RNA–Protein interactions for RNA: ENST00000553745.5

ABCD4-219, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 2

Gene ABCD4, Length 1,770 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-219ENST00000553745 ARMC9Q7Z3E5 817 aa16.15■□□□□ 0.18
ABCD4-219ENST00000553745 LPAR1Q92633 364 aa16.15■□□□□ 0.18
ABCD4-219ENST00000553745 MTMR8Q96EF0 704 aa16.15■□□□□ 0.18
ABCD4-219ENST00000553745 ZNF396Q96N95 335 aaPredicted RBP16.15■□□□□ 0.18
ABCD4-219ENST00000553745 USP28Q96RU2 1077 aa16.15■□□□□ 0.18
ABCD4-219ENST00000553745 ELP3Q9H9T3 547 aa16.15■□□□□ 0.18
ABCD4-219ENST00000553745 EMILIN3Q9NT22 766 aa16.15■□□□□ 0.18
ABCD4-219ENST00000553745 RLFQ13129 1914 aa16.14■□□□□ 0.17
ABCD4-219ENST00000553745 STXBP3O00186 592 aa16.14■□□□□ 0.17
ABCD4-219ENST00000553745 WDR46O15213 610 aaKnown RBP16.14■□□□□ 0.17
ABCD4-219ENST00000553745 NR1I2O75469 434 aa16.14■□□□□ 0.17
ABCD4-219ENST00000553745 CCDC192P0DO97 292 aa16.14■□□□□ 0.17
ABCD4-219ENST00000553745 VCAM1P19320 739 aa16.14■□□□□ 0.17
ABCD4-219ENST00000553745 USP14P54578 494 aa16.14■□□□□ 0.17
ABCD4-219ENST00000553745 DIS3L2Q8IYB7 885 aaKnown RBP16.14■□□□□ 0.17
ABCD4-219ENST00000553745 BARHL2Q9NY43 387 aa16.14■□□□□ 0.17
ABCD4-219ENST00000553745 CCDC39Q9UFE4 941 aa16.14■□□□□ 0.17
ABCD4-219ENST00000553745 AFG3L2Q9Y4W6 797 aa16.14■□□□□ 0.17
ABCD4-219ENST00000553745 PPP1R11O60927 126 aaPredicted RBP16.13■□□□□ 0.17
ABCD4-219ENST00000553745 HMGCS2P54868 508 aa16.13■□□□□ 0.17
ABCD4-219ENST00000553745 NPY5RQ15761 445 aa16.13■□□□□ 0.17
ABCD4-219ENST00000553745 CDC37Q16543 378 aaPredicted RBP16.13■□□□□ 0.17
ABCD4-219ENST00000553745 COL11A1P12107 1806 aaPredicted RBP16.13■□□□□ 0.17
ABCD4-219ENST00000553745 ZBTB5O15062 677 aa16.13■□□□□ 0.17
ABCD4-219ENST00000553745 SNAP25P60880 206 aa16.13■□□□□ 0.17
ABCD4-219ENST00000553745 QRICH1Q2TAL8 776 aa16.13■□□□□ 0.17
ABCD4-219ENST00000553745 OXER1Q8TDS5 423 aa16.13■□□□□ 0.17
ABCD4-219ENST00000553745 FTOQ9C0B1 505 aaKnown RBP eCLIP16.13■□□□□ 0.17
ABCD4-219ENST00000553745 TNMDQ9H2S6 317 aa16.13■□□□□ 0.17
ABCD4-219ENST00000553745 SH3GLB2Q9NR46 395 aa16.13■□□□□ 0.17
ABCD4-219ENST00000553745 FBXO28Q9NVF7 368 aa16.13■□□□□ 0.17
ABCD4-219ENST00000553745 PRR12Q9ULL5 1215 aa16.13■□□□□ 0.17
ABCD4-219ENST00000553745 MRVI1Q9Y6F6 885 aa16.13■□□□□ 0.17
ABCD4-219ENST00000553745 SMCHD1A6NHR9 2005 aa16.12■□□□□ 0.17
ABCD4-219ENST00000553745 PNMA6FA0A0J9YX94 578 aa16.12■□□□□ 0.17
ABCD4-219ENST00000553745 BTBD18B2RXH4 712 aa16.12■□□□□ 0.17
ABCD4-219ENST00000553745 NAPAP54920 295 aa16.12■□□□□ 0.17
ABCD4-219ENST00000553745 NLRP5P59047 1200 aa16.12■□□□□ 0.17
ABCD4-219ENST00000553745 TYRO3Q06418 890 aa16.12■□□□□ 0.17
ABCD4-219ENST00000553745 NR5A1Q13285 461 aa16.12■□□□□ 0.17
ABCD4-219ENST00000553745 GNL2Q13823 731 aaKnown RBP16.12■□□□□ 0.17
ABCD4-219ENST00000553745 SAFBQ15424 915 aaKnown RBP eCLIP16.12■□□□□ 0.17
ABCD4-219ENST00000553745 CAMK4Q16566 473 aa16.12■□□□□ 0.17
ABCD4-219ENST00000553745 CHADLQ6NUI6 762 aa16.12■□□□□ 0.17
ABCD4-219ENST00000553745 CCDC148Q8NFR7 591 aa16.12■□□□□ 0.17
ABCD4-219ENST00000553745 BICD2Q8TD16 824 aa16.12■□□□□ 0.17
ABCD4-219ENST00000553745 COA7Q96BR5 231 aa16.12■□□□□ 0.17
ABCD4-219ENST00000553745 OTUD5Q96G74 571 aa16.12■□□□□ 0.17
ABCD4-219ENST00000553745 C12orf42Q96LP6 360 aa16.12■□□□□ 0.17
ABCD4-219ENST00000553745 RTEL1Q9NZ71 1219 aa16.12■□□□□ 0.17
ABCD4-219ENST00000553745 SPDYE5A6NIY4 337 aa16.11■□□□□ 0.17
ABCD4-219ENST00000553745 hCG_1984214I3L0E3 225 aa16.11■□□□□ 0.17
ABCD4-219ENST00000553745 ADAMTS3O15072 1205 aa16.11■□□□□ 0.17
ABCD4-219ENST00000553745 PLA2G6O60733 806 aa16.11■□□□□ 0.17
ABCD4-219ENST00000553745 U2AF2P26368 475 aaKnown RBP eCLIP16.11■□□□□ 0.173e-8■■□□□ 11.6
ABCD4-219ENST00000553745 KRT2P35908 639 aa16.11■□□□□ 0.17
ABCD4-219ENST00000553745 SAMD1Q6SPF0 538 aaPredicted RBP16.11■□□□□ 0.17
ABCD4-219ENST00000553745 BRAPQ7Z569 592 aa16.11■□□□□ 0.17
ABCD4-219ENST00000553745 FAM160B2Q86V87 743 aa16.11■□□□□ 0.17
ABCD4-219ENST00000553745 ZNF713Q8N859 430 aaPredicted RBP16.11■□□□□ 0.17
ABCD4-219ENST00000553745 KIFC2Q96AC6 838 aa16.11■□□□□ 0.17
ABCD4-219ENST00000553745 TANGO6Q9C0B7 1094 aa16.11■□□□□ 0.17
ABCD4-219ENST00000553745 RPAP3Q9H6T3 665 aaPredicted RBP16.11■□□□□ 0.17
ABCD4-219ENST00000553745 USP25Q9UHP3 1055 aa16.11■□□□□ 0.17
ABCD4-219ENST00000553745 FEM1BQ9UK73 627 aa16.11■□□□□ 0.17
ABCD4-219ENST00000553745 ZKSCAN5Q9Y2L8 839 aa16.11■□□□□ 0.17
ABCD4-219ENST00000553745 C19orf81C9J6K1 198 aa16.1■□□□□ 0.17
ABCD4-219ENST00000553745 ZNF500O60304 480 aaPredicted RBP16.1■□□□□ 0.17
ABCD4-219ENST00000553745 CELF2O95319 508 aaKnown RBP16.1■□□□□ 0.17
ABCD4-219ENST00000553745 CEBPZQ03701 1054 aaKnown RBP16.1■□□□□ 0.17
ABCD4-219ENST00000553745 PPATQ06203 517 aa16.1■□□□□ 0.17
ABCD4-219ENST00000553745 LDLRAD1Q5T700 205 aa16.1■□□□□ 0.17
ABCD4-219ENST00000553745 ERO1BQ86YB8 467 aa16.1■□□□□ 0.17
ABCD4-219ENST00000553745 CHURC1Q8WUH1 139 aa16.1■□□□□ 0.17
ABCD4-219ENST00000553745 FOXP1Q9H334 677 aaPredicted RBP16.1■□□□□ 0.17
ABCD4-219ENST00000553745 GBA2Q9HCG7 927 aaPredicted RBP16.1■□□□□ 0.17
ABCD4-219ENST00000553745 BRMS1Q9HCU9 246 aa16.1■□□□□ 0.17
ABCD4-219ENST00000553745 IRF6O14896 467 aa16.1■□□□□ 0.17
ABCD4-219ENST00000553745 AP5Z1O43299 807 aa16.1■□□□□ 0.17
ABCD4-219ENST00000553745 ADCY5O95622 1261 aa16.1■□□□□ 0.17
ABCD4-219ENST00000553745 ITGBL1O95965 494 aaPredicted RBP16.1■□□□□ 0.17
ABCD4-219ENST00000553745 MSNP26038 577 aaKnown RBP16.1■□□□□ 0.17
ABCD4-219ENST00000553745 SH3D19Q5HYK7 790 aa16.1■□□□□ 0.17
ABCD4-219ENST00000553745 MYSM1Q5VVJ2 828 aa16.1■□□□□ 0.17
ABCD4-219ENST00000553745 NOSTRINQ8IVI9 506 aa16.1■□□□□ 0.17
ABCD4-219ENST00000553745 CKAP2LQ8IYA6 745 aa16.1■□□□□ 0.17
ABCD4-219ENST00000553745 ENGASEQ8NFI3 743 aa16.1■□□□□ 0.17
ABCD4-219ENST00000553745 CCDC12Q8WUD4 166 aaPredicted RBP16.1■□□□□ 0.17
ABCD4-219ENST00000553745 OPTNQ96CV9 577 aa16.1■□□□□ 0.17
ABCD4-219ENST00000553745 GPBP1L1Q9HC44 474 aaPredicted RBP16.1■□□□□ 0.17
ABCD4-219ENST00000553745 TMOD4Q9NZQ9 345 aa16.1■□□□□ 0.17
ABCD4-219ENST00000553745 TAL1P17542 331 aaPredicted RBP16.09■□□□□ 0.17
ABCD4-219ENST00000553745 CALML3P27482 149 aa16.09■□□□□ 0.17
ABCD4-219ENST00000553745 SNW1Q13573 536 aaKnown RBP16.09■□□□□ 0.17
ABCD4-219ENST00000553745 CCAR1Q8IX12 1150 aaKnown RBP16.09■□□□□ 0.17
ABCD4-219ENST00000553745 RBM46Q8TBY0 533 aaKnown RBP16.09■□□□□ 0.17
ABCD4-219ENST00000553745 FAM200AQ8TCP9 573 aa16.09■□□□□ 0.17
ABCD4-219ENST00000553745 SLF1Q9BQI6 1058 aa16.09■□□□□ 0.17
ABCD4-219ENST00000553745 RANBP17Q9H2T7 1088 aaKnown RBP16.09■□□□□ 0.17
ABCD4-219ENST00000553745 GOLPH3LQ9H4A5 285 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms