RNA–Protein interactions for RNA: ENST00000554927.1

TUBB3-207, Transcript of tubulin beta 3 class III, humanhuman

TSL 2

Gene TUBB3, Length 561 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-207ENST00000554927 NUP88Q99567 741 aaPredicted RBP15.89■□□□□ 0.13
TUBB3-207ENST00000554927 BCL11AQ9H165 835 aa15.89■□□□□ 0.13
TUBB3-207ENST00000554927 UPF3AQ9H1J1 476 aaKnown RBP15.89■□□□□ 0.13
TUBB3-207ENST00000554927 SLC4A7Q9Y6M7 1214 aa15.89■□□□□ 0.13
TUBB3-207ENST00000554927 IFIT2P09913 472 aaKnown RBP15.88■□□□□ 0.13
TUBB3-207ENST00000554927 MYOGP15173 224 aa15.88■□□□□ 0.13
TUBB3-207ENST00000554927 BEX3Q00994 111 aa15.88■□□□□ 0.13
TUBB3-207ENST00000554927 ANKRD35Q8N283 1001 aa15.88■□□□□ 0.13
TUBB3-207ENST00000554927 ABHD16BQ9H3Z7 469 aa15.88■□□□□ 0.13
TUBB3-207ENST00000554927 ATP8A2Q9NTI2 1148 aa15.88■□□□□ 0.13
TUBB3-207ENST00000554927 RIPK3Q9Y572 518 aa15.88■□□□□ 0.13
TUBB3-207ENST00000554927 UMODL1Q5DID0 1318 aa15.88■□□□□ 0.13
TUBB3-207ENST00000554927 COL11A1P12107 1806 aaPredicted RBP15.87■□□□□ 0.13
TUBB3-207ENST00000554927 DNAJC25-GNG10A0A024R161 153 aa15.87■□□□□ 0.13
TUBB3-207ENST00000554927 SMIM22K7EJ46 135 aa15.87■□□□□ 0.13
TUBB3-207ENST00000554927 GTPBP6O43824 516 aaPredicted RBP15.87■□□□□ 0.13
TUBB3-207ENST00000554927 ZBED4O75132 1171 aa15.87■□□□□ 0.13
TUBB3-207ENST00000554927 RAB11FIP3O75154 756 aa15.87■□□□□ 0.13
TUBB3-207ENST00000554927 MBD4O95243 580 aa15.87■□□□□ 0.13
TUBB3-207ENST00000554927 CD4P01730 458 aa15.87■□□□□ 0.13
TUBB3-207ENST00000554927 CXCL17Q6UXB2 119 aa15.87■□□□□ 0.13
TUBB3-207ENST00000554927 ARMCX2Q7L311 632 aa15.87■□□□□ 0.13
TUBB3-207ENST00000554927 ZNF467Q7Z7K2 595 aaPredicted RBP15.87■□□□□ 0.13
TUBB3-207ENST00000554927 LRFN3Q9BTN0 628 aa15.87■□□□□ 0.13
TUBB3-207ENST00000554927 EPHX3Q9H6B9 360 aa15.87■□□□□ 0.13
TUBB3-207ENST00000554927 IL1RAPL2Q9NP60 686 aa15.87■□□□□ 0.13
TUBB3-207ENST00000554927 ZBTB40Q9NUA8 1239 aa15.87■□□□□ 0.13
TUBB3-207ENST00000554927 PCDHA11Q9Y5I1 949 aa15.87■□□□□ 0.13
TUBB3-207ENST00000554927 TCRBV5S4A2TA0A5A2 114 aa15.86■□□□□ 0.13
TUBB3-207ENST00000554927 USP17L12C9JPN9 530 aa15.86■□□□□ 0.13
TUBB3-207ENST00000554927 USP17L21D6R901 530 aa15.86■□□□□ 0.13
TUBB3-207ENST00000554927 ERC2O15083 957 aa15.86■□□□□ 0.13
TUBB3-207ENST00000554927 ATP2A2P16615 1042 aaKnown RBP15.86■□□□□ 0.13
TUBB3-207ENST00000554927 TMEM31Q5JXX7 168 aa15.86■□□□□ 0.13
TUBB3-207ENST00000554927 C12orf60Q5U649 245 aa15.86■□□□□ 0.13
TUBB3-207ENST00000554927 C16orf86Q6ZW13 317 aa15.86■□□□□ 0.13
TUBB3-207ENST00000554927 RPUSD2Q8IZ73 545 aaKnown RBP15.86■□□□□ 0.13
TUBB3-207ENST00000554927 RAVER2Q9HCJ3 691 aaKnown RBP15.86■□□□□ 0.13
TUBB3-207ENST00000554927 TCF20Q9UGU0 1960 aaKnown RBP15.86■□□□□ 0.13
TUBB3-207ENST00000554927 PARP14Q460N5 1801 aa15.85■□□□□ 0.13
TUBB3-207ENST00000554927 TNFAIP2Q03169 654 aa15.85■□□□□ 0.13
TUBB3-207ENST00000554927 ITGA7Q13683 1181 aa15.85■□□□□ 0.13
TUBB3-207ENST00000554927 CCDC144CPQ8IYA2 1237 aa15.85■□□□□ 0.13
TUBB3-207ENST00000554927 PRPF38AQ8NAV1 312 aaKnown RBP15.85■□□□□ 0.13
TUBB3-207ENST00000554927 KIFC2Q96AC6 838 aa15.85■□□□□ 0.13
TUBB3-207ENST00000554927 CERS4Q9HA82 394 aa15.85■□□□□ 0.13
TUBB3-207ENST00000554927 FBXO40Q9UH90 709 aa15.85■□□□□ 0.13
TUBB3-207ENST00000554927 RFXAPO00287 272 aa15.84■□□□□ 0.13
TUBB3-207ENST00000554927 ZEB2O60315 1214 aa15.84■□□□□ 0.13
TUBB3-207ENST00000554927 CABYRO75952 493 aa15.84■□□□□ 0.13
TUBB3-207ENST00000554927 SLFNL1Q499Z3 407 aa15.84■□□□□ 0.13
TUBB3-207ENST00000554927 TMEM67Q5HYA8 995 aa15.84■□□□□ 0.13
TUBB3-207ENST00000554927 NOC4LQ9BVI4 516 aaKnown RBP15.84■□□□□ 0.13
TUBB3-207ENST00000554927 AP5M1Q9H0R1 490 aa15.84■□□□□ 0.13
TUBB3-207ENST00000554927 TRPV6Q9H1D0 765 aa15.84■□□□□ 0.13
TUBB3-207ENST00000554927 HOMER2Q9NSB8 354 aa15.84■□□□□ 0.13
TUBB3-207ENST00000554927 ARIH1Q9Y4X5 557 aaPredicted RBP15.84■□□□□ 0.13
TUBB3-207ENST00000554927 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.83■□□□□ 0.12
TUBB3-207ENST00000554927 F5H6K3 240 aa15.83■□□□□ 0.12
TUBB3-207ENST00000554927 CTAGE5O15320 804 aa15.83■□□□□ 0.12
TUBB3-207ENST00000554927 CA3P07451 260 aa15.83■□□□□ 0.12
TUBB3-207ENST00000554927 KLRC3Q07444 240 aa15.83■□□□□ 0.12
TUBB3-207ENST00000554927 FSCN1Q16658 493 aaKnown RBP15.83■□□□□ 0.12
TUBB3-207ENST00000554927 TLK2Q86UE8 772 aa15.83■□□□□ 0.12
TUBB3-207ENST00000554927 STK11IPQ8N1F8 1099 aa15.83■□□□□ 0.12
TUBB3-207ENST00000554927 SLC43A3Q8NBI5 491 aa15.83■□□□□ 0.12
TUBB3-207ENST00000554927 SCLYQ96I15 445 aa15.83■□□□□ 0.12
TUBB3-207ENST00000554927 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.83■□□□□ 0.12
TUBB3-207ENST00000554927 WNT8AQ9H1J5 351 aa15.83■□□□□ 0.12
TUBB3-207ENST00000554927 COG5Q9UP83 839 aa15.83■□□□□ 0.12
TUBB3-207ENST00000554927 MTCH2Q9Y6C9 303 aa15.83■□□□□ 0.12
TUBB3-207ENST00000554927 SLC4A4Q9Y6R1 1079 aa15.83■□□□□ 0.12
TUBB3-207ENST00000554927 MYH8P13535 1937 aa15.83■□□□□ 0.12
TUBB3-207ENST00000554927 ATP2A1O14983 1001 aa15.82■□□□□ 0.12
TUBB3-207ENST00000554927 B4GALT4O60513 344 aa15.82■□□□□ 0.12
TUBB3-207ENST00000554927 NDUFB10O96000 172 aa15.82■□□□□ 0.12
TUBB3-207ENST00000554927 ADD2P35612 726 aa15.82■□□□□ 0.12
TUBB3-207ENST00000554927 PSMC6P62333 389 aa15.82■□□□□ 0.12
TUBB3-207ENST00000554927 CNTN2Q02246 1040 aa15.82■□□□□ 0.12
TUBB3-207ENST00000554927 CHST13Q8NET6 341 aa15.82■□□□□ 0.12
TUBB3-207ENST00000554927 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.82■□□□□ 0.12
TUBB3-207ENST00000554927 FGD4Q96M96 766 aa15.82■□□□□ 0.12
TUBB3-207ENST00000554927 ISY1Q9ULR0 285 aaKnown RBP15.82■□□□□ 0.12
TUBB3-207ENST00000554927 CHD7Q9P2D1 2997 aa15.82■□□□□ 0.12
TUBB3-207ENST00000554927 FAM86C2PA6NEL3 165 aa15.81■□□□□ 0.12
TUBB3-207ENST00000554927 ASTN1O14525 1302 aa15.81■□□□□ 0.12
TUBB3-207ENST00000554927 DYNC1LI2O43237 492 aaPredicted RBP15.81■□□□□ 0.12
TUBB3-207ENST00000554927 TTLL4Q14679 1199 aa15.81■□□□□ 0.12
TUBB3-207ENST00000554927 KRT40Q6A162 431 aa15.81■□□□□ 0.12
TUBB3-207ENST00000554927 CTR9Q6PD62 1173 aa15.81■□□□□ 0.12
TUBB3-207ENST00000554927 DEFB128Q7Z7B8 93 aa15.81■□□□□ 0.12
TUBB3-207ENST00000554927 ARNTL2Q8WYA1 636 aa15.81■□□□□ 0.12
TUBB3-207ENST00000554927 HLA-CQ95604 372 aa15.81■□□□□ 0.12
TUBB3-207ENST00000554927 MKNK2Q9HBH9 465 aa15.81■□□□□ 0.12
TUBB3-207ENST00000554927 PAG1Q9NWQ8 432 aa15.81■□□□□ 0.12
TUBB3-207ENST00000554927 CLIP2Q9UDT6 1046 aa15.81■□□□□ 0.12
TUBB3-207ENST00000554927 GBF1Q92538 1859 aa15.8■□□□□ 0.12
TUBB3-207ENST00000554927 GRIN2DO15399 1336 aa15.8■□□□□ 0.12
TUBB3-207ENST00000554927 NKX3-2P78367 333 aa15.8■□□□□ 0.12
TUBB3-207ENST00000554927 SIRT2Q8IXJ6 389 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms