RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 ZNF865P0CJ78 1059 aaPredicted RBP16.29■□□□□ 0.2
PCNX4-209ENST00000555569 RARBP10826 455 aa16.29■□□□□ 0.2
PCNX4-209ENST00000555569 IRX6P78412 446 aaPredicted RBP16.29■□□□□ 0.2
PCNX4-209ENST00000555569 LRRC41Q15345 812 aa16.29■□□□□ 0.2
PCNX4-209ENST00000555569 MAMDC4Q6UXC1 1216 aa16.29■□□□□ 0.2
PCNX4-209ENST00000555569 ZNF467Q7Z7K2 595 aaPredicted RBP16.29■□□□□ 0.2
PCNX4-209ENST00000555569 GDF15Q99988 308 aa16.29■□□□□ 0.2
PCNX4-209ENST00000555569 TMEM47Q9BQJ4 181 aa16.29■□□□□ 0.2
PCNX4-209ENST00000555569 RNF41Q9H4P4 317 aaPredicted RBP16.29■□□□□ 0.2
PCNX4-209ENST00000555569 ACAD9Q9H845 621 aa16.29■□□□□ 0.2
PCNX4-209ENST00000555569 HOMER2Q9NSB8 354 aa16.29■□□□□ 0.2
PCNX4-209ENST00000555569 PRR12Q9ULL5 1215 aa16.29■□□□□ 0.2
PCNX4-209ENST00000555569 CNPY2Q9Y2B0 182 aa16.29■□□□□ 0.2
PCNX4-209ENST00000555569 ZNF536O15090 1300 aa16.28■□□□□ 0.2
PCNX4-209ENST00000555569 AKR1A1P14550 325 aa16.28■□□□□ 0.2
PCNX4-209ENST00000555569 PDE4AP27815 886 aa16.28■□□□□ 0.2
PCNX4-209ENST00000555569 BMP8BP34820 402 aa16.28■□□□□ 0.2
PCNX4-209ENST00000555569 ATN1P54259 1190 aaPredicted RBP16.28■□□□□ 0.2
PCNX4-209ENST00000555569 TKFCQ3LXA3 575 aa16.28■□□□□ 0.2
PCNX4-209ENST00000555569 AGBL1Q96MI9 1066 aa16.28■□□□□ 0.2
PCNX4-209ENST00000555569 XPNPEP3Q9NQH7 507 aa16.28■□□□□ 0.2
PCNX4-209ENST00000555569 RNF146Q9NTX7 359 aa16.28■□□□□ 0.2
PCNX4-209ENST00000555569 ZNF213O14771 459 aa16.27■□□□□ 0.2
PCNX4-209ENST00000555569 SNAI1O95863 264 aaPredicted RBP16.27■□□□□ 0.2
PCNX4-209ENST00000555569 ALAS1P13196 640 aa16.27■□□□□ 0.2
PCNX4-209ENST00000555569 MAGEA10P43363 369 aaPredicted RBP16.27■□□□□ 0.2
PCNX4-209ENST00000555569 RTP1P59025 263 aa16.27■□□□□ 0.2
PCNX4-209ENST00000555569 SNAP25P60880 206 aa16.27■□□□□ 0.2
PCNX4-209ENST00000555569 CCDC174Q6PII3 467 aa16.27■□□□□ 0.2
PCNX4-209ENST00000555569 ESR2Q92731 530 aa16.27■□□□□ 0.2
PCNX4-209ENST00000555569 FGD4Q96M96 766 aa16.27■□□□□ 0.2
PCNX4-209ENST00000555569 TTC14Q96N46 770 aa16.27■□□□□ 0.2
PCNX4-209ENST00000555569 DSCC1Q9BVC3 393 aa16.27■□□□□ 0.2
PCNX4-209ENST00000555569 PCDH10Q9P2E7 1040 aa16.27■□□□□ 0.2
PCNX4-209ENST00000555569 NEDD4P46934 1319 aa16.26■□□□□ 0.19
PCNX4-209ENST00000555569 PGK1P00558 417 aa16.26■□□□□ 0.19
PCNX4-209ENST00000555569 ADCYAP1R1P41586 468 aa16.26■□□□□ 0.19
PCNX4-209ENST00000555569 TTC22Q5TAA0 569 aa16.26■□□□□ 0.19
PCNX4-209ENST00000555569 TTBK2Q6IQ55 1244 aa16.26■□□□□ 0.19
PCNX4-209ENST00000555569 BTNL9Q6UXG8 535 aa16.26■□□□□ 0.19
PCNX4-209ENST00000555569 SLC39A5Q6ZMH5 540 aa16.26■□□□□ 0.19
PCNX4-209ENST00000555569 RNF180Q86T96 592 aa16.26■□□□□ 0.19
PCNX4-209ENST00000555569 TRERF1Q96PN7 1200 aa16.26■□□□□ 0.19
PCNX4-209ENST00000555569 A1CFQ9NQ94 594 aaKnown RBP16.26■□□□□ 0.19
PCNX4-209ENST00000555569 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.26■□□□□ 0.19
PCNX4-209ENST00000555569 ZHX1Q9UKY1 873 aaPredicted RBP16.26■□□□□ 0.19
PCNX4-209ENST00000555569 FAM184BQ9ULE4 1060 aa16.26■□□□□ 0.19
PCNX4-209ENST00000555569 FRMPD2Q68DX3 1309 aaPredicted RBP16.25■□□□□ 0.19
PCNX4-209ENST00000555569 POTEB2H3BUK9 544 aa16.25■□□□□ 0.19
PCNX4-209ENST00000555569 GSPT1P15170 499 aaKnown RBP16.25■□□□□ 0.19
PCNX4-209ENST00000555569 SLC16A2P36021 539 aa16.25■□□□□ 0.19
PCNX4-209ENST00000555569 NT5C2P49902 561 aa16.25■□□□□ 0.19
PCNX4-209ENST00000555569 SYDE2Q5VT97 1194 aa16.25■□□□□ 0.19
PCNX4-209ENST00000555569 FAM133AQ8N9E0 248 aa16.25■□□□□ 0.19
PCNX4-209ENST00000555569 LENG1Q96BZ8 264 aaPredicted RBP16.25■□□□□ 0.19
PCNX4-209ENST00000555569 RANBP17Q9H2T7 1088 aaKnown RBP16.25■□□□□ 0.19
PCNX4-209ENST00000555569 GPCPD1Q9NPB8 672 aa16.25■□□□□ 0.19
PCNX4-209ENST00000555569 CCPG1Q9ULG6 757 aa16.25■□□□□ 0.19
PCNX4-209ENST00000555569 PHF24Q9UPV7 400 aa16.25■□□□□ 0.19
PCNX4-209ENST00000555569 ATP11BQ9Y2G3 1177 aa16.25■□□□□ 0.19
PCNX4-209ENST00000555569 DNAH12Q6ZR08 3092 aa16.25■□□□□ 0.19
PCNX4-209ENST00000555569 ICAM1P05362 532 aa16.24■□□□□ 0.19
PCNX4-209ENST00000555569 PDHBP11177 359 aa16.24■□□□□ 0.19
PCNX4-209ENST00000555569 CNTN2Q02246 1040 aa16.24■□□□□ 0.19
PCNX4-209ENST00000555569 ACVR2BQ13705 512 aa16.24■□□□□ 0.19
PCNX4-209ENST00000555569 IMMTQ16891 758 aaKnown RBP16.24■□□□□ 0.19
PCNX4-209ENST00000555569 MUM1L1Q5H9M0 696 aa16.24■□□□□ 0.19
PCNX4-209ENST00000555569 ARMCX2Q7L311 632 aa16.24■□□□□ 0.19
PCNX4-209ENST00000555569 FERMT2Q96AC1 680 aa16.24■□□□□ 0.19
PCNX4-209ENST00000555569 ZKSCAN3Q9BRR0 538 aa16.24■□□□□ 0.19
PCNX4-209ENST00000555569 ABHD16BQ9H3Z7 469 aa16.24■□□□□ 0.19
PCNX4-209ENST00000555569 CTNNA3Q9UI47 895 aa16.24■□□□□ 0.19
PCNX4-209ENST00000555569 LCTP09848 1927 aa16.23■□□□□ 0.19
PCNX4-209ENST00000555569 ADAMTS4O75173 837 aa16.23■□□□□ 0.19
PCNX4-209ENST00000555569 ZNF543Q08ER8 600 aa16.23■□□□□ 0.19
PCNX4-209ENST00000555569 SNX17Q15036 470 aa16.23■□□□□ 0.19
PCNX4-209ENST00000555569 TRIM60Q495X7 471 aa16.23■□□□□ 0.19
PCNX4-209ENST00000555569 CCDC178Q5BJE1 867 aa16.23■□□□□ 0.19
PCNX4-209ENST00000555569 IQCA1Q86XH1 822 aa16.23■□□□□ 0.19
PCNX4-209ENST00000555569 CCDC144CPQ8IYA2 1237 aa16.23■□□□□ 0.19
PCNX4-209ENST00000555569 UBE2OQ9C0C9 1292 aaKnown RBP16.23■□□□□ 0.19
PCNX4-209ENST00000555569 IL25Q9H293 177 aa16.23■□□□□ 0.19
PCNX4-209ENST00000555569 SYNRGQ9UMZ2 1314 aa16.22■□□□□ 0.19
PCNX4-209ENST00000555569 LTBP2Q14767 1821 aa16.22■□□□□ 0.19
PCNX4-209ENST00000555569 SOWAHBA6NEL2 793 aa16.22■□□□□ 0.19
PCNX4-209ENST00000555569 ASB14A6NK59 587 aa16.22■□□□□ 0.19
PCNX4-209ENST00000555569 B4E1Z4 1266 aa16.22■□□□□ 0.19
PCNX4-209ENST00000555569 KDM4AO75164 1064 aa16.22■□□□□ 0.19
PCNX4-209ENST00000555569 DUSP11O75319 330 aaKnown RBP16.22■□□□□ 0.19
PCNX4-209ENST00000555569 SNHG28P0DPA3 235 aa16.22■□□□□ 0.19
PCNX4-209ENST00000555569 MDM2Q00987 491 aaPredicted RBP16.22■□□□□ 0.19
PCNX4-209ENST00000555569 CCDC144BQ3MJ40 725 aa16.22■□□□□ 0.19
PCNX4-209ENST00000555569 C1orf53Q5VUE5 145 aa16.22■□□□□ 0.19
PCNX4-209ENST00000555569 DGKHQ86XP1 1220 aa16.22■□□□□ 0.19
PCNX4-209ENST00000555569 LBHD1Q9BQE6 289 aaPredicted RBP16.22■□□□□ 0.19
PCNX4-209ENST00000555569 TSEN34Q9BSV6 310 aaKnown RBP16.22■□□□□ 0.19
PCNX4-209ENST00000555569 CYP39A1Q9NYL5 469 aa16.22■□□□□ 0.19
PCNX4-209ENST00000555569 PRKAG2Q9UGJ0 569 aa16.22■□□□□ 0.19
PCNX4-209ENST00000555569 RAD50Q92878 1312 aa16.21■□□□□ 0.19
PCNX4-209ENST00000555569 NSMFQ6X4W1 530 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms