RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 CSADQ9Y600 493 aa5.65□□□□□ -1.5
ATXN3-241ENST00000556374 AK5Q9Y6K8 562 aa5.65□□□□□ -1.5
ATXN3-241ENST00000556374 ABCA3Q99758 1704 aa5.65□□□□□ -1.51
ATXN3-241ENST00000556374 IFT172Q9UG01 1749 aa5.65□□□□□ -1.51
ATXN3-241ENST00000556374 DISP2A7MBM2 1401 aa5.65□□□□□ -1.51
ATXN3-241ENST00000556374 RIMS2Q9UQ26 1411 aa5.65□□□□□ -1.51
ATXN3-241ENST00000556374 GFRA2O00451 464 aa5.64□□□□□ -1.51
ATXN3-241ENST00000556374 PPM1GO15355 546 aaPredicted RBP5.64□□□□□ -1.51
ATXN3-241ENST00000556374 CELA3AP09093 270 aa5.64□□□□□ -1.51
ATXN3-241ENST00000556374 C1QTNF8P60827 252 aa5.64□□□□□ -1.51
ATXN3-241ENST00000556374 MESP2Q0VG99 397 aa5.64□□□□□ -1.51
ATXN3-241ENST00000556374 INPP5AQ14642 412 aa5.64□□□□□ -1.51
ATXN3-241ENST00000556374 R3HDM1Q15032 1099 aaKnown RBP5.64□□□□□ -1.51
ATXN3-241ENST00000556374 KCNMB1Q16558 191 aa5.64□□□□□ -1.51
ATXN3-241ENST00000556374 SLC6A19Q695T7 634 aa5.64□□□□□ -1.51
ATXN3-241ENST00000556374 AGMOQ6ZNB7 445 aa5.64□□□□□ -1.51
ATXN3-241ENST00000556374 CCDC84Q86UT8 332 aaPredicted RBP5.64□□□□□ -1.51
ATXN3-241ENST00000556374 MRPL41Q8IXM3 137 aaKnown RBP5.64□□□□□ -1.51
ATXN3-241ENST00000556374 EXOC6Q8TAG9 804 aa5.64□□□□□ -1.51
ATXN3-241ENST00000556374 DDX17Q92841 729 aaKnown RBP5.64□□□□□ -1.51
ATXN3-241ENST00000556374 PLPPR2Q96GM1 343 aa5.64□□□□□ -1.51
ATXN3-241ENST00000556374 PANK3Q9H999 370 aa5.64□□□□□ -1.51
ATXN3-241ENST00000556374 ADAM30Q9UKF2 790 aa5.64□□□□□ -1.51
ATXN3-241ENST00000556374 TTF2Q9UNY4 1162 aaKnown RBP5.64□□□□□ -1.51
ATXN3-241ENST00000556374 VIRMAQ69YN4 1812 aaKnown RBP5.64□□□□□ -1.51
ATXN3-241ENST00000556374 PTPRUQ92729 1446 aa5.64□□□□□ -1.51
ATXN3-241ENST00000556374 SLIT2O94813 1529 aa5.64□□□□□ -1.51
ATXN3-241ENST00000556374 NRKQ7Z2Y5 1582 aa5.63□□□□□ -1.51
ATXN3-241ENST00000556374 NRAPQ86VF7 1730 aa5.63□□□□□ -1.51
ATXN3-241ENST00000556374 FAM155AB1AL88 458 aaPredicted RBP5.63□□□□□ -1.51
ATXN3-241ENST00000556374 P4HBP07237 508 aaKnown RBP5.63□□□□□ -1.51
ATXN3-241ENST00000556374 GLI1P08151 1106 aa5.63□□□□□ -1.51
ATXN3-241ENST00000556374 LMNB1P20700 586 aa5.63□□□□□ -1.51
ATXN3-241ENST00000556374 CD96P40200 585 aa5.63□□□□□ -1.51
ATXN3-241ENST00000556374 ST13P50502 369 aaKnown RBP5.63□□□□□ -1.51
ATXN3-241ENST00000556374 PDE4BQ07343 736 aa5.63□□□□□ -1.51
ATXN3-241ENST00000556374 IDI1Q13907 227 aa5.63□□□□□ -1.51
ATXN3-241ENST00000556374 RASIP1Q5U651 963 aa5.63□□□□□ -1.51
ATXN3-241ENST00000556374 CENPQQ7L2Z9 268 aaPredicted RBP5.63□□□□□ -1.51
ATXN3-241ENST00000556374 TMPRSS7Q7RTY8 843 aa5.63□□□□□ -1.51
ATXN3-241ENST00000556374 NOC4LQ9BVI4 516 aaKnown RBP5.63□□□□□ -1.51
ATXN3-241ENST00000556374 WWC3Q9ULE0 1092 aa5.63□□□□□ -1.51
ATXN3-241ENST00000556374 TPX2Q9ULW0 747 aaKnown RBP5.63□□□□□ -1.51
ATXN3-241ENST00000556374 ST14Q9Y5Y6 855 aa5.63□□□□□ -1.51
ATXN3-241ENST00000556374 CAPN6Q9Y6Q1 641 aa5.63□□□□□ -1.51
ATXN3-241ENST00000556374 NPC1L1Q9UHC9 1359 aa5.63□□□□□ -1.51
ATXN3-241ENST00000556374 QRICH2Q9H0J4 1663 aa5.63□□□□□ -1.51
ATXN3-241ENST00000556374 PRAMEF27A3QJZ7 478 aa5.62□□□□□ -1.51
ATXN3-241ENST00000556374 CANXP27824 592 aaKnown RBP5.62□□□□□ -1.51
ATXN3-241ENST00000556374 ETF1P62495 437 aaKnown RBP5.62□□□□□ -1.51
ATXN3-241ENST00000556374 ZNF124Q15973 351 aa5.62□□□□□ -1.51
ATXN3-241ENST00000556374 ZNF648Q5T619 568 aaPredicted RBP5.62□□□□□ -1.51
ATXN3-241ENST00000556374 LETMD1Q6P1Q0 360 aa5.62□□□□□ -1.51
ATXN3-241ENST00000556374 UBE3DQ7Z6J8 389 aa5.62□□□□□ -1.51
ATXN3-241ENST00000556374 NGEFQ8N5V2 710 aa5.62□□□□□ -1.51
ATXN3-241ENST00000556374 CRBNQ96SW2 442 aa5.62□□□□□ -1.51
ATXN3-241ENST00000556374 USP35Q9P2H5 1018 aa5.62□□□□□ -1.51
ATXN3-241ENST00000556374 C1orf167Q5SNV9 1468 aa5.62□□□□□ -1.51
ATXN3-241ENST00000556374 CASZ1Q86V15 1759 aa5.62□□□□□ -1.51
ATXN3-241ENST00000556374 LRRC10BA6NIK2 292 aa5.61□□□□□ -1.51
ATXN3-241ENST00000556374 FBXO24O75426 580 aa5.61□□□□□ -1.51
ATXN3-241ENST00000556374 TSPAN15O95858 294 aa5.61□□□□□ -1.51
ATXN3-241ENST00000556374 ETV3P41162 512 aa5.61□□□□□ -1.51
ATXN3-241ENST00000556374 CCDC85BQ15834 202 aaPredicted RBP5.61□□□□□ -1.51
ATXN3-241ENST00000556374 TSNAXIP1Q2TAA8 658 aa5.61□□□□□ -1.51
ATXN3-241ENST00000556374 WIPI1Q5MNZ9 446 aaPredicted RBP5.61□□□□□ -1.51
ATXN3-241ENST00000556374 PXDNQ92626 1479 aa5.61□□□□□ -1.51
ATXN3-241ENST00000556374 HSPA12BQ96MM6 686 aa5.61□□□□□ -1.51
ATXN3-241ENST00000556374 TESK2Q96S53 571 aa5.61□□□□□ -1.51
ATXN3-241ENST00000556374 MIPEPQ99797 713 aa5.61□□□□□ -1.51
ATXN3-241ENST00000556374 FBRSQ9HAH7 460 aa5.61□□□□□ -1.51
ATXN3-241ENST00000556374 THSD7AQ9UPZ6 1657 aa5.61□□□□□ -1.51
ATXN3-241ENST00000556374 TBX22Q9Y458 520 aa5.61□□□□□ -1.51
ATXN3-241ENST00000556374 ZNF503-AS2A6NEH8 195 aa5.6□□□□□ -1.51
ATXN3-241ENST00000556374 PPP2R1AP30153 589 aa5.6□□□□□ -1.51
ATXN3-241ENST00000556374 RPL6Q02878 288 aaKnown RBP5.6□□□□□ -1.51
ATXN3-241ENST00000556374 PTPN11Q06124 597 aaPredicted RBP5.6□□□□□ -1.51
ATXN3-241ENST00000556374 MCATQ8IVS2 390 aaKnown RBP5.6□□□□□ -1.51
ATXN3-241ENST00000556374 KIRREL1Q96J84 757 aa5.6□□□□□ -1.51
ATXN3-241ENST00000556374 SETDB2Q96T68 719 aa5.6□□□□□ -1.51
ATXN3-241ENST00000556374 BACH2Q9BYV9 841 aa5.6□□□□□ -1.51
ATXN3-241ENST00000556374 MIR1-1HGQ9H1L0 117 aa5.6□□□□□ -1.51
ATXN3-241ENST00000556374 CEP350Q5VT06 3117 aa5.6□□□□□ -1.51
ATXN3-241ENST00000556374 E9PSI1 815 aa5.59□□□□□ -1.51
ATXN3-241ENST00000556374 GRK4P32298 578 aa5.59□□□□□ -1.51
ATXN3-241ENST00000556374 LIG3P49916 1009 aa5.59□□□□□ -1.51
ATXN3-241ENST00000556374 NKG7Q16617 165 aa5.59□□□□□ -1.51
ATXN3-241ENST00000556374 FBLN7Q53RD9 439 aa5.59□□□□□ -1.51
ATXN3-241ENST00000556374 EAPPQ56P03 285 aaPredicted RBP5.59□□□□□ -1.51
ATXN3-241ENST00000556374 TMEM67Q5HYA8 995 aa5.59□□□□□ -1.51
ATXN3-241ENST00000556374 KRT27Q7Z3Y8 459 aa5.59□□□□□ -1.51
ATXN3-241ENST00000556374 SIAH1Q8IUQ4 282 aa5.59□□□□□ -1.51
ATXN3-241ENST00000556374 TOX2Q96NM4 488 aa5.59□□□□□ -1.51
ATXN3-241ENST00000556374 ALPK1Q96QP1 1244 aa5.59□□□□□ -1.51
ATXN3-241ENST00000556374 TRIT1Q9H3H1 467 aaKnown RBP5.59□□□□□ -1.51
ATXN3-241ENST00000556374 CARS2Q9HA77 564 aaKnown RBP5.59□□□□□ -1.51
ATXN3-241ENST00000556374 RGPD3A6NKT7 1758 aaPredicted RBP5.59□□□□□ -1.51
ATXN3-241ENST00000556374 PPLO60437 1756 aa5.59□□□□□ -1.51
ATXN3-241ENST00000556374 RGPD4Q7Z3J3 1758 aa5.59□□□□□ -1.51
ATXN3-241ENST00000556374 SHANK3Q9BYB0 1731 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms