RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 RNPC3Q96LT9 517 aaKnown RBP17.44■□□□□ 0.38
SYNE3-203ENST00000554873 EPB41L4AQ9HCS5 686 aaPredicted RBP17.44■□□□□ 0.38
SYNE3-203ENST00000554873 TBC1D2BQ9UPU7 963 aa17.44■□□□□ 0.38
SYNE3-203ENST00000554873 TNS2Q63HR2 1409 aa17.44■□□□□ 0.38
SYNE3-203ENST00000554873 ANKRD18BA2A2Z9 1011 aa17.44■□□□□ 0.38
SYNE3-203ENST00000554873 PDE8BO95263 885 aa17.44■□□□□ 0.38
SYNE3-203ENST00000554873 FAM107AO95990 144 aa17.44■□□□□ 0.38
SYNE3-203ENST00000554873 ATP1A1P05023 1023 aaKnown RBP17.44■□□□□ 0.38
SYNE3-203ENST00000554873 PEX19P40855 299 aa17.44■□□□□ 0.38
SYNE3-203ENST00000554873 RPS6KA3P51812 740 aa17.44■□□□□ 0.38
SYNE3-203ENST00000554873 HDLBPQ00341 1268 aaKnown RBP17.44■□□□□ 0.38
SYNE3-203ENST00000554873 MORC3Q14149 939 aa17.44■□□□□ 0.38
SYNE3-203ENST00000554873 CAPZA3Q96KX2 299 aa17.44■□□□□ 0.38
SYNE3-203ENST00000554873 HAUS2Q9NVX0 235 aa17.44■□□□□ 0.38
SYNE3-203ENST00000554873 GUCA1BQ9UMX6 200 aa17.44■□□□□ 0.38
SYNE3-203ENST00000554873 ECM29Q5VYK3 1845 aa17.44■□□□□ 0.38
SYNE3-203ENST00000554873 SRGAP2O75044 1071 aa17.43■□□□□ 0.38
SYNE3-203ENST00000554873 GYPCP04921 128 aa17.43■□□□□ 0.38
SYNE3-203ENST00000554873 NNTQ13423 1086 aa17.43■□□□□ 0.38
SYNE3-203ENST00000554873 RASSF8Q8NHQ8 419 aa17.43■□□□□ 0.38
SYNE3-203ENST00000554873 CAGE1Q8TC20 777 aa17.43■□□□□ 0.38
SYNE3-203ENST00000554873 FXR1P51114 621 aaKnown RBP eCLIP17.43■□□□□ 0.38
SYNE3-203ENST00000554873 SAFBQ15424 915 aaKnown RBP eCLIP17.43■□□□□ 0.38
SYNE3-203ENST00000554873 NLRP10Q86W26 655 aa17.43■□□□□ 0.38
SYNE3-203ENST00000554873 CCDC82Q8N4S0 544 aa17.43■□□□□ 0.38
SYNE3-203ENST00000554873 OR8K1Q8NGG5 319 aa17.43■□□□□ 0.38
SYNE3-203ENST00000554873 SLF1Q9BQI6 1058 aa17.43■□□□□ 0.38
SYNE3-203ENST00000554873 IRAK4Q9NWZ3 460 aa17.43■□□□□ 0.38
SYNE3-203ENST00000554873 PCDHB6Q9Y5E3 794 aa17.43■□□□□ 0.38
SYNE3-203ENST00000554873 ARID4AP29374 1257 aaPredicted RBP17.43■□□□□ 0.38
SYNE3-203ENST00000554873 GUCY1A3Q02108 690 aa17.43■□□□□ 0.38
SYNE3-203ENST00000554873 KCNB1Q14721 858 aa17.43■□□□□ 0.38
SYNE3-203ENST00000554873 FILIP1LQ4L180 1135 aa17.43■□□□□ 0.38
SYNE3-203ENST00000554873 GIGYF2Q6Y7W6 1299 aaKnown RBP17.43■□□□□ 0.38
SYNE3-203ENST00000554873 TAX1BP1Q86VP1 789 aa17.43■□□□□ 0.38
SYNE3-203ENST00000554873 WASF1Q92558 559 aa17.43■□□□□ 0.38
SYNE3-203ENST00000554873 ZBTB10Q96DT7 871 aa17.43■□□□□ 0.38
SYNE3-203ENST00000554873 SEC31BQ9NQW1 1179 aa17.43■□□□□ 0.38
SYNE3-203ENST00000554873 ADD3Q9UEY8 706 aaKnown RBP17.43■□□□□ 0.38
SYNE3-203ENST00000554873 ITIH6Q6UXX5 1313 aa17.42■□□□□ 0.38
SYNE3-203ENST00000554873 ERCC5P28715 1186 aaPredicted RBP17.42■□□□□ 0.38
SYNE3-203ENST00000554873 PRPHP41219 470 aa17.42■□□□□ 0.38
SYNE3-203ENST00000554873 CTSWP56202 376 aa17.42■□□□□ 0.38
SYNE3-203ENST00000554873 USP49Q70CQ1 688 aa17.42■□□□□ 0.38
SYNE3-203ENST00000554873 SH2D3CQ8N5H7 860 aa17.42■□□□□ 0.38
SYNE3-203ENST00000554873 TCP11Q8WWU5 503 aa17.42■□□□□ 0.38
SYNE3-203ENST00000554873 CTAGE1Q96RT6 745 aa17.42■□□□□ 0.38
SYNE3-203ENST00000554873 NAPBQ9H115 298 aa17.42■□□□□ 0.38
SYNE3-203ENST00000554873 HAUS4Q9H6D7 363 aa17.42■□□□□ 0.38
SYNE3-203ENST00000554873 PRDM11Q9NQV5 511 aa17.42■□□□□ 0.38
SYNE3-203ENST00000554873 MGRN1O60291 552 aa17.42■□□□□ 0.38
SYNE3-203ENST00000554873 IL2RBP14784 551 aa17.42■□□□□ 0.38
SYNE3-203ENST00000554873 PLCD1P51178 756 aa17.42■□□□□ 0.38
SYNE3-203ENST00000554873 NR5A1Q13285 461 aa17.42■□□□□ 0.38
SYNE3-203ENST00000554873 EMBQ6PCB8 327 aa17.42■□□□□ 0.38
SYNE3-203ENST00000554873 CMTR1Q8N1G2 835 aaKnown RBP17.42■□□□□ 0.38
SYNE3-203ENST00000554873 TRIML1Q8N9V2 468 aa17.42■□□□□ 0.38
SYNE3-203ENST00000554873 JAKMIP2Q96AA8 810 aa17.42■□□□□ 0.38
SYNE3-203ENST00000554873 ZKSCAN3Q9BRR0 538 aa17.42■□□□□ 0.38
SYNE3-203ENST00000554873 ABHD10Q9NUJ1 306 aa17.42■□□□□ 0.38
SYNE3-203ENST00000554873 ZBTB12Q9Y330 459 aaPredicted RBP17.42■□□□□ 0.38
SYNE3-203ENST00000554873 MAP3K15Q6ZN16 1313 aa17.42■□□□□ 0.38
SYNE3-203ENST00000554873 PES1O00541 588 aaKnown RBP17.41■□□□□ 0.38
SYNE3-203ENST00000554873 EPHB4P54760 987 aa17.41■□□□□ 0.38
SYNE3-203ENST00000554873 XRCC4Q13426 336 aa17.41■□□□□ 0.38
SYNE3-203ENST00000554873 PDCD2Q16342 344 aaPredicted RBP17.41■□□□□ 0.38
SYNE3-203ENST00000554873 RILPL1Q5EBL4 403 aa17.41■□□□□ 0.38
SYNE3-203ENST00000554873 HELBQ8NG08 1087 aaPredicted RBP17.41■□□□□ 0.38
SYNE3-203ENST00000554873 THOC1Q96FV9 657 aaKnown RBP17.41■□□□□ 0.38
SYNE3-203ENST00000554873 FOXP1Q9H334 677 aaPredicted RBP17.41■□□□□ 0.38
SYNE3-203ENST00000554873 ASAP1Q9ULH1 1129 aa17.41■□□□□ 0.38
SYNE3-203ENST00000554873 PAPPAQ13219 1627 aa17.41■□□□□ 0.38
SYNE3-203ENST00000554873 MBD4O95243 580 aa17.41■□□□□ 0.38
SYNE3-203ENST00000554873 ANKRD20A8PQ5CZ79 823 aa17.41■□□□□ 0.38
SYNE3-203ENST00000554873 AKNAD1Q5T1N1 836 aa17.41■□□□□ 0.38
SYNE3-203ENST00000554873 CAPRIN2Q6IMN6 1127 aaKnown RBP17.41■□□□□ 0.38
SYNE3-203ENST00000554873 MAGEB6Q8N7X4 407 aa17.41■□□□□ 0.38
SYNE3-203ENST00000554873 TSEN2Q8NCE0 465 aaKnown RBP17.41■□□□□ 0.38
SYNE3-203ENST00000554873 SPDYE1Q8NFV5 336 aaPredicted RBP17.41■□□□□ 0.38
SYNE3-203ENST00000554873 ARMT1Q9H993 441 aa17.41■□□□□ 0.38
SYNE3-203ENST00000554873 IRS4O14654 1257 aaPredicted RBP17.4■□□□□ 0.38
SYNE3-203ENST00000554873 ACTN4O43707 911 aaKnown RBP17.4■□□□□ 0.38
SYNE3-203ENST00000554873 CAND2O75155 1236 aa17.4■□□□□ 0.38
SYNE3-203ENST00000554873 UQCRFS1P1P0C7P4 283 aa17.4■□□□□ 0.38
SYNE3-203ENST00000554873 SEC24CP53992 1094 aa17.4■□□□□ 0.38
SYNE3-203ENST00000554873 ACCSLQ4AC99 568 aa17.4■□□□□ 0.38
SYNE3-203ENST00000554873 KCTD16Q68DU8 428 aa17.4■□□□□ 0.38
SYNE3-203ENST00000554873 HOMEZQ8IX15 550 aa17.4■□□□□ 0.38
SYNE3-203ENST00000554873 EBF2Q9HAK2 575 aa17.4■□□□□ 0.38
SYNE3-203ENST00000554873 TRIM10Q9UDY6 481 aa17.4■□□□□ 0.38
SYNE3-203ENST00000554873 SRPRBQ9Y5M8 271 aaKnown RBP17.4■□□□□ 0.38
SYNE3-203ENST00000554873 GSG1L2A8MUP6 293 aa17.4■□□□□ 0.38
SYNE3-203ENST00000554873 DNM1LO00429 736 aa17.4■□□□□ 0.38
SYNE3-203ENST00000554873 PRKAB2O43741 272 aa17.4■□□□□ 0.38
SYNE3-203ENST00000554873 MDH1P40925 334 aaKnown RBP17.4■□□□□ 0.38
SYNE3-203ENST00000554873 APBA1Q02410 837 aa17.4■□□□□ 0.38
SYNE3-203ENST00000554873 RTN1Q16799 776 aa17.4■□□□□ 0.38
SYNE3-203ENST00000554873 SLC5A9Q2M3M2 681 aa17.4■□□□□ 0.38
SYNE3-203ENST00000554873 RRP12Q5JTH9 1297 aaKnown RBP17.4■□□□□ 0.38
SYNE3-203ENST00000554873 MFSD6Q6ZSS7 791 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms