RNA–Protein interactions for RNA: ENST00000554384.1

CHD8-207, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-207ENST00000554384 ATP13A1Q9HD20 1204 aa7.52□□□□□ -1.21
CHD8-207ENST00000554384 TRBV23-1A0A0A0MS06 115 aa7.51□□□□□ -1.21
CHD8-207ENST00000554384 GSC2O15499 205 aa7.51□□□□□ -1.21
CHD8-207ENST00000554384 MED26O95402 600 aa7.51□□□□□ -1.21
CHD8-207ENST00000554384 FOSL1P15407 271 aa7.51□□□□□ -1.21
CHD8-207ENST00000554384 ECI1P42126 302 aa7.51□□□□□ -1.21
CHD8-207ENST00000554384 KCNJ6P48051 423 aa7.51□□□□□ -1.21
CHD8-207ENST00000554384 PLEKHG4Q58EX7 1191 aa7.51□□□□□ -1.21
CHD8-207ENST00000554384 TMEM67Q5HYA8 995 aa7.51□□□□□ -1.21
CHD8-207ENST00000554384 MCTP1Q6DN14 999 aa7.51□□□□□ -1.21
CHD8-207ENST00000554384 DENND5AQ6IQ26 1287 aa7.51□□□□□ -1.21
CHD8-207ENST00000554384 ZPBP2Q6X784 338 aa7.51□□□□□ -1.21
CHD8-207ENST00000554384 C16orf86Q6ZW13 317 aa7.51□□□□□ -1.21
CHD8-207ENST00000554384 TSPYL5Q86VY4 417 aaPredicted RBP7.51□□□□□ -1.21
CHD8-207ENST00000554384 DAGLBQ8NCG7 672 aa7.51□□□□□ -1.21
CHD8-207ENST00000554384 KISS1RQ969F8 398 aaPredicted RBP7.51□□□□□ -1.21
CHD8-207ENST00000554384 DHRS4Q9BTZ2 278 aa7.51□□□□□ -1.21
CHD8-207ENST00000554384 FOXP3Q9BZS1 431 aa7.51□□□□□ -1.21
CHD8-207ENST00000554384 GPRC5CQ9NQ84 441 aa7.51□□□□□ -1.21
CHD8-207ENST00000554384 GPATCH2Q9NW75 528 aa7.51□□□□□ -1.21
CHD8-207ENST00000554384 SF3B6Q9Y3B4 125 aaKnown RBP7.51□□□□□ -1.21
CHD8-207ENST00000554384 MRPS23Q9Y3D9 190 aaKnown RBP7.51□□□□□ -1.21
CHD8-207ENST00000554384 FKTNO75072 461 aa7.5□□□□□ -1.21
CHD8-207ENST00000554384 RAPGEF3O95398 923 aa7.5□□□□□ -1.21
CHD8-207ENST00000554384 SYPP08247 313 aa7.5□□□□□ -1.21
CHD8-207ENST00000554384 SNRPB2P08579 225 aaKnown RBP7.5□□□□□ -1.21
CHD8-207ENST00000554384 FGFR1P11362 822 aa7.5□□□□□ -1.21
CHD8-207ENST00000554384 VAV1P15498 845 aa7.5□□□□□ -1.21
CHD8-207ENST00000554384 CD97P48960 835 aa7.5□□□□□ -1.21
CHD8-207ENST00000554384 GYS2P54840 703 aa7.5□□□□□ -1.21
CHD8-207ENST00000554384 AMPD2Q01433 879 aa7.5□□□□□ -1.21
CHD8-207ENST00000554384 SCRN1Q12765 414 aa7.5□□□□□ -1.21
CHD8-207ENST00000554384 BNIP3Q12983 259 aa7.5□□□□□ -1.21
CHD8-207ENST00000554384 LCE1DQ5T752 114 aa7.5□□□□□ -1.21
CHD8-207ENST00000554384 SLC51AQ86UW1 340 aa7.5□□□□□ -1.21
CHD8-207ENST00000554384 TMEM145Q8NBT3 493 aa7.5□□□□□ -1.21
CHD8-207ENST00000554384 NETO1Q8TDF5 533 aa7.5□□□□□ -1.21
CHD8-207ENST00000554384 FCRL3Q96P31 734 aaPredicted RBP7.5□□□□□ -1.21
CHD8-207ENST00000554384 NKX2-4Q9H2Z4 354 aa7.5□□□□□ -1.21
CHD8-207ENST00000554384 PRR13Q9NZ81 148 aa7.5□□□□□ -1.21
CHD8-207ENST00000554384 ANKRD62A6NC57 917 aa7.49□□□□□ -1.21
CHD8-207ENST00000554384 ARNTLO00327 626 aa7.49□□□□□ -1.21
CHD8-207ENST00000554384 GSNP06396 782 aa7.49□□□□□ -1.21
CHD8-207ENST00000554384 GFRA1P56159 465 aa7.49□□□□□ -1.21
CHD8-207ENST00000554384 NTRK3Q16288 839 aa7.49□□□□□ -1.21
CHD8-207ENST00000554384 IFI16Q16666 785 aaKnown RBP7.49□□□□□ -1.21
CHD8-207ENST00000554384 LONRF2Q1L5Z9 754 aa7.49□□□□□ -1.21
CHD8-207ENST00000554384 GAB4Q2WGN9 574 aa7.49□□□□□ -1.21
CHD8-207ENST00000554384 CWF19L1Q69YN2 538 aaKnown RBP7.49□□□□□ -1.21
CHD8-207ENST00000554384 POMZP3Q6PJE2 187 aa7.49□□□□□ -1.21
CHD8-207ENST00000554384 KIAA0907Q7Z7F0 614 aaPredicted RBP7.49□□□□□ -1.21
CHD8-207ENST00000554384 CREG2Q8IUH2 290 aa7.49□□□□□ -1.21
CHD8-207ENST00000554384 SCUBE1Q8IWY4 988 aa7.49□□□□□ -1.21
CHD8-207ENST00000554384 ZNF655Q8N720 491 aaPredicted RBP7.49□□□□□ -1.21
CHD8-207ENST00000554384 ENOX1Q8TC92 643 aaKnown RBP7.49□□□□□ -1.21
CHD8-207ENST00000554384 CLUHP3Q96NS8 147 aa7.49□□□□□ -1.21
CHD8-207ENST00000554384 SLC26A8Q96RN1 970 aa7.49□□□□□ -1.21
CHD8-207ENST00000554384 SLC12A9Q9BXP2 914 aa7.49□□□□□ -1.21
CHD8-207ENST00000554384 MKNK2Q9HBH9 465 aa7.49□□□□□ -1.21
CHD8-207ENST00000554384 PCDHA11Q9Y5I1 949 aa7.49□□□□□ -1.21
CHD8-207ENST00000554384 PITPNM2Q9BZ72 1349 aa7.49□□□□□ -1.21
CHD8-207ENST00000554384 ESR1P03372 595 aa7.48□□□□□ -1.21
CHD8-207ENST00000554384 GSTM1P09488 218 aa7.48□□□□□ -1.21
CHD8-207ENST00000554384 GRB10Q13322 594 aa7.48□□□□□ -1.21
CHD8-207ENST00000554384 RTP2Q5QGT7 225 aa7.48□□□□□ -1.21
CHD8-207ENST00000554384 TRIT1Q9H3H1 467 aaKnown RBP7.48□□□□□ -1.21
CHD8-207ENST00000554384 DUSP13Q9UII6 198 aa7.48□□□□□ -1.21
CHD8-207ENST00000554384 TMEM265A0A087WTH1 108 aa7.47□□□□□ -1.21
CHD8-207ENST00000554384 C2orf71A6NGG8 1288 aa7.47□□□□□ -1.21
CHD8-207ENST00000554384 AURKAO14965 403 aa7.47□□□□□ -1.21
CHD8-207ENST00000554384 CLCN7P51798 805 aa7.47□□□□□ -1.21
CHD8-207ENST00000554384 POU4F1Q01851 419 aa7.47□□□□□ -1.21
CHD8-207ENST00000554384 AOC3Q16853 763 aa7.47□□□□□ -1.21
CHD8-207ENST00000554384 DHX37Q8IY37 1157 aaKnown RBP7.47□□□□□ -1.21
CHD8-207ENST00000554384 CRACR2BQ8N4Y2 399 aaPredicted RBP7.47□□□□□ -1.21
CHD8-207ENST00000554384 KREMEN2Q8NCW0 462 aa7.47□□□□□ -1.21
CHD8-207ENST00000554384 C1orf159Q96HA4 380 aa7.47□□□□□ -1.21
CHD8-207ENST00000554384 NCOA5Q9HCD5 579 aaKnown RBP7.47□□□□□ -1.21
CHD8-207ENST00000554384 CYP26B1Q9NR63 512 aa7.47□□□□□ -1.21
CHD8-207ENST00000554384 AP5S1Q9NUS5 200 aa7.47□□□□□ -1.21
CHD8-207ENST00000554384 TMEFF2Q9UIK5 374 aaPredicted RBP7.47□□□□□ -1.21
CHD8-207ENST00000554384 TCFL5Q9UL49 500 aa7.47□□□□□ -1.21
CHD8-207ENST00000554384 THBDP07204 575 aa7.46□□□□□ -1.22
CHD8-207ENST00000554384 C6orf222P0C671 652 aaPredicted RBP7.46□□□□□ -1.22
CHD8-207ENST00000554384 LTKP29376 864 aa7.46□□□□□ -1.22
CHD8-207ENST00000554384 HOXC12P31275 282 aa7.46□□□□□ -1.22
CHD8-207ENST00000554384 BMP8BP34820 402 aa7.46□□□□□ -1.22
CHD8-207ENST00000554384 TCEA2Q15560 299 aa7.46□□□□□ -1.22
CHD8-207ENST00000554384 DALRD3Q5D0E6 543 aaKnown RBP7.46□□□□□ -1.22
CHD8-207ENST00000554384 LINC00116Q8NCU8 138 aa7.46□□□□□ -1.22
CHD8-207ENST00000554384 FRS2Q8WU20 508 aa7.46□□□□□ -1.22
CHD8-207ENST00000554384 IPO9Q96P70 1041 aaKnown RBP7.46□□□□□ -1.22
CHD8-207ENST00000554384 CLEC1BQ9P126 229 aa7.46□□□□□ -1.22
CHD8-207ENST00000554384 ASXL2Q76L83 1435 aa7.45□□□□□ -1.22
CHD8-207ENST00000554384 SSU72P8A0A1W2PR75 194 aa7.45□□□□□ -1.22
CHD8-207ENST00000554384 IRS4O14654 1257 aaPredicted RBP7.45□□□□□ -1.22
CHD8-207ENST00000554384 ZNF205O95201 554 aa7.45□□□□□ -1.22
CHD8-207ENST00000554384 CANXP27824 592 aaKnown RBP7.45□□□□□ -1.22
CHD8-207ENST00000554384 EGR3Q06889 387 aa7.45□□□□□ -1.22
CHD8-207ENST00000554384 MSMPQ1L6U9 139 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms