RNA–Protein interactions for RNA: ENST00000555816.5

ATXN3-233, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-233ENST00000555816 KCNQ2O43526 872 aa7.21□□□□□ -1.26
ATXN3-233ENST00000555816 NKG7Q16617 165 aa7.21□□□□□ -1.26
ATXN3-233ENST00000555816 WIPI1Q5MNZ9 446 aaPredicted RBP7.21□□□□□ -1.26
ATXN3-233ENST00000555816 CDKAL1Q5VV42 579 aa7.21□□□□□ -1.26
ATXN3-233ENST00000555816 SLC6A19Q695T7 634 aa7.21□□□□□ -1.26
ATXN3-233ENST00000555816 MRPL41Q8IXM3 137 aaKnown RBP7.21□□□□□ -1.26
ATXN3-233ENST00000555816 PMFBP1Q8TBY8 1022 aa7.21□□□□□ -1.26
ATXN3-233ENST00000555816 SETDB2Q96T68 719 aa7.21□□□□□ -1.26
ATXN3-233ENST00000555816 SPON1Q9HCB6 807 aa7.21□□□□□ -1.26
ATXN3-233ENST00000555816 AK5Q9Y6K8 562 aa7.21□□□□□ -1.26
ATXN3-233ENST00000555816 IVNS1ABPQ9Y6Y0 642 aa7.21□□□□□ -1.26
ATXN3-233ENST00000555816 PARD3Q8TEW0 1356 aa7.2□□□□□ -1.26
ATXN3-233ENST00000555816 CDC42BPGQ6DT37 1551 aa7.2□□□□□ -1.26
ATXN3-233ENST00000555816 PRR33A8MZF0 331 aa7.2□□□□□ -1.26
ATXN3-233ENST00000555816 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.2□□□□□ -1.26
ATXN3-233ENST00000555816 PRPF40AO75400 957 aaKnown RBP7.2□□□□□ -1.26
ATXN3-233ENST00000555816 P4HBP07237 508 aaKnown RBP7.2□□□□□ -1.26
ATXN3-233ENST00000555816 RAC2P15153 192 aa7.2□□□□□ -1.26
ATXN3-233ENST00000555816 ETV3P41162 512 aa7.2□□□□□ -1.26
ATXN3-233ENST00000555816 PDE4BQ07343 736 aa7.2□□□□□ -1.26
ATXN3-233ENST00000555816 PRAMEF13Q5VWM6 474 aa7.2□□□□□ -1.26
ATXN3-233ENST00000555816 FYB2Q5VWT5 728 aa7.2□□□□□ -1.26
ATXN3-233ENST00000555816 MPZL3Q6UWV2 235 aa7.2□□□□□ -1.26
ATXN3-233ENST00000555816 SPOCD1Q6ZMY3 1216 aa7.2□□□□□ -1.26
ATXN3-233ENST00000555816 AGMOQ6ZNB7 445 aa7.2□□□□□ -1.26
ATXN3-233ENST00000555816 SIAH1Q8IUQ4 282 aa7.2□□□□□ -1.26
ATXN3-233ENST00000555816 ZSCAN18Q8TBC5 510 aaPredicted RBP7.2□□□□□ -1.26
ATXN3-233ENST00000555816 LIN37Q96GY3 246 aaPredicted RBP7.2□□□□□ -1.26
ATXN3-233ENST00000555816 ALPK1Q96QP1 1244 aa7.2□□□□□ -1.26
ATXN3-233ENST00000555816 C14orf93Q9H972 538 aaKnown RBP7.2□□□□□ -1.26
ATXN3-233ENST00000555816 ANKRD30BQ9BXX2 1392 aa7.2□□□□□ -1.26
ATXN3-233ENST00000555816 SPHKAPQ2M3C7 1700 aa7.19□□□□□ -1.26
ATXN3-233ENST00000555816 H3BS24 57 aa7.19□□□□□ -1.26
ATXN3-233ENST00000555816 GRK4P32298 578 aa7.19□□□□□ -1.26
ATXN3-233ENST00000555816 CCDC85BQ15834 202 aaPredicted RBP7.19□□□□□ -1.26
ATXN3-233ENST00000555816 FBXO15Q8NCQ5 510 aaPredicted RBP7.19□□□□□ -1.26
ATXN3-233ENST00000555816 RIN3Q8TB24 985 aa7.19□□□□□ -1.26
ATXN3-233ENST00000555816 UBE2FQ969M7 185 aa7.19□□□□□ -1.26
ATXN3-233ENST00000555816 GZF1Q9H116 711 aaPredicted RBP7.19□□□□□ -1.26
ATXN3-233ENST00000555816 PRDM11Q9NQV5 511 aa7.19□□□□□ -1.26
ATXN3-233ENST00000555816 C19orf73Q9NVV2 129 aa7.19□□□□□ -1.26
ATXN3-233ENST00000555816 ADAM30Q9UKF2 790 aa7.19□□□□□ -1.26
ATXN3-233ENST00000555816 GPRASP1Q5JY77 1395 aa7.19□□□□□ -1.26
ATXN3-233ENST00000555816 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.18□□□□□ -1.26
ATXN3-233ENST00000555816 CBX7O95931 251 aa7.18□□□□□ -1.26
ATXN3-233ENST00000555816 TSNAXIP1Q2TAA8 658 aa7.18□□□□□ -1.26
ATXN3-233ENST00000555816 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.18□□□□□ -1.26
ATXN3-233ENST00000555816 CCDC84Q86UT8 332 aaPredicted RBP7.18□□□□□ -1.26
ATXN3-233ENST00000555816 PRAM1Q96QH2 718 aa7.18□□□□□ -1.26
ATXN3-233ENST00000555816 MIR1-1HGQ9H1L0 117 aa7.18□□□□□ -1.26
ATXN3-233ENST00000555816 POGKQ9P215 609 aa7.18□□□□□ -1.26
ATXN3-233ENST00000555816 CLTCL1P53675 1640 aa7.18□□□□□ -1.26
ATXN3-233ENST00000555816 USP32Q8NFA0 1604 aa7.18□□□□□ -1.26
ATXN3-233ENST00000555816 SPATA31A1Q5TZJ5 1347 aa7.18□□□□□ -1.26
ATXN3-233ENST00000555816 CNTNAP4Q9C0A0 1308 aa7.18□□□□□ -1.26
ATXN3-233ENST00000555816 DHX57Q6P158 1386 aaKnown RBP7.18□□□□□ -1.26
ATXN3-233ENST00000555816 YTHDC2Q9H6S0 1430 aaKnown RBP7.18□□□□□ -1.26
ATXN3-233ENST00000555816 EVA1CP58658 441 aa7.17□□□□□ -1.26
ATXN3-233ENST00000555816 SAFB2Q14151 953 aaKnown RBP eCLIP7.17□□□□□ -1.26
ATXN3-233ENST00000555816 SYDE1Q6ZW31 735 aaPredicted RBP7.17□□□□□ -1.26
ATXN3-233ENST00000555816 CILP2Q8IUL8 1156 aa7.17□□□□□ -1.26
ATXN3-233ENST00000555816 MCATQ8IVS2 390 aaKnown RBP7.17□□□□□ -1.26
ATXN3-233ENST00000555816 TRIT1Q9H3H1 467 aaKnown RBP7.17□□□□□ -1.26
ATXN3-233ENST00000555816 ZSWIM5Q9P217 1185 aa7.17□□□□□ -1.26
ATXN3-233ENST00000555816 NINLQ9Y2I6 1382 aa7.17□□□□□ -1.26
ATXN3-233ENST00000555816 RRBP1Q9P2E9 1410 aaKnown RBP7.17□□□□□ -1.26
ATXN3-233ENST00000555816 NRXN1Q9ULB1 1477 aa7.17□□□□□ -1.26
ATXN3-233ENST00000555816 RPL6Q02878 288 aaKnown RBP7.16□□□□□ -1.26
ATXN3-233ENST00000555816 TNK2Q07912 1038 aa7.16□□□□□ -1.26
ATXN3-233ENST00000555816 PRR23BQ6ZRT6 265 aa7.16□□□□□ -1.26
ATXN3-233ENST00000555816 NGDNQ8NEJ9 315 aaKnown RBP7.16□□□□□ -1.26
ATXN3-233ENST00000555816 TMEM87BQ96K49 555 aa7.16□□□□□ -1.26
ATXN3-233ENST00000555816 CEP131Q9UPN4 1083 aa7.16□□□□□ -1.26
ATXN3-233ENST00000555816 NFIBO00712 420 aa7.15□□□□□ -1.26
ATXN3-233ENST00000555816 PGRP06401 933 aa7.15□□□□□ -1.26
ATXN3-233ENST00000555816 CHRNA2Q15822 529 aa7.15□□□□□ -1.26
ATXN3-233ENST00000555816 TTC6Q86TZ1 520 aa7.15□□□□□ -1.26
ATXN3-233ENST00000555816 TCP11L2Q8N4U5 519 aa7.15□□□□□ -1.26
ATXN3-233ENST00000555816 ABHD4Q8TB40 342 aa7.15□□□□□ -1.26
ATXN3-233ENST00000555816 NOC4LQ9BVI4 516 aaKnown RBP7.15□□□□□ -1.26
ATXN3-233ENST00000555816 USP35Q9P2H5 1018 aa7.15□□□□□ -1.26
ATXN3-233ENST00000555816 TJP2Q9UDY2 1190 aa7.15□□□□□ -1.26
ATXN3-233ENST00000555816 ANKARQ7Z5J8 1434 aa7.15□□□□□ -1.27
ATXN3-233ENST00000555816 MARF1Q9Y4F3 1742 aaKnown RBP7.15□□□□□ -1.27
ATXN3-233ENST00000555816 BRWD3Q6RI45 1802 aa7.15□□□□□ -1.27
ATXN3-233ENST00000555816 PLSCR1O15162 318 aa7.14□□□□□ -1.27
ATXN3-233ENST00000555816 CFPP27918 469 aa7.14□□□□□ -1.27
ATXN3-233ENST00000555816 CDK8P49336 464 aa7.14□□□□□ -1.27
ATXN3-233ENST00000555816 LIG3P49916 1009 aa7.14□□□□□ -1.27
ATXN3-233ENST00000555816 ST13P50502 369 aaKnown RBP7.14□□□□□ -1.27
ATXN3-233ENST00000555816 C1QTNF8P60827 252 aa7.14□□□□□ -1.27
ATXN3-233ENST00000555816 ZC3H6P61129 1189 aaKnown RBP7.14□□□□□ -1.27
ATXN3-233ENST00000555816 SPATA31E1Q6ZUB1 1445 aa7.14□□□□□ -1.27
ATXN3-233ENST00000555816 CDH24Q86UP0 819 aa7.14□□□□□ -1.27
ATXN3-233ENST00000555816 MPHOSPH9Q99550 1183 aa7.14□□□□□ -1.27
ATXN3-233ENST00000555816 TMEM59LQ9UK28 342 aa7.14□□□□□ -1.27
ATXN3-233ENST00000555816 KCNH3Q9ULD8 1083 aa7.14□□□□□ -1.27
ATXN3-233ENST00000555816 THRAP3Q9Y2W1 955 aaKnown RBP7.14□□□□□ -1.27
ATXN3-233ENST00000555816 PCDHB5Q9Y5E4 795 aa7.14□□□□□ -1.27
ATXN3-233ENST00000555816 NWD2Q9ULI1 1742 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms