RNA–Protein interactions for RNA: ENST00000554116.5

TUBB3-204, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-204ENST00000554116 DDX49Q9Y6V7 483 aaKnown RBP13.84□□□□□ -0.19
TUBB3-204ENST00000554116 ELP1O95163 1332 aa13.84□□□□□ -0.19
TUBB3-204ENST00000554116 LRRC37A2A6NM11 1700 aa13.84□□□□□ -0.19
TUBB3-204ENST00000554116 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.83□□□□□ -0.2
TUBB3-204ENST00000554116 DCDC2CA8MYV0 355 aa13.83□□□□□ -0.2
TUBB3-204ENST00000554116 PRDM1O75626 825 aa13.83□□□□□ -0.2
TUBB3-204ENST00000554116 CD4P01730 458 aa13.83□□□□□ -0.2
TUBB3-204ENST00000554116 CSF2RAP15509 400 aa13.83□□□□□ -0.2
TUBB3-204ENST00000554116 CNTN2Q02246 1040 aa13.83□□□□□ -0.2
TUBB3-204ENST00000554116 TMEM63BQ5T3F8 832 aa13.83□□□□□ -0.2
TUBB3-204ENST00000554116 TSHZ3Q63HK5 1081 aa13.83□□□□□ -0.2
TUBB3-204ENST00000554116 GIMAP6Q6P9H5 292 aa13.83□□□□□ -0.2
TUBB3-204ENST00000554116 FAM126BQ8IXS8 530 aa13.83□□□□□ -0.2
TUBB3-204ENST00000554116 CEP95Q96GE4 821 aa13.83□□□□□ -0.2
TUBB3-204ENST00000554116 PBX4Q9BYU1 374 aa13.83□□□□□ -0.2
TUBB3-204ENST00000554116 MTMR4Q9NYA4 1195 aa13.83□□□□□ -0.2
TUBB3-204ENST00000554116 ZHX1Q9UKY1 873 aaPredicted RBP13.83□□□□□ -0.2
TUBB3-204ENST00000554116 ZNF536O15090 1300 aa13.83□□□□□ -0.2
TUBB3-204ENST00000554116 GRIN2DO15399 1336 aa13.83□□□□□ -0.2
TUBB3-204ENST00000554116 SOWAHBA6NEL2 793 aa13.82□□□□□ -0.2
TUBB3-204ENST00000554116 MINDY4BA8MYZ0 360 aa13.82□□□□□ -0.2
TUBB3-204ENST00000554116 M0R2C6 588 aa13.82□□□□□ -0.2
TUBB3-204ENST00000554116 ARVCFO00192 962 aa13.82□□□□□ -0.2
TUBB3-204ENST00000554116 ACRP10323 421 aa13.82□□□□□ -0.2
TUBB3-204ENST00000554116 ADGRE1Q14246 886 aa13.82□□□□□ -0.2
TUBB3-204ENST00000554116 ARMCX2Q7L311 632 aa13.82□□□□□ -0.2
TUBB3-204ENST00000554116 CCDC144CPQ8IYA2 1237 aa13.82□□□□□ -0.2
TUBB3-204ENST00000554116 FAM133AQ8N9E0 248 aa13.82□□□□□ -0.2
TUBB3-204ENST00000554116 KBTBD3Q8NAB2 608 aa13.82□□□□□ -0.2
TUBB3-204ENST00000554116 SLC43A3Q8NBI5 491 aa13.82□□□□□ -0.2
TUBB3-204ENST00000554116 NUP133Q8WUM0 1156 aa13.82□□□□□ -0.2
TUBB3-204ENST00000554116 TIFAQ96CG3 184 aa13.82□□□□□ -0.2
TUBB3-204ENST00000554116 DDX11Q96FC9 970 aa13.82□□□□□ -0.2
TUBB3-204ENST00000554116 ABHD16BQ9H3Z7 469 aa13.82□□□□□ -0.2
TUBB3-204ENST00000554116 CXXC1Q9P0U4 656 aaPredicted RBP13.82□□□□□ -0.2
TUBB3-204ENST00000554116 UMODL1Q5DID0 1318 aa13.82□□□□□ -0.2
TUBB3-204ENST00000554116 C6orf222P0C671 652 aaPredicted RBP13.81□□□□□ -0.2
TUBB3-204ENST00000554116 SLC4A3P48751 1232 aa13.81□□□□□ -0.2
TUBB3-204ENST00000554116 BEX3Q00994 111 aa13.81□□□□□ -0.2
TUBB3-204ENST00000554116 ZSCAN25Q6NSZ9 544 aa13.81□□□□□ -0.2
TUBB3-204ENST00000554116 ZNF365Q70YC5 407 aa13.81□□□□□ -0.2
TUBB3-204ENST00000554116 AMOTL1Q8IY63 956 aa13.81□□□□□ -0.2
TUBB3-204ENST00000554116 ATXN2LQ8WWM7 1075 aaKnown RBP13.81□□□□□ -0.2
TUBB3-204ENST00000554116 KIFC2Q96AC6 838 aa13.81□□□□□ -0.2
TUBB3-204ENST00000554116 SEC62Q99442 399 aaKnown RBP13.81□□□□□ -0.2
TUBB3-204ENST00000554116 LRRCC1Q9C099 1032 aa13.81□□□□□ -0.2
TUBB3-204ENST00000554116 MKNK2Q9HBH9 465 aa13.81□□□□□ -0.2
TUBB3-204ENST00000554116 FOXP2O15409 715 aa13.8□□□□□ -0.2
TUBB3-204ENST00000554116 GPAA1O43292 621 aa13.8□□□□□ -0.2
TUBB3-204ENST00000554116 ZBED4O75132 1171 aa13.8□□□□□ -0.2
TUBB3-204ENST00000554116 CYP2C18P33260 490 aa13.8□□□□□ -0.2
TUBB3-204ENST00000554116 PLA2G5P39877 138 aa13.8□□□□□ -0.2
TUBB3-204ENST00000554116 RASGRP2Q7LDG7 609 aa13.8□□□□□ -0.2
TUBB3-204ENST00000554116 LRRC47Q8N1G4 583 aaKnown RBP13.8□□□□□ -0.2
TUBB3-204ENST00000554116 GMCL1P1Q8NEA9 526 aa13.8□□□□□ -0.2
TUBB3-204ENST00000554116 CHST13Q8NET6 341 aa13.8□□□□□ -0.2
TUBB3-204ENST00000554116 APPBP2Q92624 585 aa13.8□□□□□ -0.2
TUBB3-204ENST00000554116 DDRGK1Q96HY6 314 aa13.8□□□□□ -0.2
TUBB3-204ENST00000554116 GLT1D1Q96MS3 346 aa13.8□□□□□ -0.2
TUBB3-204ENST00000554116 GAS2L1Q99501 681 aaPredicted RBP13.8□□□□□ -0.2
TUBB3-204ENST00000554116 ECHDC1Q9NTX5 307 aa13.8□□□□□ -0.2
TUBB3-204ENST00000554116 THEGQ9P2T0 379 aa13.8□□□□□ -0.2
TUBB3-204ENST00000554116 FEM1BQ9UK73 627 aa13.8□□□□□ -0.2
TUBB3-204ENST00000554116 GNEQ9Y223 722 aaKnown RBP13.8□□□□□ -0.2
TUBB3-204ENST00000554116 PLIN4Q96Q06 1357 aa13.8□□□□□ -0.2
TUBB3-204ENST00000554116 RNF113AO15541 343 aaKnown RBP13.79□□□□□ -0.2
TUBB3-204ENST00000554116 OAZ1P54368 228 aa13.79□□□□□ -0.2
TUBB3-204ENST00000554116 RRP1P56182 461 aaKnown RBP13.79□□□□□ -0.2
TUBB3-204ENST00000554116 GNASQ5JWF2 1037 aa13.79□□□□□ -0.2
TUBB3-204ENST00000554116 ANKRD35Q8N283 1001 aa13.79□□□□□ -0.2
TUBB3-204ENST00000554116 PCSK9Q8NBP7 692 aaKnown RBP13.79□□□□□ -0.2
TUBB3-204ENST00000554116 NEDD1Q8NHV4 660 aa13.79□□□□□ -0.2
TUBB3-204ENST00000554116 AGBL1Q96MI9 1066 aa13.79□□□□□ -0.2
TUBB3-204ENST00000554116 PPP1R12CQ9BZL4 782 aa13.79□□□□□ -0.2
TUBB3-204ENST00000554116 PRDM12Q9H4Q4 367 aa13.79□□□□□ -0.2
TUBB3-204ENST00000554116 A1CFQ9NQ94 594 aaKnown RBP13.79□□□□□ -0.2
TUBB3-204ENST00000554116 INCENPQ9NQS7 918 aa13.79□□□□□ -0.2
TUBB3-204ENST00000554116 A0A0U1RQG5 324 aaPredicted RBP13.78□□□□□ -0.2
TUBB3-204ENST00000554116 PATL2C9JE40 543 aaKnown RBP13.78□□□□□ -0.2
TUBB3-204ENST00000554116 PPIGQ13427 754 aaKnown RBP eCLIP13.78□□□□□ -0.2
TUBB3-204ENST00000554116 AKNAD1Q5T1N1 836 aa13.78□□□□□ -0.2
TUBB3-204ENST00000554116 SLFN13Q68D06 897 aa13.78□□□□□ -0.2
TUBB3-204ENST00000554116 TAPT1Q6NXT6 567 aa13.78□□□□□ -0.2
TUBB3-204ENST00000554116 CCDC174Q6PII3 467 aa13.78□□□□□ -0.2
TUBB3-204ENST00000554116 CXCL17Q6UXB2 119 aa13.78□□□□□ -0.2
TUBB3-204ENST00000554116 IFNL3Q8IZI9 196 aa13.78□□□□□ -0.2
TUBB3-204ENST00000554116 HERVK_113Q902F9 699 aa13.78□□□□□ -0.2
TUBB3-204ENST00000554116 PURBQ96QR8 312 aaKnown RBP13.78□□□□□ -0.2
TUBB3-204ENST00000554116 PDGFCQ9NRA1 345 aa13.78□□□□□ -0.2
TUBB3-204ENST00000554116 HOMER2Q9NSB8 354 aa13.78□□□□□ -0.2
TUBB3-204ENST00000554116 SYNPO2Q9UMS6 1093 aa13.78□□□□□ -0.2
TUBB3-204ENST00000554116 YBX2Q9Y2T7 364 aaKnown RBP13.78□□□□□ -0.2
TUBB3-204ENST00000554116 TMEM232C9JQI7 657 aa13.77□□□□□ -0.21
TUBB3-204ENST00000554116 TTLL1O95922 423 aa13.77□□□□□ -0.21
TUBB3-204ENST00000554116 BMP3P12645 472 aa13.77□□□□□ -0.21
TUBB3-204ENST00000554116 SMPD1P17405 629 aa13.77□□□□□ -0.21
TUBB3-204ENST00000554116 SNAP25P60880 206 aa13.77□□□□□ -0.21
TUBB3-204ENST00000554116 SCN5AQ14524 2016 aa13.77□□□□□ -0.21
TUBB3-204ENST00000554116 MUM1L1Q5H9M0 696 aa13.77□□□□□ -0.21
TUBB3-204ENST00000554116 PRRC2BQ5JSZ5 2229 aaKnown RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms