RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 KIAA1755Q5JYT7 1200 aa20.47■□□□□ 0.87
NEK9-204ENST00000554258 AGBL1Q96MI9 1066 aa20.47■□□□□ 0.87
NEK9-204ENST00000554258 COPRSQ9NQ92 184 aa20.47■□□□□ 0.87
NEK9-204ENST00000554258 UBTFL1P0CB47 393 aaPredicted RBP20.46■□□□□ 0.87
NEK9-204ENST00000554258 RLBP1P12271 317 aa20.46■□□□□ 0.87
NEK9-204ENST00000554258 SHMT1P34896 483 aa20.46■□□□□ 0.87
NEK9-204ENST00000554258 USP5P45974 858 aa20.46■□□□□ 0.87
NEK9-204ENST00000554258 DYNLL1P63167 89 aaKnown RBP20.46■□□□□ 0.87
NEK9-204ENST00000554258 BEX3Q00994 111 aa20.46■□□□□ 0.87
NEK9-204ENST00000554258 MAMDC4Q6UXC1 1216 aa20.46■□□□□ 0.87
NEK9-204ENST00000554258 TTC6Q86TZ1 520 aa20.46■□□□□ 0.87
NEK9-204ENST00000554258 SPICE1Q8N0Z3 855 aa20.46■□□□□ 0.87
NEK9-204ENST00000554258 PRRX2Q99811 253 aa20.46■□□□□ 0.87
NEK9-204ENST00000554258 MPHOSPH10O00566 681 aaKnown RBP20.45■□□□□ 0.86
NEK9-204ENST00000554258 CTAGE5O15320 804 aa20.45■□□□□ 0.86
NEK9-204ENST00000554258 CABYRO75952 493 aa20.45■□□□□ 0.86
NEK9-204ENST00000554258 STAT3P40763 770 aa20.45■□□□□ 0.86
NEK9-204ENST00000554258 IER5LQ5T953 404 aa20.45■□□□□ 0.86
NEK9-204ENST00000554258 SEZ6LQ9BYH1 1024 aa20.45■□□□□ 0.86
NEK9-204ENST00000554258 SUPT16HQ9Y5B9 1047 aaKnown RBP20.45■□□□□ 0.86
NEK9-204ENST00000554258 COPB2P35606 906 aa20.44■□□□□ 0.86
NEK9-204ENST00000554258 ZP2Q05996 745 aa20.44■□□□□ 0.86
NEK9-204ENST00000554258 ERMP1Q7Z2K6 904 aa20.44■□□□□ 0.86
NEK9-204ENST00000554258 CLUAP1Q96AJ1 413 aa20.44■□□□□ 0.86
NEK9-204ENST00000554258 DDX11Q96FC9 970 aa20.44■□□□□ 0.86
NEK9-204ENST00000554258 UPF3BQ9BZI7 483 aaKnown RBP20.44■□□□□ 0.86
NEK9-204ENST00000554258 ABHD16BQ9H3Z7 469 aa20.44■□□□□ 0.86
NEK9-204ENST00000554258 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.44■□□□□ 0.86
NEK9-204ENST00000554258 MYO15AQ9UKN7 3530 aa20.44■□□□□ 0.86
NEK9-204ENST00000554258 PTPRSQ13332 1948 aa20.43■□□□□ 0.86
NEK9-204ENST00000554258 UQCRFS1P1P0C7P4 283 aa20.43■□□□□ 0.86
NEK9-204ENST00000554258 TMEM57Q8N5G2 664 aa20.43■□□□□ 0.86
NEK9-204ENST00000554258 TET1Q8NFU7 2136 aa20.43■□□□□ 0.86
NEK9-204ENST00000554258 SNRKQ9NRH2 765 aa20.43■□□□□ 0.86
NEK9-204ENST00000554258 FAM50BQ9Y247 325 aa20.43■□□□□ 0.86
NEK9-204ENST00000554258 GRIN2DO15399 1336 aa20.43■□□□□ 0.86
NEK9-204ENST00000554258 EPG5Q9HCE0 2579 aa20.42■□□□□ 0.86
NEK9-204ENST00000554258 H3BQ06 376 aaPredicted RBP20.42■□□□□ 0.86
NEK9-204ENST00000554258 C20orf194Q5TEA3 1177 aa20.42■□□□□ 0.86
NEK9-204ENST00000554258 PANK1Q8TE04 598 aa20.42■□□□□ 0.86
NEK9-204ENST00000554258 FAM86C1Q9NVL1 165 aa20.42■□□□□ 0.86
NEK9-204ENST00000554258 PRKAG3Q9UGI9 489 aa20.42■□□□□ 0.86
NEK9-204ENST00000554258 MTUS1Q9ULD2 1270 aa20.42■□□□□ 0.86
NEK9-204ENST00000554258 SIP14410 1827 aa20.41■□□□□ 0.86
NEK9-204ENST00000554258 MYH8P13535 1937 aa20.41■□□□□ 0.86
NEK9-204ENST00000554258 LCHNA4D1U4 455 aa20.41■□□□□ 0.86
NEK9-204ENST00000554258 NKX3-2P78367 333 aa20.41■□□□□ 0.86
NEK9-204ENST00000554258 TCF15Q12870 199 aa20.41■□□□□ 0.86
NEK9-204ENST00000554258 NOL8Q76FK4 1167 aaKnown RBP20.41■□□□□ 0.86
NEK9-204ENST00000554258 ZNF467Q7Z7K2 595 aaPredicted RBP20.41■□□□□ 0.86
NEK9-204ENST00000554258 FTSJ3Q8IY81 847 aaKnown RBP20.41■□□□□ 0.86
NEK9-204ENST00000554258 SUGCTQ9HAC7 445 aa20.41■□□□□ 0.86
NEK9-204ENST00000554258 ADAMTS5Q9UNA0 930 aa20.41■□□□□ 0.86
NEK9-204ENST00000554258 WDR46O15213 610 aaKnown RBP20.4■□□□□ 0.86
NEK9-204ENST00000554258 NEK9Q8TD19 979 aa20.4■□□□□ 0.86
NEK9-204ENST00000554258 FTOQ9C0B1 505 aaKnown RBP eCLIP20.4■□□□□ 0.86
NEK9-204ENST00000554258 ZNF214Q9UL59 606 aaPredicted RBP20.4■□□□□ 0.86
NEK9-204ENST00000554258 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.4■□□□□ 0.86
NEK9-204ENST00000554258 C19orf67A6NJJ6 358 aa20.39■□□□□ 0.85
NEK9-204ENST00000554258 VWA5AO00534 786 aa20.39■□□□□ 0.85
NEK9-204ENST00000554258 CYP2C9P11712 490 aa20.39■□□□□ 0.85
NEK9-204ENST00000554258 PLCD1P51178 756 aa20.39■□□□□ 0.85
NEK9-204ENST00000554258 PSMC6P62333 389 aa20.39■□□□□ 0.85
NEK9-204ENST00000554258 FSCN1Q16658 493 aaKnown RBP20.39■□□□□ 0.85
NEK9-204ENST00000554258 ADHFE1Q8IWW8 467 aa20.39■□□□□ 0.85
NEK9-204ENST00000554258 ZBED2Q9BTP6 218 aa20.39■□□□□ 0.85
NEK9-204ENST00000554258 SH2D4AQ9H788 454 aa20.39■□□□□ 0.85
NEK9-204ENST00000554258 VCPKMTQ9H867 229 aa20.39■□□□□ 0.85
NEK9-204ENST00000554258 ARHGEF10LQ9HCE6 1279 aa20.39■□□□□ 0.85
NEK9-204ENST00000554258 FBXO28Q9NVF7 368 aa20.39■□□□□ 0.85
NEK9-204ENST00000554258 MUTYHQ9UIF7 546 aa20.39■□□□□ 0.85
NEK9-204ENST00000554258 DNAJC25-GNG10A0A024R161 153 aa20.38■□□□□ 0.85
NEK9-204ENST00000554258 CYP7A1P22680 504 aa20.38■□□□□ 0.85
NEK9-204ENST00000554258 RFC2P35250 354 aa20.38■□□□□ 0.85
NEK9-204ENST00000554258 IRS1P35568 1242 aa20.38■□□□□ 0.85
NEK9-204ENST00000554258 SUGP1Q8IWZ8 645 aaKnown RBP20.38■□□□□ 0.85
NEK9-204ENST00000554258 MIGA1Q8NAN2 632 aa20.38■□□□□ 0.85
NEK9-204ENST00000554258 ALDH8A1Q9H2A2 487 aaPredicted RBP20.38■□□□□ 0.85
NEK9-204ENST00000554258 TANC1Q9C0D5 1861 aa20.38■□□□□ 0.85
NEK9-204ENST00000554258 KMT2EQ8IZD2 1858 aa20.37■□□□□ 0.85
NEK9-204ENST00000554258 ASTN1O14525 1302 aa20.37■□□□□ 0.85
NEK9-204ENST00000554258 ZEB2O60315 1214 aa20.37■□□□□ 0.85
NEK9-204ENST00000554258 SUPT20HL2P0C7V6 817 aa20.37■□□□□ 0.85
NEK9-204ENST00000554258 KCNJ6P48051 423 aa20.37■□□□□ 0.85
NEK9-204ENST00000554258 TNFAIP2Q03169 654 aa20.37■□□□□ 0.85
NEK9-204ENST00000554258 PKN1Q16512 942 aa20.37■□□□□ 0.85
NEK9-204ENST00000554258 HERC4Q5GLZ8 1057 aaPredicted RBP20.37■□□□□ 0.85
NEK9-204ENST00000554258 TMEM179Q6ZVK1 233 aa20.37■□□□□ 0.85
NEK9-204ENST00000554258 BMP8AQ7Z5Y6 402 aa20.37■□□□□ 0.85
NEK9-204ENST00000554258 CERS3Q8IU89 383 aa20.37■□□□□ 0.85
NEK9-204ENST00000554258 TGS1Q96RS0 853 aaKnown RBP20.37■□□□□ 0.85
NEK9-204ENST00000554258 TMX2Q9Y320 296 aa20.37■□□□□ 0.85
NEK9-204ENST00000554258 NAV1Q8NEY1 1877 aa20.37■□□□□ 0.85
NEK9-204ENST00000554258 POLR3DP05423 398 aaPredicted RBP20.36■□□□□ 0.85
NEK9-204ENST00000554258 EP400NLQ6ZTU2 488 aa20.36■□□□□ 0.85
NEK9-204ENST00000554258 ARMCX2Q7L311 632 aa20.36■□□□□ 0.85
NEK9-204ENST00000554258 TLK2Q86UE8 772 aa20.36■□□□□ 0.85
NEK9-204ENST00000554258 CLEC10AQ8IUN9 316 aa20.36■□□□□ 0.85
NEK9-204ENST00000554258 MAGEB6Q8N7X4 407 aa20.36■□□□□ 0.85
NEK9-204ENST00000554258 PBXIP1Q96AQ6 731 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms