RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 DYRK3O43781 588 aa7.96□□□□□ -1.14
SCFD1-212ENST00000554486 RPS6KA4O75676 772 aa7.96□□□□□ -1.14
SCFD1-212ENST00000554486 ECEL1O95672 775 aa7.96□□□□□ -1.14
SCFD1-212ENST00000554486 CTSBP07858 339 aa7.96□□□□□ -1.14
SCFD1-212ENST00000554486 TRIM27P14373 513 aa7.96□□□□□ -1.14
SCFD1-212ENST00000554486 IL6STP40189 918 aaPredicted RBP7.96□□□□□ -1.14
SCFD1-212ENST00000554486 C20orf194Q5TEA3 1177 aa7.96□□□□□ -1.14
SCFD1-212ENST00000554486 TTLL7Q6ZT98 887 aa7.96□□□□□ -1.14
SCFD1-212ENST00000554486 SMIM5Q71RC9 77 aa7.96□□□□□ -1.14
SCFD1-212ENST00000554486 COPS6Q7L5N1 327 aa7.96□□□□□ -1.14
SCFD1-212ENST00000554486 METTL16Q86W50 562 aaKnown RBP7.96□□□□□ -1.14
SCFD1-212ENST00000554486 ARHGAP45Q92619 1136 aa7.96□□□□□ -1.14
SCFD1-212ENST00000554486 FRAT1Q92837 279 aaPredicted RBP7.96□□□□□ -1.14
SCFD1-212ENST00000554486 SSBP4Q9BWG4 385 aaPredicted RBP7.96□□□□□ -1.14
SCFD1-212ENST00000554486 OSGEPQ9NPF4 335 aa7.96□□□□□ -1.14
SCFD1-212ENST00000554486 TMEM39AQ9NV64 488 aa7.96□□□□□ -1.14
SCFD1-212ENST00000554486 PTPRCP08575 1304 aa7.96□□□□□ -1.14
SCFD1-212ENST00000554486 ADCY9O60503 1353 aa7.96□□□□□ -1.14
SCFD1-212ENST00000554486 ARFGEF2Q9Y6D5 1785 aa7.95□□□□□ -1.14
SCFD1-212ENST00000554486 F6X3S4 739 aa7.95□□□□□ -1.14
SCFD1-212ENST00000554486 F8W735 103 aaPredicted RBP7.95□□□□□ -1.14
SCFD1-212ENST00000554486 IPO8O15397 1037 aaKnown RBP7.95□□□□□ -1.14
SCFD1-212ENST00000554486 RLBP1P12271 317 aa7.95□□□□□ -1.14
SCFD1-212ENST00000554486 BMP6P22004 513 aa7.95□□□□□ -1.14
SCFD1-212ENST00000554486 C19orf57Q0VDD7 668 aa7.95□□□□□ -1.14
SCFD1-212ENST00000554486 AIMP1Q12904 312 aaKnown RBP7.95□□□□□ -1.14
SCFD1-212ENST00000554486 ZNF827Q17R98 1081 aa7.95□□□□□ -1.14
SCFD1-212ENST00000554486 ZKSCAN2Q63HK3 967 aa7.95□□□□□ -1.14
SCFD1-212ENST00000554486 ATF7IPQ6VMQ6 1270 aa7.95□□□□□ -1.14
SCFD1-212ENST00000554486 SV2BQ7L1I2 683 aa7.95□□□□□ -1.14
SCFD1-212ENST00000554486 PDZD3Q86UT5 571 aa7.95□□□□□ -1.14
SCFD1-212ENST00000554486 ABCC4O15439 1325 aa7.95□□□□□ -1.14
SCFD1-212ENST00000554486 C4AP0C0L4 1744 aa7.95□□□□□ -1.14
SCFD1-212ENST00000554486 N4BP2Q86UW6 1770 aaPredicted RBP7.94□□□□□ -1.14
SCFD1-212ENST00000554486 NUP98P52948 1817 aa7.94□□□□□ -1.14
SCFD1-212ENST00000554486 PI4KAP2A4QPH2 592 aa7.94□□□□□ -1.14
SCFD1-212ENST00000554486 DLGAP3O95886 979 aa7.94□□□□□ -1.14
SCFD1-212ENST00000554486 HDLBPQ00341 1268 aaKnown RBP7.94□□□□□ -1.14
SCFD1-212ENST00000554486 GSTM4Q03013 218 aa7.94□□□□□ -1.14
SCFD1-212ENST00000554486 PDE3AQ14432 1141 aa7.94□□□□□ -1.14
SCFD1-212ENST00000554486 CCDC85BQ15834 202 aaPredicted RBP7.94□□□□□ -1.14
SCFD1-212ENST00000554486 DUOXA2Q1HG44 320 aa7.94□□□□□ -1.14
SCFD1-212ENST00000554486 KSR2Q6VAB6 950 aa7.94□□□□□ -1.14
SCFD1-212ENST00000554486 ERMP1Q7Z2K6 904 aa7.94□□□□□ -1.14
SCFD1-212ENST00000554486 PI4KAP1Q8N8J0 262 aa7.94□□□□□ -1.14
SCFD1-212ENST00000554486 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.94□□□□□ -1.14
SCFD1-212ENST00000554486 PLBD2Q8NHP8 589 aa7.94□□□□□ -1.14
SCFD1-212ENST00000554486 PANK1Q8TE04 598 aa7.94□□□□□ -1.14
SCFD1-212ENST00000554486 NOC4LQ9BVI4 516 aaKnown RBP7.94□□□□□ -1.14
SCFD1-212ENST00000554486 API5Q9BZZ5 524 aaKnown RBP7.94□□□□□ -1.14
SCFD1-212ENST00000554486 COPRSQ9NQ92 184 aa7.94□□□□□ -1.14
SCFD1-212ENST00000554486 GPN3Q9UHW5 284 aaPredicted RBP7.94□□□□□ -1.14
SCFD1-212ENST00000554486 MAP3K15Q6ZN16 1313 aa7.94□□□□□ -1.14
SCFD1-212ENST00000554486 COL15A1P39059 1388 aa7.94□□□□□ -1.14
SCFD1-212ENST00000554486 BCORQ6W2J9 1755 aa7.94□□□□□ -1.14
SCFD1-212ENST00000554486 QSER1Q2KHR3 1735 aa7.93□□□□□ -1.14
SCFD1-212ENST00000554486 SCAMP3O14828 347 aaKnown RBP7.93□□□□□ -1.14
SCFD1-212ENST00000554486 EIF4EBP3O60516 100 aaPredicted RBP7.93□□□□□ -1.14
SCFD1-212ENST00000554486 CAMTA2O94983 1202 aa7.93□□□□□ -1.14
SCFD1-212ENST00000554486 ALX3O95076 343 aa7.93□□□□□ -1.14
SCFD1-212ENST00000554486 WISP1O95388 367 aa7.93□□□□□ -1.14
SCFD1-212ENST00000554486 DDX58O95786 925 aaKnown RBP7.93□□□□□ -1.14
SCFD1-212ENST00000554486 DZIP1LQ8IYY4 767 aaKnown RBP7.93□□□□□ -1.14
SCFD1-212ENST00000554486 DNAAF4Q8WXU2 420 aa7.93□□□□□ -1.14
SCFD1-212ENST00000554486 CEP41Q9BYV8 373 aa7.93□□□□□ -1.14
SCFD1-212ENST00000554486 CEP44Q9C0F1 390 aa7.93□□□□□ -1.14
SCFD1-212ENST00000554486 MAP3K2Q9Y2U5 619 aa7.93□□□□□ -1.14
SCFD1-212ENST00000554486 SCN7AQ01118 1682 aa7.92□□□□□ -1.14
SCFD1-212ENST00000554486 A0A087WZG4 1122 aa7.92□□□□□ -1.14
SCFD1-212ENST00000554486 ERVV-1B6SEH8 477 aa7.92□□□□□ -1.14
SCFD1-212ENST00000554486 GLB1P16278 677 aa7.92□□□□□ -1.14
SCFD1-212ENST00000554486 HMGB2P26583 209 aaKnown RBP7.92□□□□□ -1.14
SCFD1-212ENST00000554486 NLRP12P59046 1061 aa7.92□□□□□ -1.14
SCFD1-212ENST00000554486 IRX6P78412 446 aaPredicted RBP7.92□□□□□ -1.14
SCFD1-212ENST00000554486 HLFQ16534 295 aa7.92□□□□□ -1.14
SCFD1-212ENST00000554486 C9orf131Q5VYM1 1079 aa7.92□□□□□ -1.14
SCFD1-212ENST00000554486 KIF6Q6ZMV9 814 aa7.92□□□□□ -1.14
SCFD1-212ENST00000554486 ACAD11Q709F0 780 aa7.92□□□□□ -1.14
SCFD1-212ENST00000554486 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.92□□□□□ -1.14
SCFD1-212ENST00000554486 TMEM57Q8N5G2 664 aa7.92□□□□□ -1.14
SCFD1-212ENST00000554486 GRIN3AQ8TCU5 1115 aa7.92□□□□□ -1.14
SCFD1-212ENST00000554486 MEGF10Q96KG7 1140 aa7.92□□□□□ -1.14
SCFD1-212ENST00000554486 METTL22Q9BUU2 404 aaPredicted RBP7.92□□□□□ -1.14
SCFD1-212ENST00000554486 METTL5Q9NRN9 209 aaKnown RBP7.92□□□□□ -1.14
SCFD1-212ENST00000554486 SRP68Q9UHB9 627 aaKnown RBP7.92□□□□□ -1.14
SCFD1-212ENST00000554486 PXDNLA1KZ92 1463 aa7.92□□□□□ -1.14
SCFD1-212ENST00000554486 ANKRD36CQ5JPF3 1778 aa7.92□□□□□ -1.14
SCFD1-212ENST00000554486 AFDNP55196 1824 aaKnown RBP7.92□□□□□ -1.14
SCFD1-212ENST00000554486 IGKV5-2P06315 115 aa7.91□□□□□ -1.14
SCFD1-212ENST00000554486 NME2P22392 152 aa7.91□□□□□ -1.14
SCFD1-212ENST00000554486 ZNF76P36508 570 aa7.91□□□□□ -1.14
SCFD1-212ENST00000554486 ZNF252P-AS1Q0IIN9 211 aa7.91□□□□□ -1.14
SCFD1-212ENST00000554486 SLC15A2Q16348 729 aa7.91□□□□□ -1.14
SCFD1-212ENST00000554486 BEND3Q5T5X7 828 aa7.91□□□□□ -1.14
SCFD1-212ENST00000554486 INTS3Q68E01 1043 aaKnown RBP7.91□□□□□ -1.14
SCFD1-212ENST00000554486 SLC4A10Q6U841 1118 aa7.91□□□□□ -1.14
SCFD1-212ENST00000554486 SULF2Q8IWU5 870 aa7.91□□□□□ -1.14
SCFD1-212ENST00000554486 FTSJ3Q8IY81 847 aaKnown RBP7.91□□□□□ -1.14
SCFD1-212ENST00000554486 UBASH3BQ8TF42 649 aa7.91□□□□□ -1.14
SCFD1-212ENST00000554486 CRBNQ96SW2 442 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms