RNA–Protein interactions for RNA: ENST00000553801.1

SYNE2-211, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-211ENST00000553801 GNAT2P19087 354 aa21.15■□□□□ 0.98
SYNE2-211ENST00000553801 PSRC1Q6PGN9 363 aaPredicted RBP21.15■□□□□ 0.98
SYNE2-211ENST00000553801 ARMCX2Q7L311 632 aa21.15■□□□□ 0.98
SYNE2-211ENST00000553801 ECHDC1Q9NTX5 307 aa21.15■□□□□ 0.98
SYNE2-211ENST00000553801 MCM3APO60318 1980 aa21.14■□□□□ 0.98
SYNE2-211ENST00000553801 PRUNE2Q8WUY3 3088 aa21.14■□□□□ 0.98
SYNE2-211ENST00000553801 MYH4Q9Y623 1939 aa21.14■□□□□ 0.98
SYNE2-211ENST00000553801 IGKV6D-41A0A0C4DH26 115 aa21.14■□□□□ 0.97
SYNE2-211ENST00000553801 TTLL1O95922 423 aa21.14■□□□□ 0.97
SYNE2-211ENST00000553801 KBTBD3Q8NAB2 608 aa21.14■□□□□ 0.97
SYNE2-211ENST00000553801 APPBP2Q92624 585 aa21.14■□□□□ 0.97
SYNE2-211ENST00000553801 EYSQ5T1H1 3165 aa21.14■□□□□ 0.97
SYNE2-211ENST00000553801 VCANP13611 3396 aa21.13■□□□□ 0.97
SYNE2-211ENST00000553801 ZFYP08048 801 aaPredicted RBP21.13■□□□□ 0.97
SYNE2-211ENST00000553801 CSF2RAP15509 400 aa21.13■□□□□ 0.97
SYNE2-211ENST00000553801 TDO2P48775 406 aa21.13■□□□□ 0.97
SYNE2-211ENST00000553801 RASIP1Q5U651 963 aa21.13■□□□□ 0.97
SYNE2-211ENST00000553801 C16orf59Q7L2K0 433 aa21.13■□□□□ 0.97
SYNE2-211ENST00000553801 GMCL1P1Q8NEA9 526 aa21.13■□□□□ 0.97
SYNE2-211ENST00000553801 OSBP2Q969R2 916 aa21.13■□□□□ 0.97
SYNE2-211ENST00000553801 CEP95Q96GE4 821 aa21.13■□□□□ 0.97
SYNE2-211ENST00000553801 GPATCH3Q96I76 525 aa21.13■□□□□ 0.97
SYNE2-211ENST00000553801 MTMR4Q9NYA4 1195 aa21.13■□□□□ 0.97
SYNE2-211ENST00000553801 RNF113AO15541 343 aaKnown RBP21.12■□□□□ 0.97
SYNE2-211ENST00000553801 ADCY6O43306 1168 aa21.12■□□□□ 0.97
SYNE2-211ENST00000553801 APPP05067 770 aa21.12■□□□□ 0.97
SYNE2-211ENST00000553801 BMP3P12645 472 aa21.12■□□□□ 0.97
SYNE2-211ENST00000553801 NKX3-2P78367 333 aa21.12■□□□□ 0.97
SYNE2-211ENST00000553801 IRX5P78411 483 aaPredicted RBP21.12■□□□□ 0.97
SYNE2-211ENST00000553801 ZNF365Q70YC5 407 aa21.12■□□□□ 0.97
SYNE2-211ENST00000553801 FAM126BQ8IXS8 530 aa21.12■□□□□ 0.97
SYNE2-211ENST00000553801 CCDC144CPQ8IYA2 1237 aa21.12■□□□□ 0.97
SYNE2-211ENST00000553801 USP38Q8NB14 1042 aa21.12■□□□□ 0.97
SYNE2-211ENST00000553801 FGD4Q96M96 766 aa21.12■□□□□ 0.97
SYNE2-211ENST00000553801 PBX4Q9BYU1 374 aa21.12■□□□□ 0.97
SYNE2-211ENST00000553801 PPP1R12CQ9BZL4 782 aa21.12■□□□□ 0.97
SYNE2-211ENST00000553801 MTIF3Q9H2K0 278 aaKnown RBP21.12■□□□□ 0.97
SYNE2-211ENST00000553801 CDH23Q9H251 3354 aa21.11■□□□□ 0.97
SYNE2-211ENST00000553801 GPAA1O43292 621 aa21.11■□□□□ 0.97
SYNE2-211ENST00000553801 SMARCA5O60264 1052 aaPredicted RBP21.11■□□□□ 0.97
SYNE2-211ENST00000553801 CABYRO75952 493 aa21.11■□□□□ 0.97
SYNE2-211ENST00000553801 TNFAIP2Q03169 654 aa21.11■□□□□ 0.97
SYNE2-211ENST00000553801 RAB30Q15771 203 aa21.11■□□□□ 0.97
SYNE2-211ENST00000553801 LRRFIP1Q32MZ4 808 aaKnown RBP21.11■□□□□ 0.97
SYNE2-211ENST00000553801 SLFN13Q68D06 897 aa21.11■□□□□ 0.97
SYNE2-211ENST00000553801 NOL8Q76FK4 1167 aaKnown RBP21.11■□□□□ 0.97
SYNE2-211ENST00000553801 CHURC1Q8WUH1 139 aa21.11■□□□□ 0.97
SYNE2-211ENST00000553801 ACAD9Q9H845 621 aa21.11■□□□□ 0.97
SYNE2-211ENST00000553801 MSRAQ9UJ68 235 aa21.11■□□□□ 0.97
SYNE2-211ENST00000553801 ASB14A6NK59 587 aa21.1■□□□□ 0.97
SYNE2-211ENST00000553801 GRXCR1A8MXD5 290 aa21.1■□□□□ 0.97
SYNE2-211ENST00000553801 PRDM1O75626 825 aa21.1■□□□□ 0.97
SYNE2-211ENST00000553801 ACRP10323 421 aa21.1■□□□□ 0.97
SYNE2-211ENST00000553801 PDE4BQ07343 736 aa21.1■□□□□ 0.97
SYNE2-211ENST00000553801 AKNAD1Q5T1N1 836 aa21.1■□□□□ 0.97
SYNE2-211ENST00000553801 LRRC47Q8N1G4 583 aaKnown RBP21.1■□□□□ 0.97
SYNE2-211ENST00000553801 SEZ6LQ9BYH1 1024 aa21.1■□□□□ 0.97
SYNE2-211ENST00000553801 NACAP1Q9BZK3 213 aa21.1■□□□□ 0.97
SYNE2-211ENST00000553801 KATNBL1Q9H079 304 aa21.1■□□□□ 0.97
SYNE2-211ENST00000553801 IL23AQ9NPF7 189 aa21.1■□□□□ 0.97
SYNE2-211ENST00000553801 HOMER2Q9NSB8 354 aa21.1■□□□□ 0.97
SYNE2-211ENST00000553801 ISY1Q9ULR0 285 aaKnown RBP21.1■□□□□ 0.97
SYNE2-211ENST00000553801 PATL2C9JE40 543 aaKnown RBP21.09■□□□□ 0.97
SYNE2-211ENST00000553801 TMEM232C9JQI7 657 aa21.09■□□□□ 0.97
SYNE2-211ENST00000553801 TNFRSF10AO00220 468 aa21.09■□□□□ 0.97
SYNE2-211ENST00000553801 ZEB2O60315 1214 aa21.09■□□□□ 0.97
SYNE2-211ENST00000553801 CD4P01730 458 aa21.09■□□□□ 0.97
SYNE2-211ENST00000553801 SLC3A2P08195 630 aaKnown RBP21.09■□□□□ 0.97
SYNE2-211ENST00000553801 TSPY3P0CV98 308 aa21.09■□□□□ 0.97
SYNE2-211ENST00000553801 TSPY8P0CW00 308 aa21.09■□□□□ 0.97
SYNE2-211ENST00000553801 PBX2P40425 430 aa21.09■□□□□ 0.97
SYNE2-211ENST00000553801 STAT2P52630 851 aa21.09■□□□□ 0.97
SYNE2-211ENST00000553801 CNTN2Q02246 1040 aa21.09■□□□□ 0.97
SYNE2-211ENST00000553801 TKFCQ3LXA3 575 aa21.09■□□□□ 0.97
SYNE2-211ENST00000553801 FAM160B2Q86V87 743 aa21.09■□□□□ 0.97
SYNE2-211ENST00000553801 FAM133AQ8N9E0 248 aa21.09■□□□□ 0.97
SYNE2-211ENST00000553801 NEDD1Q8NHV4 660 aa21.09■□□□□ 0.97
SYNE2-211ENST00000553801 ATXN2LQ8WWM7 1075 aaKnown RBP21.09■□□□□ 0.97
SYNE2-211ENST00000553801 HERVK_113Q902F9 699 aa21.09■□□□□ 0.97
SYNE2-211ENST00000553801 AP5M1Q9H0R1 490 aa21.09■□□□□ 0.97
SYNE2-211ENST00000553801 EPB41L4AQ9HCS5 686 aaPredicted RBP21.09■□□□□ 0.97
SYNE2-211ENST00000553801 CTAGE5O15320 804 aa21.08■□□□□ 0.97
SYNE2-211ENST00000553801 FGBP02675 491 aa21.08■□□□□ 0.97
SYNE2-211ENST00000553801 CYP2C18P33260 490 aa21.08■□□□□ 0.97
SYNE2-211ENST00000553801 BEX3Q00994 111 aa21.08■□□□□ 0.97
SYNE2-211ENST00000553801 IKQ13123 557 aaPredicted RBP21.08■□□□□ 0.97
SYNE2-211ENST00000553801 PPP4R3BQ5MIZ7 849 aa21.08■□□□□ 0.97
SYNE2-211ENST00000553801 IFNL3Q8IZI9 196 aa21.08■□□□□ 0.97
SYNE2-211ENST00000553801 MIER1Q8N108 512 aa21.08■□□□□ 0.97
SYNE2-211ENST00000553801 SLC43A3Q8NBI5 491 aa21.08■□□□□ 0.97
SYNE2-211ENST00000553801 PPM1EQ8WY54 764 aa21.08■□□□□ 0.97
SYNE2-211ENST00000553801 PRDM12Q9H4Q4 367 aa21.08■□□□□ 0.97
SYNE2-211ENST00000553801 CXCL17Q6UXB2 119 aa21.07■□□□□ 0.96
SYNE2-211ENST00000553801 STAG1Q8WVM7 1258 aa21.07■□□□□ 0.96
SYNE2-211ENST00000553801 HIPK3Q9H422 1215 aa21.07■□□□□ 0.96
SYNE2-211ENST00000553801 A1CFQ9NQ94 594 aaKnown RBP21.07■□□□□ 0.96
SYNE2-211ENST00000553801 RNF146Q9NTX7 359 aa21.07■□□□□ 0.96
SYNE2-211ENST00000553801 PLIN4Q96Q06 1357 aa21.07■□□□□ 0.96
SYNE2-211ENST00000553801 SPTBN5Q9NRC6 3674 aaKnown RBP21.06■□□□□ 0.96
SYNE2-211ENST00000553801 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms