RNA–Protein interactions for RNA: ENST00000555759.1

SYNE3-204, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 2

Gene SYNE3, Length 5,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-204ENST00000555759 NCAPH2Q6IBW4 605 aa19.19■□□□□ 0.66
SYNE3-204ENST00000555759 TRIM42Q8IWZ5 723 aa19.19■□□□□ 0.66
SYNE3-204ENST00000555759 SCYL3Q8IZE3 742 aa19.19■□□□□ 0.66
SYNE3-204ENST00000555759 RWDD2AQ9UIY3 292 aa19.19■□□□□ 0.66
SYNE3-204ENST00000555759 DENND4BO75064 1496 aaPredicted RBP19.19■□□□□ 0.66
SYNE3-204ENST00000555759 DHX9Q08211 1270 aaKnown RBP19.19■□□□□ 0.66
SYNE3-204ENST00000555759 GEN1Q17RS7 908 aa19.19■□□□□ 0.66
SYNE3-204ENST00000555759 SH3GL3Q99963 347 aa19.19■□□□□ 0.66
SYNE3-204ENST00000555759 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.19■□□□□ 0.66
SYNE3-204ENST00000555759 NOVA2Q9UNW9 492 aaKnown RBP19.19■□□□□ 0.66
SYNE3-204ENST00000555759 DIXDC1Q155Q3 683 aa19.18■□□□□ 0.66
SYNE3-204ENST00000555759 C10orf76Q5T2E6 689 aa19.18■□□□□ 0.66
SYNE3-204ENST00000555759 TRPM2O94759 1503 aa19.18■□□□□ 0.66
SYNE3-204ENST00000555759 ANO9A1A5B4 782 aa19.18■□□□□ 0.66
SYNE3-204ENST00000555759 ABCB4P21439 1286 aa19.18■□□□□ 0.66
SYNE3-204ENST00000555759 SERPINB6P35237 376 aa19.18■□□□□ 0.66
SYNE3-204ENST00000555759 DRP2Q13474 957 aa19.18■□□□□ 0.66
SYNE3-204ENST00000555759 ATP10BO94823 1461 aa19.18■□□□□ 0.66
SYNE3-204ENST00000555759 ARHGEF10O15013 1369 aa19.18■□□□□ 0.66
SYNE3-204ENST00000555759 MFAP3LO75121 409 aa19.18■□□□□ 0.66
SYNE3-204ENST00000555759 CRCPO75575 148 aa19.18■□□□□ 0.66
SYNE3-204ENST00000555759 TRAPPC10P48553 1259 aa19.18■□□□□ 0.66
SYNE3-204ENST00000555759 PDCD7Q8N8D1 485 aaKnown RBP19.18■□□□□ 0.66
SYNE3-204ENST00000555759 FANCBQ8NB91 859 aa19.18■□□□□ 0.66
SYNE3-204ENST00000555759 NEK9Q8TD19 979 aa19.18■□□□□ 0.66
SYNE3-204ENST00000555759 ZNF532Q9HCE3 1301 aa19.18■□□□□ 0.66
SYNE3-204ENST00000555759 SLFN14P0C7P3 912 aa19.18■□□□□ 0.66
SYNE3-204ENST00000555759 KCNJ6P48051 423 aa19.18■□□□□ 0.66
SYNE3-204ENST00000555759 BLIDQ8IZY5 108 aa19.18■□□□□ 0.66
SYNE3-204ENST00000555759 MRPL44Q9H9J2 332 aaKnown RBP19.18■□□□□ 0.66
SYNE3-204ENST00000555759 KDM5CP41229 1560 aa19.18■□□□□ 0.66
SYNE3-204ENST00000555759 B4DLN1 442 aa19.18■□□□□ 0.66
SYNE3-204ENST00000555759 ATP5HO75947 161 aa19.18■□□□□ 0.66
SYNE3-204ENST00000555759 NLRP7Q8WX94 980 aa19.18■□□□□ 0.66
SYNE3-204ENST00000555759 HINFPQ9BQA5 517 aa19.18■□□□□ 0.66
SYNE3-204ENST00000555759 YTHDC2Q9H6S0 1430 aaKnown RBP19.17■□□□□ 0.66
SYNE3-204ENST00000555759 N4BP1O75113 896 aaKnown RBP19.17■□□□□ 0.66
SYNE3-204ENST00000555759 GCNT3O95395 438 aa19.17■□□□□ 0.66
SYNE3-204ENST00000555759 LMNB2Q03252 620 aa19.17■□□□□ 0.66
SYNE3-204ENST00000555759 PDCLQ13371 301 aa19.17■□□□□ 0.66
SYNE3-204ENST00000555759 C6orf118Q5T5N4 469 aa19.17■□□□□ 0.66
SYNE3-204ENST00000555759 ZNF658Q5TYW1 1059 aaPredicted RBP19.17■□□□□ 0.66
SYNE3-204ENST00000555759 NBPF5PQ86XG9 351 aaPredicted RBP19.17■□□□□ 0.66
SYNE3-204ENST00000555759 ST13P4Q8IZP2 240 aaPredicted RBP19.17■□□□□ 0.66
SYNE3-204ENST00000555759 ANKRD13CQ8N6S4 541 aa19.17■□□□□ 0.66
SYNE3-204ENST00000555759 USTQ9Y2C2 406 aa19.17■□□□□ 0.66
SYNE3-204ENST00000555759 SART1O43290 800 aaKnown RBP19.17■□□□□ 0.66
SYNE3-204ENST00000555759 IRX1P78414 480 aaPredicted RBP19.17■□□□□ 0.66
SYNE3-204ENST00000555759 ARID5BQ14865 1188 aa19.17■□□□□ 0.66
SYNE3-204ENST00000555759 ATP8A1Q9Y2Q0 1164 aa19.17■□□□□ 0.66
SYNE3-204ENST00000555759 SEC23IPQ9Y6Y8 1000 aaKnown RBP19.17■□□□□ 0.66
SYNE3-204ENST00000555759 ARHGEF35A5YM69 484 aa19.17■□□□□ 0.66
SYNE3-204ENST00000555759 RNF8O76064 485 aa19.17■□□□□ 0.66
SYNE3-204ENST00000555759 KIF23Q02241 960 aaPredicted RBP19.17■□□□□ 0.66
SYNE3-204ENST00000555759 ARHGAP4P98171 946 aa19.17■□□□□ 0.66
SYNE3-204ENST00000555759 CTAGE3PQ8IX95 158 aa19.17■□□□□ 0.66
SYNE3-204ENST00000555759 REXO1Q8N1G1 1221 aaKnown RBP19.17■□□□□ 0.66
SYNE3-204ENST00000555759 UHMK1Q8TAS1 419 aaKnown RBP19.17■□□□□ 0.66
SYNE3-204ENST00000555759 LPIN2Q92539 896 aa19.17■□□□□ 0.66
SYNE3-204ENST00000555759 IP6K1Q92551 441 aa19.17■□□□□ 0.66
SYNE3-204ENST00000555759 TBC1D7Q9P0N9 293 aa19.17■□□□□ 0.66
SYNE3-204ENST00000555759 MAST1Q9Y2H9 1570 aa19.16■□□□□ 0.66
SYNE3-204ENST00000555759 KDRP35968 1356 aa19.16■□□□□ 0.66
SYNE3-204ENST00000555759 WDR62O43379 1518 aa19.16■□□□□ 0.66
SYNE3-204ENST00000555759 LMNB1P20700 586 aa19.16■□□□□ 0.66
SYNE3-204ENST00000555759 ZAP70P43403 619 aa19.16■□□□□ 0.66
SYNE3-204ENST00000555759 ANKRD20A4Q4UJ75 823 aa19.16■□□□□ 0.66
SYNE3-204ENST00000555759 ANKRD20A8PQ5CZ79 823 aa19.16■□□□□ 0.66
SYNE3-204ENST00000555759 ANKRD20A2Q5SQ80 823 aa19.16■□□□□ 0.66
SYNE3-204ENST00000555759 ANKRD20A1Q5TYW2 823 aa19.16■□□□□ 0.66
SYNE3-204ENST00000555759 TBC1D1Q86TI0 1168 aaPredicted RBP19.16■□□□□ 0.66
SYNE3-204ENST00000555759 PSD3Q9NYI0 1048 aa19.16■□□□□ 0.66
SYNE3-204ENST00000555759 MED23Q9ULK4 1368 aa19.16■□□□□ 0.66
SYNE3-204ENST00000555759 ITGA6P23229 1130 aa19.16■□□□□ 0.66
SYNE3-204ENST00000555759 ESRRGP62508 458 aa19.16■□□□□ 0.66
SYNE3-204ENST00000555759 ADCY2Q08462 1091 aa19.16■□□□□ 0.66
SYNE3-204ENST00000555759 PLEKHF1Q96S99 279 aa19.16■□□□□ 0.66
SYNE3-204ENST00000555759 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.16■□□□□ 0.66
SYNE3-204ENST00000555759 ARHGAP44Q17R89 818 aa19.16■□□□□ 0.66
SYNE3-204ENST00000555759 CCDC93Q567U6 631 aa19.16■□□□□ 0.66
SYNE3-204ENST00000555759 ZNF790Q6PG37 636 aa19.16■□□□□ 0.66
SYNE3-204ENST00000555759 PARP9Q8IXQ6 854 aa19.16■□□□□ 0.66
SYNE3-204ENST00000555759 OGFOD1Q8N543 542 aa19.16■□□□□ 0.66
SYNE3-204ENST00000555759 MYCT1Q8N699 235 aa19.16■□□□□ 0.66
SYNE3-204ENST00000555759 RAB20Q9NX57 234 aa19.16■□□□□ 0.66
SYNE3-204ENST00000555759 SYNMO15061 1565 aa19.16■□□□□ 0.66
SYNE3-204ENST00000555759 ANKRD65E5RJM6 399 aa19.15■□□□□ 0.66
SYNE3-204ENST00000555759 GGCXP38435 758 aa19.15■□□□□ 0.66
SYNE3-204ENST00000555759 UNC5CLQ8IV45 518 aa19.15■□□□□ 0.66
SYNE3-204ENST00000555759 VTI1AQ96AJ9 217 aa19.15■□□□□ 0.66
SYNE3-204ENST00000555759 THAP9Q9H5L6 903 aa19.15■□□□□ 0.66
SYNE3-204ENST00000555759 NHEJ1Q9H9Q4 299 aaPredicted RBP19.15■□□□□ 0.66
SYNE3-204ENST00000555759 NDUFB9Q9Y6M9 179 aa19.15■□□□□ 0.66
SYNE3-204ENST00000555759 LAD1O00515 517 aa19.15■□□□□ 0.66
SYNE3-204ENST00000555759 PICALMQ13492 652 aa19.15■□□□□ 0.66
SYNE3-204ENST00000555759 MUM1L1Q5H9M0 696 aa19.15■□□□□ 0.66
SYNE3-204ENST00000555759 RSAD2Q8WXG1 361 aa19.15■□□□□ 0.66
SYNE3-204ENST00000555759 MAGOHBQ96A72 148 aaKnown RBP19.15■□□□□ 0.66
SYNE3-204ENST00000555759 CD2APQ9Y5K6 639 aa19.15■□□□□ 0.66
SYNE3-204ENST00000555759 CTIFO43310 598 aaKnown RBP19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms