RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 NMIQ13287 307 aaPredicted RBP26.73■■□□□ 1.87
ACTN1-220ENST00000556433 C1orf53Q5VUE5 145 aa26.73■■□□□ 1.87
ACTN1-220ENST00000556433 AGBL1Q96MI9 1066 aa26.73■■□□□ 1.87
ACTN1-220ENST00000556433 CDKN2AIPQ9NXV6 580 aaPredicted RBP26.73■■□□□ 1.87
ACTN1-220ENST00000556433 MTMR7Q9Y216 660 aa26.73■■□□□ 1.87
ACTN1-220ENST00000556433 HSPD1P10809 573 aaKnown RBP26.72■■□□□ 1.87
ACTN1-220ENST00000556433 TLE2Q04725 743 aa26.72■■□□□ 1.87
ACTN1-220ENST00000556433 ACVR2BQ13705 512 aa26.72■■□□□ 1.87
ACTN1-220ENST00000556433 RRP12Q5JTH9 1297 aaKnown RBP26.72■■□□□ 1.87
ACTN1-220ENST00000556433 ACAD9Q9H845 621 aa26.72■■□□□ 1.87
ACTN1-220ENST00000556433 ZNF536O15090 1300 aa26.71■■□□□ 1.87
ACTN1-220ENST00000556433 ADAMTS4O75173 837 aa26.71■■□□□ 1.87
ACTN1-220ENST00000556433 NOVP48745 357 aa26.71■■□□□ 1.87
ACTN1-220ENST00000556433 SNAP25P60880 206 aa26.71■■□□□ 1.87
ACTN1-220ENST00000556433 CCDC174Q6PII3 467 aa26.71■■□□□ 1.87
ACTN1-220ENST00000556433 ZNF589Q86UQ0 364 aaPredicted RBP26.71■■□□□ 1.87
ACTN1-220ENST00000556433 FGD4Q96M96 766 aa26.71■■□□□ 1.87
ACTN1-220ENST00000556433 RNF146Q9NTX7 359 aa26.71■■□□□ 1.87
ACTN1-220ENST00000556433 PRR12Q9ULL5 1215 aa26.71■■□□□ 1.87
ACTN1-220ENST00000556433 LAMA3Q16787 3333 aa26.7■■□□□ 1.87
ACTN1-220ENST00000556433 POTEB2H3BUK9 544 aa26.7■■□□□ 1.86
ACTN1-220ENST00000556433 IGHDP01880 384 aa26.7■■□□□ 1.86
ACTN1-220ENST00000556433 CNTN2Q02246 1040 aa26.7■■□□□ 1.86
ACTN1-220ENST00000556433 TKFCQ3LXA3 575 aa26.7■■□□□ 1.86
ACTN1-220ENST00000556433 CHD1LQ86WJ1 897 aa26.7■■□□□ 1.86
ACTN1-220ENST00000556433 DEFB123Q8N688 67 aa26.7■■□□□ 1.86
ACTN1-220ENST00000556433 TRERF1Q96PN7 1200 aa26.7■■□□□ 1.86
ACTN1-220ENST00000556433 TSEN34Q9BSV6 310 aaKnown RBP26.7■■□□□ 1.86
ACTN1-220ENST00000556433 ABHD16BQ9H3Z7 469 aa26.7■■□□□ 1.86
ACTN1-220ENST00000556433 PDLIM7Q9NR12 457 aa26.7■■□□□ 1.86
ACTN1-220ENST00000556433 SYNRGQ9UMZ2 1314 aa26.69■■□□□ 1.86
ACTN1-220ENST00000556433 A0A1W2PQ45 241 aaPredicted RBP26.69■■□□□ 1.86
ACTN1-220ENST00000556433 A0A1W2PQY0 241 aa26.69■■□□□ 1.86
ACTN1-220ENST00000556433 DUSP11O75319 330 aaKnown RBP26.69■■□□□ 1.86
ACTN1-220ENST00000556433 ALAS1P13196 640 aa26.69■■□□□ 1.86
ACTN1-220ENST00000556433 CCDC96Q2M329 555 aa26.69■■□□□ 1.86
ACTN1-220ENST00000556433 ARMCX2Q7L311 632 aa26.69■■□□□ 1.86
ACTN1-220ENST00000556433 RASGRP2Q7LDG7 609 aa26.69■■□□□ 1.86
ACTN1-220ENST00000556433 SH3RF1Q7Z6J0 888 aa26.69■■□□□ 1.86
ACTN1-220ENST00000556433 KLHDC9Q8NEP7 349 aa26.69■■□□□ 1.86
ACTN1-220ENST00000556433 BADQ92934 168 aa26.69■■□□□ 1.86
ACTN1-220ENST00000556433 CCDC171Q6TFL3 1326 aa26.68■■□□□ 1.86
ACTN1-220ENST00000556433 TRIM43BA6NCK2 446 aa26.68■■□□□ 1.86
ACTN1-220ENST00000556433 ACLYP53396 1101 aa26.68■■□□□ 1.86
ACTN1-220ENST00000556433 HAND2P61296 217 aa26.68■■□□□ 1.86
ACTN1-220ENST00000556433 CCDC144BQ3MJ40 725 aa26.68■■□□□ 1.86
ACTN1-220ENST00000556433 Q7L0L9 218 aa26.68■■□□□ 1.86
ACTN1-220ENST00000556433 PLEKHM2Q8IWE5 1019 aa26.68■■□□□ 1.86
ACTN1-220ENST00000556433 CCDC144CPQ8IYA2 1237 aa26.68■■□□□ 1.86
ACTN1-220ENST00000556433 FAM133AQ8N9E0 248 aa26.68■■□□□ 1.86
ACTN1-220ENST00000556433 EXOC6Q8TAG9 804 aa26.68■■□□□ 1.86
ACTN1-220ENST00000556433 DCAF4Q8WV16 495 aa26.68■■□□□ 1.86
ACTN1-220ENST00000556433 TRIM43Q96BQ3 446 aaPredicted RBP26.68■■□□□ 1.86
ACTN1-220ENST00000556433 A1CFQ9NQ94 594 aaKnown RBP26.68■■□□□ 1.86
ACTN1-220ENST00000556433 DNAH12Q6ZR08 3092 aa26.68■■□□□ 1.86
ACTN1-220ENST00000556433 TOP1P11387 765 aaKnown RBP26.67■■□□□ 1.86
ACTN1-220ENST00000556433 SDSP20132 328 aa26.67■■□□□ 1.86
ACTN1-220ENST00000556433 NUCB1Q02818 461 aa26.67■■□□□ 1.86
ACTN1-220ENST00000556433 KCNA10Q16322 511 aa26.67■■□□□ 1.86
ACTN1-220ENST00000556433 TMEM47Q9BQJ4 181 aa26.67■■□□□ 1.86
ACTN1-220ENST00000556433 TCP11L1Q9NUJ3 509 aa26.67■■□□□ 1.86
ACTN1-220ENST00000556433 MOXD2PA6NHM9 499 aa26.66■■□□□ 1.86
ACTN1-220ENST00000556433 TTBK2Q6IQ55 1244 aa26.66■■□□□ 1.86
ACTN1-220ENST00000556433 NUP133Q8WUM0 1156 aa26.66■■□□□ 1.86
ACTN1-220ENST00000556433 SPC25Q9HBM1 224 aa26.66■■□□□ 1.86
ACTN1-220ENST00000556433 STARD7Q9NQZ5 370 aa26.66■■□□□ 1.86
ACTN1-220ENST00000556433 ZMYM6O95789 1325 aa26.65■■□□□ 1.86
ACTN1-220ENST00000556433 MYADML2A6NDP7 307 aa26.65■■□□□ 1.86
ACTN1-220ENST00000556433 SOWAHBA6NEL2 793 aa26.65■■□□□ 1.86
ACTN1-220ENST00000556433 PQBP1O60828 265 aaKnown RBP26.65■■□□□ 1.86
ACTN1-220ENST00000556433 CLTBP09497 229 aa26.65■■□□□ 1.86
ACTN1-220ENST00000556433 C6orf222P0C671 652 aaPredicted RBP26.65■■□□□ 1.86
ACTN1-220ENST00000556433 MFAP1P55081 439 aaKnown RBP26.65■■□□□ 1.86
ACTN1-220ENST00000556433 CCSAPQ6IQ19 270 aaPredicted RBP26.65■■□□□ 1.86
ACTN1-220ENST00000556433 MFSD6Q6ZSS7 791 aa26.65■■□□□ 1.86
ACTN1-220ENST00000556433 OSBPL3Q9H4L5 887 aa26.65■■□□□ 1.86
ACTN1-220ENST00000556433 CCPG1Q9ULG6 757 aa26.65■■□□□ 1.86
ACTN1-220ENST00000556433 ASB14A6NK59 587 aa26.64■■□□□ 1.86
ACTN1-220ENST00000556433 ADCY6O43306 1168 aa26.64■■□□□ 1.86
ACTN1-220ENST00000556433 SLC16A2P36021 539 aa26.64■■□□□ 1.86
ACTN1-220ENST00000556433 IRX5P78411 483 aaPredicted RBP26.64■■□□□ 1.86
ACTN1-220ENST00000556433 SHHQ15465 462 aa26.64■■□□□ 1.86
ACTN1-220ENST00000556433 MUM1L1Q5H9M0 696 aa26.64■■□□□ 1.86
ACTN1-220ENST00000556433 AKNAD1Q5T1N1 836 aa26.64■■□□□ 1.86
ACTN1-220ENST00000556433 KATNBL1Q9H079 304 aa26.64■■□□□ 1.86
ACTN1-220ENST00000556433 CST5P28325 142 aaPredicted RBP26.63■■□□□ 1.85
ACTN1-220ENST00000556433 GJA9P57773 515 aa26.63■■□□□ 1.85
ACTN1-220ENST00000556433 BTNL9Q6UXG8 535 aa26.63■■□□□ 1.85
ACTN1-220ENST00000556433 PCSK9Q8NBP7 692 aaKnown RBP26.63■■□□□ 1.85
ACTN1-220ENST00000556433 GPCPD1Q9NPB8 672 aa26.63■■□□□ 1.85
ACTN1-220ENST00000556433 MTMR10Q9NXD2 777 aa26.63■■□□□ 1.85
ACTN1-220ENST00000556433 FRMPD2Q68DX3 1309 aaPredicted RBP26.63■■□□□ 1.85
ACTN1-220ENST00000556433 ICAM1P05362 532 aa26.62■■□□□ 1.85
ACTN1-220ENST00000556433 PCP11498 1178 aaKnown RBP26.62■■□□□ 1.85
ACTN1-220ENST00000556433 GNASQ5JWF2 1037 aa26.62■■□□□ 1.85
ACTN1-220ENST00000556433 SYDE2Q5VT97 1194 aa26.62■■□□□ 1.85
ACTN1-220ENST00000556433 GLT1D1Q96MS3 346 aa26.62■■□□□ 1.85
ACTN1-220ENST00000556433 TTC14Q96N46 770 aa26.62■■□□□ 1.85
ACTN1-220ENST00000556433 UPF3AQ9H1J1 476 aaKnown RBP26.62■■□□□ 1.85
ACTN1-220ENST00000556433 RANBP17Q9H2T7 1088 aaKnown RBP26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms