RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 ETV3P41162 512 aa5.57□□□□□ -1.52
ATXN3-240ENST00000556339 CREG2Q8IUH2 290 aa5.57□□□□□ -1.52
ATXN3-240ENST00000556339 UNC5CLQ8IV45 518 aa5.57□□□□□ -1.52
ATXN3-240ENST00000556339 NGDNQ8NEJ9 315 aaKnown RBP5.57□□□□□ -1.52
ATXN3-240ENST00000556339 MYLIPQ8WY64 445 aa5.57□□□□□ -1.52
ATXN3-240ENST00000556339 GAL3ST3Q96A11 431 aa5.57□□□□□ -1.52
ATXN3-240ENST00000556339 SYTL4Q96C24 671 aaPredicted RBP5.57□□□□□ -1.52
ATXN3-240ENST00000556339 DPH2Q9BQC3 489 aaPredicted RBP5.57□□□□□ -1.52
ATXN3-240ENST00000556339 HIRIP3Q9BW71 556 aaPredicted RBP5.57□□□□□ -1.52
ATXN3-240ENST00000556339 KRTAP4-9Q9BYQ8 210 aa5.57□□□□□ -1.52
ATXN3-240ENST00000556339 TMEM59LQ9UK28 342 aa5.57□□□□□ -1.52
ATXN3-240ENST00000556339 PPLO60437 1756 aa5.57□□□□□ -1.52
ATXN3-240ENST00000556339 PTCH1Q13635 1447 aa5.57□□□□□ -1.52
ATXN3-240ENST00000556339 SPATA31A3Q5VYP0 1347 aa5.56□□□□□ -1.52
ATXN3-240ENST00000556339 LDHBP07195 334 aaKnown RBP5.56□□□□□ -1.52
ATXN3-240ENST00000556339 CDK8P49336 464 aa5.56□□□□□ -1.52
ATXN3-240ENST00000556339 PDE4BQ07343 736 aa5.56□□□□□ -1.52
ATXN3-240ENST00000556339 TNK2Q07912 1038 aa5.56□□□□□ -1.52
ATXN3-240ENST00000556339 SEPT6Q14141 434 aa5.56□□□□□ -1.52
ATXN3-240ENST00000556339 MAP3K11Q16584 847 aa5.56□□□□□ -1.52
ATXN3-240ENST00000556339 CIAPIN1Q6FI81 312 aa5.56□□□□□ -1.52
ATXN3-240ENST00000556339 TMPRSS7Q7RTY8 843 aa5.56□□□□□ -1.52
ATXN3-240ENST00000556339 NALCNQ8IZF0 1738 aa5.56□□□□□ -1.52
ATXN3-240ENST00000556339 YTHDC2Q9H6S0 1430 aaKnown RBP5.56□□□□□ -1.52
ATXN3-240ENST00000556339 NHSL1Q5SYE7 1610 aa5.56□□□□□ -1.52
ATXN3-240ENST00000556339 GPRASP1Q5JY77 1395 aa5.55□□□□□ -1.52
ATXN3-240ENST00000556339 PLEKHH1Q9ULM0 1364 aa5.55□□□□□ -1.52
ATXN3-240ENST00000556339 DNAJC25-GNG10A0A024R161 153 aa5.55□□□□□ -1.52
ATXN3-240ENST00000556339 RALGPS1Q5JS13 557 aa5.55□□□□□ -1.52
ATXN3-240ENST00000556339 ATG14Q6ZNE5 492 aa5.55□□□□□ -1.52
ATXN3-240ENST00000556339 LCNL1Q6ZST4 164 aa5.55□□□□□ -1.52
ATXN3-240ENST00000556339 PIWIL2Q8TC59 973 aaKnown RBP5.55□□□□□ -1.52
ATXN3-240ENST00000556339 FRMD6Q96NE9 622 aa5.55□□□□□ -1.52
ATXN3-240ENST00000556339 MIR1-1HGQ9H1L0 117 aa5.55□□□□□ -1.52
ATXN3-240ENST00000556339 TRIT1Q9H3H1 467 aaKnown RBP5.55□□□□□ -1.52
ATXN3-240ENST00000556339 IVNS1ABPQ9Y6Y0 642 aa5.55□□□□□ -1.52
ATXN3-240ENST00000556339 CDK12Q9NYV4 1490 aaPredicted RBP5.55□□□□□ -1.52
ATXN3-240ENST00000556339 RAB3GAP2Q9H2M9 1393 aa5.55□□□□□ -1.52
ATXN3-240ENST00000556339 SRCAPQ6ZRS2 3230 aa5.54□□□□□ -1.52
ATXN3-240ENST00000556339 FAM83GA6ND36 823 aa5.54□□□□□ -1.52
ATXN3-240ENST00000556339 TPP2P29144 1249 aaPredicted RBP5.54□□□□□ -1.52
ATXN3-240ENST00000556339 EVA1CP58658 441 aa5.54□□□□□ -1.52
ATXN3-240ENST00000556339 RPS26P62854 115 aaKnown RBP5.54□□□□□ -1.52
ATXN3-240ENST00000556339 KCNA10Q16322 511 aa5.54□□□□□ -1.52
ATXN3-240ENST00000556339 LILRA6Q6PI73 481 aa5.54□□□□□ -1.52
ATXN3-240ENST00000556339 SIAH1Q8IUQ4 282 aa5.54□□□□□ -1.52
ATXN3-240ENST00000556339 KCNN1Q92952 543 aa5.54□□□□□ -1.52
ATXN3-240ENST00000556339 KCNK12Q9HB15 430 aa5.54□□□□□ -1.52
ATXN3-240ENST00000556339 SPATA31E1Q6ZUB1 1445 aa5.54□□□□□ -1.52
ATXN3-240ENST00000556339 CLSPNQ9HAW4 1339 aa5.53□□□□□ -1.52
ATXN3-240ENST00000556339 P4HBP07237 508 aaKnown RBP5.53□□□□□ -1.52
ATXN3-240ENST00000556339 ERVFC1P60507 584 aa5.53□□□□□ -1.52
ATXN3-240ENST00000556339 KRT27Q7Z3Y8 459 aa5.53□□□□□ -1.52
ATXN3-240ENST00000556339 C1QL4Q86Z23 238 aa5.53□□□□□ -1.52
ATXN3-240ENST00000556339 CILP2Q8IUL8 1156 aa5.53□□□□□ -1.52
ATXN3-240ENST00000556339 TMEM87BQ96K49 555 aa5.53□□□□□ -1.52
ATXN3-240ENST00000556339 CDK19Q9BWU1 502 aa5.53□□□□□ -1.52
ATXN3-240ENST00000556339 ADAMTS10Q9H324 1103 aa5.53□□□□□ -1.52
ATXN3-240ENST00000556339 GPATCH2Q9NW75 528 aa5.53□□□□□ -1.52
ATXN3-240ENST00000556339 BTG4Q9NY30 223 aa5.53□□□□□ -1.52
ATXN3-240ENST00000556339 TJP2Q9UDY2 1190 aa5.53□□□□□ -1.52
ATXN3-240ENST00000556339 DUSP13Q9UII6 198 aa5.53□□□□□ -1.52
ATXN3-240ENST00000556339 KCNH3Q9ULD8 1083 aa5.53□□□□□ -1.52
ATXN3-240ENST00000556339 PCDHB5Q9Y5E4 795 aa5.53□□□□□ -1.52
ATXN3-240ENST00000556339 RGS12O14924 1447 aa5.53□□□□□ -1.52
ATXN3-240ENST00000556339 RGPD8O14715 1765 aaPredicted RBP5.52□□□□□ -1.53
ATXN3-240ENST00000556339 ATRNO75882 1429 aa5.52□□□□□ -1.53
ATXN3-240ENST00000556339 ZBTB7CA1YPR0 619 aa5.52□□□□□ -1.53
ATXN3-240ENST00000556339 ETV2O00321 342 aaPredicted RBP5.52□□□□□ -1.53
ATXN3-240ENST00000556339 NUAK1O60285 661 aa5.52□□□□□ -1.53
ATXN3-240ENST00000556339 ESR1P03372 595 aa5.52□□□□□ -1.53
ATXN3-240ENST00000556339 CENPBP07199 599 aaPredicted RBP5.52□□□□□ -1.53
ATXN3-240ENST00000556339 GNA15P30679 374 aa5.52□□□□□ -1.53
ATXN3-240ENST00000556339 EGR3Q06889 387 aa5.52□□□□□ -1.53
ATXN3-240ENST00000556339 VPS72Q15906 364 aa5.52□□□□□ -1.53
ATXN3-240ENST00000556339 SLC6A19Q695T7 634 aa5.52□□□□□ -1.53
ATXN3-240ENST00000556339 MRPL41Q8IXM3 137 aaKnown RBP5.52□□□□□ -1.53
ATXN3-240ENST00000556339 OXR1Q8N573 874 aa5.52□□□□□ -1.53
ATXN3-240ENST00000556339 PRDM11Q9NQV5 511 aa5.52□□□□□ -1.53
ATXN3-240ENST00000556339 TACC3Q9Y6A5 838 aa5.52□□□□□ -1.53
ATXN3-240ENST00000556339 KAT6BQ8WYB5 2073 aa5.52□□□□□ -1.53
ATXN3-240ENST00000556339 ARHGEF10O15013 1369 aa5.52□□□□□ -1.53
ATXN3-240ENST00000556339 EIF3AQ14152 1382 aaKnown RBP5.52□□□□□ -1.53
ATXN3-240ENST00000556339 TECPR2O15040 1411 aa5.51□□□□□ -1.53
ATXN3-240ENST00000556339 PIK3C2GO75747 1445 aa5.51□□□□□ -1.53
ATXN3-240ENST00000556339 LIG3P49916 1009 aa5.51□□□□□ -1.53
ATXN3-240ENST00000556339 CHMP4BP1P59074 171 aa5.51□□□□□ -1.53
ATXN3-240ENST00000556339 ZC3H6P61129 1189 aaKnown RBP5.51□□□□□ -1.53
ATXN3-240ENST00000556339 TSNAXIP1Q2TAA8 658 aa5.51□□□□□ -1.53
ATXN3-240ENST00000556339 ERICH6Q7L0X2 663 aa5.51□□□□□ -1.53
ATXN3-240ENST00000556339 DEFB132Q7Z7B7 95 aa5.51□□□□□ -1.53
ATXN3-240ENST00000556339 JARID2Q92833 1246 aaPredicted RBP5.51□□□□□ -1.53
ATXN3-240ENST00000556339 SBNO1A3KN83 1393 aa5.51□□□□□ -1.53
ATXN3-240ENST00000556339 BCL9LQ86UU0 1499 aa5.51□□□□□ -1.53
ATXN3-240ENST00000556339 PXDNQ92626 1479 aa5.51□□□□□ -1.53
ATXN3-240ENST00000556339 CDC42BPGQ6DT37 1551 aa5.5□□□□□ -1.53
ATXN3-240ENST00000556339 TNS3Q68CZ2 1445 aa5.5□□□□□ -1.53
ATXN3-240ENST00000556339 GFRA2O00451 464 aa5.5□□□□□ -1.53
ATXN3-240ENST00000556339 BPNT1O95861 308 aa5.5□□□□□ -1.53
ATXN3-240ENST00000556339 HPXP02790 462 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms