RNA–Protein interactions for RNA: ENST00000555740.5

PCNX4-210, Transcript of pecanex 4, humanhuman

TSL 2

Gene PCNX4, Length 2,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-210ENST00000555740 STX8Q9UNK0 236 aa9.04□□□□□ -0.96
PCNX4-210ENST00000555740 KIF3AQ9Y496 699 aa9.04□□□□□ -0.96
PCNX4-210ENST00000555740 JAK2O60674 1132 aa9.04□□□□□ -0.96
PCNX4-210ENST00000555740 PLA2G6O60733 806 aa9.04□□□□□ -0.96
PCNX4-210ENST00000555740 HSP90AA1P07900 732 aaKnown RBP9.04□□□□□ -0.96
PCNX4-210ENST00000555740 PDCP20941 246 aa9.04□□□□□ -0.96
PCNX4-210ENST00000555740 GJB2P29033 226 aa9.04□□□□□ -0.96
PCNX4-210ENST00000555740 FKBP1BP68106 108 aa9.04□□□□□ -0.96
PCNX4-210ENST00000555740 CCT2P78371 535 aaKnown RBP9.04□□□□□ -0.96
PCNX4-210ENST00000555740 ZNF543Q08ER8 600 aa9.04□□□□□ -0.96
PCNX4-210ENST00000555740 MIGA2Q7L4E1 593 aa9.04□□□□□ -0.96
PCNX4-210ENST00000555740 CLEC10AQ8IUN9 316 aa9.04□□□□□ -0.96
PCNX4-210ENST00000555740 C12orf42Q96LP6 360 aa9.04□□□□□ -0.96
PCNX4-210ENST00000555740 KCNK17Q96T54 332 aa9.04□□□□□ -0.96
PCNX4-210ENST00000555740 KIAA1683Q9H0B3 1180 aa9.04□□□□□ -0.96
PCNX4-210ENST00000555740 GOLGB1Q14789 3259 aaKnown RBP9.03□□□□□ -0.96
PCNX4-210ENST00000555740 PPP1R3GB7ZBB8 358 aa9.03□□□□□ -0.96
PCNX4-210ENST00000555740 PRPF3O43395 683 aaKnown RBP9.03□□□□□ -0.96
PCNX4-210ENST00000555740 USP2O75604 605 aaPredicted RBP9.03□□□□□ -0.96
PCNX4-210ENST00000555740 FDPSP14324 419 aaKnown RBP9.03□□□□□ -0.96
PCNX4-210ENST00000555740 GPATCH4Q5T3I0 446 aaKnown RBP9.03□□□□□ -0.96
PCNX4-210ENST00000555740 BTNL9Q6UXG8 535 aa9.03□□□□□ -0.96
PCNX4-210ENST00000555740 LRRC47Q8N1G4 583 aaKnown RBP9.03□□□□□ -0.96
PCNX4-210ENST00000555740 SNCAIPQ9Y6H5 919 aa9.03□□□□□ -0.96
PCNX4-210ENST00000555740 CPLX1O14810 134 aa9.03□□□□□ -0.96
PCNX4-210ENST00000555740 BRD1O95696 1058 aa9.03□□□□□ -0.96
PCNX4-210ENST00000555740 PARP1P09874 1014 aaKnown RBP9.03□□□□□ -0.96
PCNX4-210ENST00000555740 INPP5BP32019 993 aa9.03□□□□□ -0.96
PCNX4-210ENST00000555740 NF2P35240 595 aa9.03□□□□□ -0.96
PCNX4-210ENST00000555740 IREB2P48200 963 aaKnown RBP9.03□□□□□ -0.96
PCNX4-210ENST00000555740 NUCB2P80303 420 aa9.03□□□□□ -0.96
PCNX4-210ENST00000555740 RAB3GAP1Q15042 981 aa9.03□□□□□ -0.96
PCNX4-210ENST00000555740 SLC35G1Q2M3R5 365 aa9.03□□□□□ -0.96
PCNX4-210ENST00000555740 MTMR8Q96EF0 704 aa9.03□□□□□ -0.96
PCNX4-210ENST00000555740 WRNIP1Q96S55 665 aa9.03□□□□□ -0.96
PCNX4-210ENST00000555740 GLIS2Q9BZE0 524 aaPredicted RBP9.03□□□□□ -0.96
PCNX4-210ENST00000555740 VCPKMTQ9H867 229 aa9.03□□□□□ -0.96
PCNX4-210ENST00000555740 RRAGCQ9HB90 399 aa9.03□□□□□ -0.96
PCNX4-210ENST00000555740 CLIP2Q9UDT6 1046 aa9.03□□□□□ -0.96
PCNX4-210ENST00000555740 SCAF8Q9UPN6 1271 aaKnown RBP9.03□□□□□ -0.96
PCNX4-210ENST00000555740 A0A1W2PRG0 241 aa9.02□□□□□ -0.96
PCNX4-210ENST00000555740 USP17L5A8MUK1 530 aa9.02□□□□□ -0.96
PCNX4-210ENST00000555740 hCG_1984214I3L0E3 225 aa9.02□□□□□ -0.96
PCNX4-210ENST00000555740 PLEKHA8P1O95397 391 aa9.02□□□□□ -0.96
PCNX4-210ENST00000555740 NDUFB10O96000 172 aa9.02□□□□□ -0.96
PCNX4-210ENST00000555740 ADD1P35611 737 aaKnown RBP9.02□□□□□ -0.96
PCNX4-210ENST00000555740 PSEN2P49810 448 aa9.02□□□□□ -0.96
PCNX4-210ENST00000555740 EAPPQ56P03 285 aaPredicted RBP9.02□□□□□ -0.96
PCNX4-210ENST00000555740 LDLRAD1Q5T700 205 aa9.02□□□□□ -0.96
PCNX4-210ENST00000555740 ZNF713Q8N859 430 aaPredicted RBP9.02□□□□□ -0.96
PCNX4-210ENST00000555740 NUP133Q8WUM0 1156 aa9.02□□□□□ -0.96
PCNX4-210ENST00000555740 WASF1Q92558 559 aa9.02□□□□□ -0.96
PCNX4-210ENST00000555740 LPAR1Q92633 364 aa9.02□□□□□ -0.96
PCNX4-210ENST00000555740 RIOX1Q9H6W3 641 aa9.02□□□□□ -0.96
PCNX4-210ENST00000555740 AS3MTQ9HBK9 375 aa9.02□□□□□ -0.96
PCNX4-210ENST00000555740 NMRK2Q9NPI5 230 aa9.02□□□□□ -0.96
PCNX4-210ENST00000555740 PPP1R12BO60237 982 aaPredicted RBP9.02□□□□□ -0.97
PCNX4-210ENST00000555740 DEXIO95424 95 aa9.02□□□□□ -0.97
PCNX4-210ENST00000555740 PTPRAP18433 802 aa9.02□□□□□ -0.97
PCNX4-210ENST00000555740 RXRAP19793 462 aa9.02□□□□□ -0.97
PCNX4-210ENST00000555740 PTPREP23469 700 aa9.02□□□□□ -0.97
PCNX4-210ENST00000555740 CLEC17AQ6ZS10 378 aa9.02□□□□□ -0.97
PCNX4-210ENST00000555740 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.02□□□□□ -0.97
PCNX4-210ENST00000555740 RAB11FIP4Q86YS3 637 aa9.02□□□□□ -0.97
PCNX4-210ENST00000555740 TRIM22Q8IYM9 498 aa9.02□□□□□ -0.97
PCNX4-210ENST00000555740 SRBD1Q8N5C6 995 aaKnown RBP9.02□□□□□ -0.97
PCNX4-210ENST00000555740 PRR7Q8TB68 274 aa9.02□□□□□ -0.97
PCNX4-210ENST00000555740 ORC3Q9UBD5 711 aaPredicted RBP9.02□□□□□ -0.97
PCNX4-210ENST00000555740 NAP1L2Q9ULW6 460 aaPredicted RBP9.02□□□□□ -0.97
PCNX4-210ENST00000555740 COL11A1P12107 1806 aaPredicted RBP9.01□□□□□ -0.97
PCNX4-210ENST00000555740 GCGRP47871 477 aa9.01□□□□□ -0.97
PCNX4-210ENST00000555740 SSRP1Q08945 709 aaKnown RBP9.01□□□□□ -0.97
PCNX4-210ENST00000555740 SWT1Q5T5J6 900 aaKnown RBP9.01□□□□□ -0.97
PCNX4-210ENST00000555740 SLFN13Q68D06 897 aa9.01□□□□□ -0.97
PCNX4-210ENST00000555740 ACER1Q8TDN7 264 aa9.01□□□□□ -0.97
PCNX4-210ENST00000555740 PPP1R12CQ9BZL4 782 aa9.01□□□□□ -0.97
PCNX4-210ENST00000555740 WDR33Q9C0J8 1336 aaKnown RBP9.01□□□□□ -0.97
PCNX4-210ENST00000555740 PICK1Q9NRD5 415 aa9.01□□□□□ -0.97
PCNX4-210ENST00000555740 THSD7BQ9C0I4 1608 aa9.01□□□□□ -0.97
PCNX4-210ENST00000555740 WDR46O15213 610 aaKnown RBP9.01□□□□□ -0.97
PCNX4-210ENST00000555740 SYT1P21579 422 aa9.01□□□□□ -0.97
PCNX4-210ENST00000555740 USP14P54578 494 aa9.01□□□□□ -0.97
PCNX4-210ENST00000555740 VGLL4Q14135 290 aa9.01□□□□□ -0.97
PCNX4-210ENST00000555740 PKN1Q16512 942 aa9.01□□□□□ -0.97
PCNX4-210ENST00000555740 TUSC1Q2TAM9 212 aa9.01□□□□□ -0.97
PCNX4-210ENST00000555740 PPP1R18Q6NYC8 613 aa9.01□□□□□ -0.97
PCNX4-210ENST00000555740 TEX2Q8IWB9 1127 aa9.01□□□□□ -0.97
PCNX4-210ENST00000555740 CCDC144CPQ8IYA2 1237 aa9.01□□□□□ -0.97
PCNX4-210ENST00000555740 ANKRD13AQ8IZ07 590 aa9.01□□□□□ -0.97
PCNX4-210ENST00000555740 STAG2Q8N3U4 1231 aa9.01□□□□□ -0.97
PCNX4-210ENST00000555740 PBXIP1Q96AQ6 731 aa9.01□□□□□ -0.97
PCNX4-210ENST00000555740 SH3GLB2Q9NR46 395 aa9.01□□□□□ -0.97
PCNX4-210ENST00000555740 KIAA1468Q9P260 1216 aa9.01□□□□□ -0.97
PCNX4-210ENST00000555740 MTMR6Q9Y217 621 aa9.01□□□□□ -0.97
PCNX4-210ENST00000555740 ZDHHC9Q9Y397 364 aa9.01□□□□□ -0.97
PCNX4-210ENST00000555740 PASKQ96RG2 1323 aa9□□□□□ -0.97
PCNX4-210ENST00000555740 F5H6K3 240 aa9□□□□□ -0.97
PCNX4-210ENST00000555740 CYTH3O43739 400 aa9□□□□□ -0.97
PCNX4-210ENST00000555740 STX6O43752 255 aa9□□□□□ -0.97
PCNX4-210ENST00000555740 KLRC3Q07444 240 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms