RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 FAM184BQ9ULE4 1060 aa7.15□□□□□ -1.26
ATXN3-245ENST00000556958 CNPY2Q9Y2B0 182 aa7.15□□□□□ -1.26
ATXN3-245ENST00000556958 PCDHB3Q9Y5E6 796 aa7.15□□□□□ -1.26
ATXN3-245ENST00000556958 SALL1Q9NSC2 1324 aa7.15□□□□□ -1.26
ATXN3-245ENST00000556958 LTBP2Q14767 1821 aa7.15□□□□□ -1.27
ATXN3-245ENST00000556958 TCF20Q9UGU0 1960 aaKnown RBP7.15□□□□□ -1.27
ATXN3-245ENST00000556958 ADAMTS4O75173 837 aa7.14□□□□□ -1.27
ATXN3-245ENST00000556958 FCER1AP12319 257 aa7.14□□□□□ -1.27
ATXN3-245ENST00000556958 BTDP43251 543 aa7.14□□□□□ -1.27
ATXN3-245ENST00000556958 CCL23P55773 120 aa7.14□□□□□ -1.27
ATXN3-245ENST00000556958 ZP2Q05996 745 aa7.14□□□□□ -1.27
ATXN3-245ENST00000556958 FLIIQ13045 1269 aa7.14□□□□□ -1.27
ATXN3-245ENST00000556958 MYO9BQ13459 2157 aa7.14□□□□□ -1.27
ATXN3-245ENST00000556958 PLA2G2CQ5R387 149 aa7.14□□□□□ -1.27
ATXN3-245ENST00000556958 MAST2Q6P0Q8 1798 aa7.14□□□□□ -1.27
ATXN3-245ENST00000556958 DGLUCYQ7Z3D6 616 aa7.14□□□□□ -1.27
ATXN3-245ENST00000556958 FOXP4Q8IVH2 680 aaPredicted RBP7.14□□□□□ -1.27
ATXN3-245ENST00000556958 FAM126BQ8IXS8 530 aa7.14□□□□□ -1.27
ATXN3-245ENST00000556958 FBXL6Q8N531 539 aa7.14□□□□□ -1.27
ATXN3-245ENST00000556958 KLHDC9Q8NEP7 349 aa7.14□□□□□ -1.27
ATXN3-245ENST00000556958 LPIN2Q92539 896 aa7.14□□□□□ -1.27
ATXN3-245ENST00000556958 C12orf42Q96LP6 360 aa7.14□□□□□ -1.27
ATXN3-245ENST00000556958 SLC9A7Q96T83 725 aa7.14□□□□□ -1.27
ATXN3-245ENST00000556958 FEZ1Q99689 392 aa7.14□□□□□ -1.27
ATXN3-245ENST00000556958 MOV10L1Q9BXT6 1211 aaKnown RBP7.14□□□□□ -1.27
ATXN3-245ENST00000556958 DHX36Q9H2U1 1008 aaKnown RBP7.14□□□□□ -1.27
ATXN3-245ENST00000556958 CDHR5Q9HBB8 845 aa7.14□□□□□ -1.27
ATXN3-245ENST00000556958 C9orf78Q9NZ63 289 aaPredicted RBP7.14□□□□□ -1.27
ATXN3-245ENST00000556958 CTNNA3Q9UI47 895 aa7.14□□□□□ -1.27
ATXN3-245ENST00000556958 DOCK3Q8IZD9 2030 aa7.13□□□□□ -1.27
ATXN3-245ENST00000556958 GPR75-ASB3A0A0A6YYF3 556 aa7.13□□□□□ -1.27
ATXN3-245ENST00000556958 TMEM221A6NGB7 291 aa7.13□□□□□ -1.27
ATXN3-245ENST00000556958 M0R296 226 aa7.13□□□□□ -1.27
ATXN3-245ENST00000556958 GRM8O00222 908 aa7.13□□□□□ -1.27
ATXN3-245ENST00000556958 AXIN1O15169 862 aa7.13□□□□□ -1.27
ATXN3-245ENST00000556958 GPR37O15354 613 aa7.13□□□□□ -1.27
ATXN3-245ENST00000556958 LPXNO60711 386 aa7.13□□□□□ -1.27
ATXN3-245ENST00000556958 CD4P01730 458 aa7.13□□□□□ -1.27
ATXN3-245ENST00000556958 LDHCP07864 332 aa7.13□□□□□ -1.27
ATXN3-245ENST00000556958 ERCC3P19447 782 aa7.13□□□□□ -1.27
ATXN3-245ENST00000556958 FGFR2P21802 821 aa7.13□□□□□ -1.27
ATXN3-245ENST00000556958 CST5P28325 142 aaPredicted RBP7.13□□□□□ -1.27
ATXN3-245ENST00000556958 PTGDRQ13258 359 aa7.13□□□□□ -1.27
ATXN3-245ENST00000556958 HIC1Q14526 733 aa7.13□□□□□ -1.27
ATXN3-245ENST00000556958 RRP1BQ14684 758 aaKnown RBP7.13□□□□□ -1.27
ATXN3-245ENST00000556958 CCSAPQ6IQ19 270 aaPredicted RBP7.13□□□□□ -1.27
ATXN3-245ENST00000556958 ASCL5Q7RTU5 278 aa7.13□□□□□ -1.27
ATXN3-245ENST00000556958 MB21D1Q8N884 522 aa7.13□□□□□ -1.27
ATXN3-245ENST00000556958 NEK9Q8TD19 979 aa7.13□□□□□ -1.27
ATXN3-245ENST00000556958 TINF2Q9BSI4 451 aa7.13□□□□□ -1.27
ATXN3-245ENST00000556958 DIS3Q9Y2L1 958 aaKnown RBP7.13□□□□□ -1.27
ATXN3-245ENST00000556958 ATRXP46100 2492 aa7.12□□□□□ -1.27
ATXN3-245ENST00000556958 RIF1Q5UIP0 2472 aaKnown RBP7.12□□□□□ -1.27
ATXN3-245ENST00000556958 PRRC2BQ5JSZ5 2229 aaKnown RBP7.12□□□□□ -1.27
ATXN3-245ENST00000556958 A0A1B0GUL7 405 aa7.12□□□□□ -1.27
ATXN3-245ENST00000556958 MED19A0JLT2 244 aaPredicted RBP7.12□□□□□ -1.27
ATXN3-245ENST00000556958 TERTO14746 1132 aaKnown RBP7.12□□□□□ -1.27
ATXN3-245ENST00000556958 DUSP11O75319 330 aaKnown RBP7.12□□□□□ -1.27
ATXN3-245ENST00000556958 CABYRO75952 493 aa7.12□□□□□ -1.27
ATXN3-245ENST00000556958 ASGR1P07306 291 aa7.12□□□□□ -1.27
ATXN3-245ENST00000556958 C6orf222P0C671 652 aaPredicted RBP7.12□□□□□ -1.27
ATXN3-245ENST00000556958 ZNF865P0CJ78 1059 aaPredicted RBP7.12□□□□□ -1.27
ATXN3-245ENST00000556958 IRS1P35568 1242 aa7.12□□□□□ -1.27
ATXN3-245ENST00000556958 COG2Q14746 738 aa7.12□□□□□ -1.27
ATXN3-245ENST00000556958 LRRC24Q50LG9 513 aa7.12□□□□□ -1.27
ATXN3-245ENST00000556958 GNASQ5JWF2 1037 aa7.12□□□□□ -1.27
ATXN3-245ENST00000556958 BEND3Q5T5X7 828 aa7.12□□□□□ -1.27
ATXN3-245ENST00000556958 ATF7IPQ6VMQ6 1270 aa7.12□□□□□ -1.27
ATXN3-245ENST00000556958 G2E3Q7L622 706 aa7.12□□□□□ -1.27
ATXN3-245ENST00000556958 NCAPG2Q86XI2 1143 aa7.12□□□□□ -1.27
ATXN3-245ENST00000556958 HERC6Q8IVU3 1022 aa7.12□□□□□ -1.27
ATXN3-245ENST00000556958 CCDC146Q8IYE0 955 aa7.12□□□□□ -1.27
ATXN3-245ENST00000556958 CRACR2BQ8N4Y2 399 aaPredicted RBP7.12□□□□□ -1.27
ATXN3-245ENST00000556958 VGLL2Q8N8G2 317 aa7.12□□□□□ -1.27
ATXN3-245ENST00000556958 CNTNAP3BQ96NU0 1288 aa7.12□□□□□ -1.27
ATXN3-245ENST00000556958 FSD1Q9BTV5 496 aa7.12□□□□□ -1.27
ATXN3-245ENST00000556958 CNTNAP3Q9BZ76 1288 aa7.12□□□□□ -1.27
ATXN3-245ENST00000556958 SPATC1LQ9H0A9 340 aa7.12□□□□□ -1.27
ATXN3-245ENST00000556958 MUTYHQ9UIF7 546 aa7.12□□□□□ -1.27
ATXN3-245ENST00000556958 CHD7Q9P2D1 2997 aa7.12□□□□□ -1.27
ATXN3-245ENST00000556958 CACNA1HO95180 2353 aa7.12□□□□□ -1.27
ATXN3-245ENST00000556958 WDFY4Q6ZS81 3184 aa7.12□□□□□ -1.27
ATXN3-245ENST00000556958 RFX7Q2KHR2 1363 aa7.11□□□□□ -1.27
ATXN3-245ENST00000556958 SYNRGQ9UMZ2 1314 aa7.11□□□□□ -1.27
ATXN3-245ENST00000556958 USP34Q70CQ2 3546 aa7.11□□□□□ -1.27
ATXN3-245ENST00000556958 PRR23AA6NEV1 266 aa7.11□□□□□ -1.27
ATXN3-245ENST00000556958 H0Y858 1186 aa7.11□□□□□ -1.27
ATXN3-245ENST00000556958 NCK2O43639 380 aa7.11□□□□□ -1.27
ATXN3-245ENST00000556958 SLC25A27O95847 323 aa7.11□□□□□ -1.27
ATXN3-245ENST00000556958 FECHP22830 423 aa7.11□□□□□ -1.27
ATXN3-245ENST00000556958 AVPR2P30518 371 aa7.11□□□□□ -1.27
ATXN3-245ENST00000556958 RHBDL3P58872 404 aa7.11□□□□□ -1.27
ATXN3-245ENST00000556958 GSTO1P78417 241 aa7.11□□□□□ -1.27
ATXN3-245ENST00000556958 FOXC1Q12948 553 aa7.11□□□□□ -1.27
ATXN3-245ENST00000556958 PLS1Q14651 629 aa7.11□□□□□ -1.27
ATXN3-245ENST00000556958 TTLL4Q14679 1199 aa7.11□□□□□ -1.27
ATXN3-245ENST00000556958 ZYXQ15942 572 aaKnown RBP7.11□□□□□ -1.27
ATXN3-245ENST00000556958 PTPROQ16827 1216 aa7.11□□□□□ -1.27
ATXN3-245ENST00000556958 RNF135Q8IUD6 432 aa7.11□□□□□ -1.27
ATXN3-245ENST00000556958 MSL3Q8N5Y2 521 aaKnown RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms