00000557624 DNAJC5GQ8N7S2 189 aa16.32■□□□□ 0.2
RIPK3-206ENST00000557624 GPRC5AQ8NFJ5 357 aa16.32■□□□□ 0.2
RIPK3-206ENST00000557624 VPS54Q9P1Q0 977 aa16.32■□□□□ 0.2
RIPK3-206ENST00000557624 STXBP3O00186 592 aa16.31■□□□□ 0.2
RIPK3-206ENST00000557624 ATP2A1O14983 1001 aa16.31■□□□□ 0.2
RIPK3-206ENST00000557624 TBC1D8O95759 1140 aa16.31■□□□□ 0.2
RIPK3-206ENST00000557624 NAPAP54920 295 aa16.31■□□□□ 0.2
RIPK3-206ENST00000557624 FAM110CQ1W6H9 321 aa16.31■□□□□ 0.2
RIPK3-206ENST00000557624 Q3C1V9 767 aa16.31■□□□□ 0.2
RIPK3-206ENST00000557624 IPO9Q96P70 1041 aaKnown RBP16.31■□□□□ 0.2
RIPK3-206ENST00000557624 MOV10L1Q9BXT6 1211 aaKnown RBP16.31■□□□□ 0.2
RIPK3-206ENST00000557624 R3HDMLQ9H3Y0 253 aa16.31■□□□□ 0.2
RIPK3-206ENST00000557624 GJB4Q9NTQ9 266 aa16.31■□□□□ 0.2
RIPK3-206ENST00000557624 BARHL2Q9NY43 387 aa16.31■□□□□ 0.2
RIPK3-206ENST00000557624 KIF3AQ9Y496 699 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms