RNA–Protein interactions for RNA: ENST00000554227.6

SNRPN-207, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

TSL 5 BASIC

Gene SNRPN, Length 1,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-207ENST00000554227 CNKSR2Q8WXI2 1034 aa21.92■■□□□ 1.1
SNRPN-207ENST00000554227 KIFC2Q96AC6 838 aa21.92■■□□□ 1.1
SNRPN-207ENST00000554227 hCG_1984214I3L0E3 225 aa21.92■■□□□ 1.1
SNRPN-207ENST00000554227 BACE1P56817 501 aa21.92■■□□□ 1.1
SNRPN-207ENST00000554227 PTPAQ15257 358 aa21.92■■□□□ 1.1
SNRPN-207ENST00000554227 RILPL1Q5EBL4 403 aa21.92■■□□□ 1.1
SNRPN-207ENST00000554227 CAVIN1Q6NZI2 390 aaKnown RBP21.92■■□□□ 1.1
SNRPN-207ENST00000554227 ZNF713Q8N859 430 aaPredicted RBP21.92■■□□□ 1.1
SNRPN-207ENST00000554227 C6orf50Q9HD87 102 aa21.92■■□□□ 1.1
SNRPN-207ENST00000554227 TRAF5O00463 557 aa21.91■■□□□ 1.1
SNRPN-207ENST00000554227 SPTLC2O15270 562 aa21.91■■□□□ 1.1
SNRPN-207ENST00000554227 YEATS4O95619 227 aa21.91■■□□□ 1.1
SNRPN-207ENST00000554227 MARCKSP29966 332 aaPredicted RBP21.91■■□□□ 1.1
SNRPN-207ENST00000554227 ME1P48163 572 aa21.91■■□□□ 1.1
SNRPN-207ENST00000554227 SLC39A14Q15043 492 aa21.91■■□□□ 1.1
SNRPN-207ENST00000554227 AS3MTQ9HBK9 375 aa21.91■■□□□ 1.1
SNRPN-207ENST00000554227 TMEM260Q9NX78 707 aa21.91■■□□□ 1.1
SNRPN-207ENST00000554227 BIN2Q9UBW5 565 aaPredicted RBP21.91■■□□□ 1.1
SNRPN-207ENST00000554227 PCDHA7Q9UN72 937 aa21.91■■□□□ 1.1
SNRPN-207ENST00000554227 PCDHA1Q9Y5I3 950 aa21.91■■□□□ 1.1
SNRPN-207ENST00000554227 MBD3O95983 291 aa21.9■■□□□ 1.1
SNRPN-207ENST00000554227 VCAM1P19320 739 aa21.9■■□□□ 1.1
SNRPN-207ENST00000554227 TTLL12Q14166 644 aaPredicted RBP21.9■■□□□ 1.1
SNRPN-207ENST00000554227 USH1GQ495M9 461 aa21.9■■□□□ 1.1
SNRPN-207ENST00000554227 GALNT17Q6IS24 598 aa21.9■■□□□ 1.1
SNRPN-207ENST00000554227 CHURC1Q8WUH1 139 aa21.9■■□□□ 1.1
SNRPN-207ENST00000554227 CLMNQ96JQ2 1002 aa21.9■■□□□ 1.1
SNRPN-207ENST00000554227 GNA11P29992 359 aa21.89■■□□□ 1.1
SNRPN-207ENST00000554227 HMGCS2P54868 508 aa21.89■■□□□ 1.1
SNRPN-207ENST00000554227 ZNF526Q8TF50 670 aaPredicted RBP21.89■■□□□ 1.1
SNRPN-207ENST00000554227 LPAR1Q92633 364 aa21.89■■□□□ 1.1
SNRPN-207ENST00000554227 FEM1BQ9UK73 627 aa21.89■■□□□ 1.1
SNRPN-207ENST00000554227 AFG3L2Q9Y4W6 797 aa21.89■■□□□ 1.1
SNRPN-207ENST00000554227 MRVI1Q9Y6F6 885 aa21.89■■□□□ 1.1
SNRPN-207ENST00000554227 ESYT2A0FGR8 921 aa21.89■■□□□ 1.09
SNRPN-207ENST00000554227 GOLGA6L4A6NEF3 574 aa21.89■■□□□ 1.09
SNRPN-207ENST00000554227 WDR46O15213 610 aaKnown RBP21.89■■□□□ 1.09
SNRPN-207ENST00000554227 NF2P35240 595 aa21.89■■□□□ 1.09
SNRPN-207ENST00000554227 IREB2P48200 963 aaKnown RBP21.89■■□□□ 1.09
SNRPN-207ENST00000554227 ADCY7P51828 1080 aa21.89■■□□□ 1.09
SNRPN-207ENST00000554227 JAKMIP3Q5VZ66 844 aa21.89■■□□□ 1.09
SNRPN-207ENST00000554227 CCDC174Q6PII3 467 aa21.89■■□□□ 1.09
SNRPN-207ENST00000554227 FBXO11Q86XK2 927 aa21.89■■□□□ 1.09
SNRPN-207ENST00000554227 FAM177A1Q8N128 213 aaPredicted RBP21.89■■□□□ 1.09
SNRPN-207ENST00000554227 NMRK2Q9NPI5 230 aa21.89■■□□□ 1.09
SNRPN-207ENST00000554227 TMEM63CQ9P1W3 806 aa21.89■■□□□ 1.09
SNRPN-207ENST00000554227 LIG1P18858 919 aa21.88■■□□□ 1.09
SNRPN-207ENST00000554227 ZNF174Q15697 407 aa21.88■■□□□ 1.09
SNRPN-207ENST00000554227 UBE2SQ16763 222 aa21.88■■□□□ 1.09
SNRPN-207ENST00000554227 AMNQ9BXJ7 453 aa21.88■■□□□ 1.09
SNRPN-207ENST00000554227 TANGO6Q9C0B7 1094 aa21.88■■□□□ 1.09
SNRPN-207ENST00000554227 ELP3Q9H9T3 547 aa21.88■■□□□ 1.09
SNRPN-207ENST00000554227 CCDC194A0A1B0GVG4 234 aa21.87■■□□□ 1.09
SNRPN-207ENST00000554227 PLA2G6O60733 806 aa21.87■■□□□ 1.09
SNRPN-207ENST00000554227 USP14P54578 494 aa21.87■■□□□ 1.09
SNRPN-207ENST00000554227 INF2Q27J81 1249 aa21.87■■□□□ 1.09
SNRPN-207ENST00000554227 PPP1R18Q6NYC8 613 aa21.87■■□□□ 1.09
SNRPN-207ENST00000554227 FAM160B2Q86V87 743 aa21.87■■□□□ 1.09
SNRPN-207ENST00000554227 KCNG4Q8TDN1 519 aa21.87■■□□□ 1.09
SNRPN-207ENST00000554227 RANBP17Q9H2T7 1088 aaKnown RBP21.87■■□□□ 1.09
SNRPN-207ENST00000554227 RPAP3Q9H6T3 665 aaPredicted RBP21.87■■□□□ 1.09
SNRPN-207ENST00000554227 RIC8AQ9NPQ8 531 aa21.87■■□□□ 1.09
SNRPN-207ENST00000554227 CSADQ9Y600 493 aa21.87■■□□□ 1.09
SNRPN-207ENST00000554227 PTPRFP10586 1907 aa21.87■■□□□ 1.09
SNRPN-207ENST00000554227 TTC38Q5R3I4 469 aa21.87■■□□□ 1.09
SNRPN-207ENST00000554227 REXO1Q8N1G1 1221 aaKnown RBP21.87■■□□□ 1.09
SNRPN-207ENST00000554227 BICD2Q8TD16 824 aa21.87■■□□□ 1.09
SNRPN-207ENST00000554227 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.87■■□□□ 1.09
SNRPN-207ENST00000554227 NOL7Q9UMY1 257 aaKnown RBP21.87■■□□□ 1.09
SNRPN-207ENST00000554227 PARP14Q460N5 1801 aa21.86■■□□□ 1.09
SNRPN-207ENST00000554227 SLF1Q9BQI6 1058 aa21.86■■□□□ 1.09
SNRPN-207ENST00000554227 PSTPIP2Q9H939 334 aa21.86■■□□□ 1.09
SNRPN-207ENST00000554227 ZNF408Q9H9D4 720 aa21.86■■□□□ 1.09
SNRPN-207ENST00000554227 USP17L15C9J2P7 530 aa21.85■■□□□ 1.09
SNRPN-207ENST00000554227 USP17L13C9JLJ4 530 aa21.85■■□□□ 1.09
SNRPN-207ENST00000554227 USP17L11C9JVI0 530 aa21.85■■□□□ 1.09
SNRPN-207ENST00000554227 USP17L18D6R9N7 530 aa21.85■■□□□ 1.09
SNRPN-207ENST00000554227 USP17L22D6RA61 530 aa21.85■■□□□ 1.09
SNRPN-207ENST00000554227 USP17L17D6RBQ6 530 aa21.85■■□□□ 1.09
SNRPN-207ENST00000554227 USP17L19D6RCP7 530 aa21.85■■□□□ 1.09
SNRPN-207ENST00000554227 USP17L20D6RJB6 530 aa21.85■■□□□ 1.09
SNRPN-207ENST00000554227 USP17L24Q0WX57 530 aa21.85■■□□□ 1.09
SNRPN-207ENST00000554227 AXDND1Q5T1B0 1012 aaPredicted RBP21.85■■□□□ 1.09
SNRPN-207ENST00000554227 USP17L6PQ6QN14 398 aa21.85■■□□□ 1.09
SNRPN-207ENST00000554227 CCAR1Q8IX12 1150 aaKnown RBP21.85■■□□□ 1.09
SNRPN-207ENST00000554227 CLIC6Q96NY7 704 aa21.85■■□□□ 1.09
SNRPN-207ENST00000554227 GOLPH3LQ9H4A5 285 aa21.85■■□□□ 1.09
SNRPN-207ENST00000554227 RLFQ13129 1914 aa21.85■■□□□ 1.09
SNRPN-207ENST00000554227 FLOT1O75955 427 aa21.84■■□□□ 1.09
SNRPN-207ENST00000554227 ANKRD13AQ8IZ07 590 aa21.84■■□□□ 1.09
SNRPN-207ENST00000554227 CUL5Q93034 780 aa21.84■■□□□ 1.09
SNRPN-207ENST00000554227 DCAF8L1A6NGE4 600 aa21.84■■□□□ 1.09
SNRPN-207ENST00000554227 C19orf81C9J6K1 198 aa21.84■■□□□ 1.09
SNRPN-207ENST00000554227 MCM7P33993 719 aa21.84■■□□□ 1.09
SNRPN-207ENST00000554227 GRIN1Q05586 938 aa21.84■■□□□ 1.09
SNRPN-207ENST00000554227 ADALQ6DHV7 355 aa21.84■■□□□ 1.09
SNRPN-207ENST00000554227 KRT25Q7Z3Z0 450 aa21.84■■□□□ 1.09
SNRPN-207ENST00000554227 PRPF38AQ8NAV1 312 aaKnown RBP21.84■■□□□ 1.09
SNRPN-207ENST00000554227 OTUD5Q96G74 571 aa21.84■■□□□ 1.09
SNRPN-207ENST00000554227 C12orf42Q96LP6 360 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms