RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 PLEKHH3Q7Z736 793 aa16.1■□□□□ 0.17
TUBB3-202ENST00000553656 RIOX2Q8IUF8 465 aa16.1■□□□□ 0.17
TUBB3-202ENST00000553656 FANCBQ8NB91 859 aa16.1■□□□□ 0.17
TUBB3-202ENST00000553656 SOCS4Q8WXH5 440 aa16.1■□□□□ 0.17
TUBB3-202ENST00000553656 CPVLQ9H3G5 476 aa16.1■□□□□ 0.17
TUBB3-202ENST00000553656 VAT1LQ9HCJ6 419 aa16.1■□□□□ 0.17
TUBB3-202ENST00000553656 RBM28Q9NW13 759 aaKnown RBP16.1■□□□□ 0.17
TUBB3-202ENST00000553656 BRPF3Q9ULD4 1205 aa16.1■□□□□ 0.17
TUBB3-202ENST00000553656 CCPG1Q9ULG6 757 aa16.1■□□□□ 0.17
TUBB3-202ENST00000553656 COL11A1P12107 1806 aaPredicted RBP16.1■□□□□ 0.17
TUBB3-202ENST00000553656 CCDC196A0A1B0GTZ2 297 aa16.09■□□□□ 0.17
TUBB3-202ENST00000553656 ICAM1P05362 532 aa16.09■□□□□ 0.17
TUBB3-202ENST00000553656 METAP2P50579 478 aaKnown RBP eCLIP16.09■□□□□ 0.17
TUBB3-202ENST00000553656 NEK4P51957 841 aa16.09■□□□□ 0.17
TUBB3-202ENST00000553656 PKN2Q16513 984 aaKnown RBP16.09■□□□□ 0.17
TUBB3-202ENST00000553656 CDC37Q16543 378 aaPredicted RBP16.09■□□□□ 0.17
TUBB3-202ENST00000553656 GPR142Q7Z601 462 aa16.09■□□□□ 0.17
TUBB3-202ENST00000553656 ADGRF4Q8IZF3 695 aa16.09■□□□□ 0.17
TUBB3-202ENST00000553656 AGXT2Q9BYV1 514 aa16.09■□□□□ 0.17
TUBB3-202ENST00000553656 MGAMO43451 1857 aa16.08■□□□□ 0.17
TUBB3-202ENST00000553656 CTGFP29279 349 aa16.08■□□□□ 0.16
TUBB3-202ENST00000553656 PPP2R5BQ15173 497 aa16.08■□□□□ 0.16
TUBB3-202ENST00000553656 TKFCQ3LXA3 575 aa16.08■□□□□ 0.16
TUBB3-202ENST00000553656 HOMER1Q86YM7 354 aa16.08■□□□□ 0.16
TUBB3-202ENST00000553656 NUDT12Q9BQG2 462 aa16.08■□□□□ 0.16
TUBB3-202ENST00000553656 HOMER2Q9NSB8 354 aa16.08■□□□□ 0.16
TUBB3-202ENST00000553656 SRRDQ9UH36 339 aa16.08■□□□□ 0.16
TUBB3-202ENST00000553656 FBXO40Q9UH90 709 aa16.08■□□□□ 0.16
TUBB3-202ENST00000553656 FCER1AP12319 257 aa16.07■□□□□ 0.16
TUBB3-202ENST00000553656 ALAS1P13196 640 aa16.07■□□□□ 0.16
TUBB3-202ENST00000553656 PRKCZQ05513 592 aa16.07■□□□□ 0.16
TUBB3-202ENST00000553656 TRAF1Q13077 416 aa16.07■□□□□ 0.16
TUBB3-202ENST00000553656 TOB2Q14106 344 aaPredicted RBP16.07■□□□□ 0.16
TUBB3-202ENST00000553656 KCTD2Q14681 263 aa16.07■□□□□ 0.16
TUBB3-202ENST00000553656 CHST13Q8NET6 341 aa16.07■□□□□ 0.16
TUBB3-202ENST00000553656 RAET1EQ8TD07 263 aa16.07■□□□□ 0.16
TUBB3-202ENST00000553656 AGBL1Q96MI9 1066 aa16.07■□□□□ 0.16
TUBB3-202ENST00000553656 MMP19Q99542 508 aa16.07■□□□□ 0.16
TUBB3-202ENST00000553656 SPZ1Q9BXG8 430 aa16.07■□□□□ 0.16
TUBB3-202ENST00000553656 JMJD4Q9H9V9 463 aa16.07■□□□□ 0.16
TUBB3-202ENST00000553656 RNF146Q9NTX7 359 aa16.07■□□□□ 0.16
TUBB3-202ENST00000553656 SEC63Q9UGP8 760 aaKnown RBP16.07■□□□□ 0.16
TUBB3-202ENST00000553656 ZSWIM8A7E2V4 1837 aa16.07■□□□□ 0.16
TUBB3-202ENST00000553656 ZNF536O15090 1300 aa16.06■□□□□ 0.16
TUBB3-202ENST00000553656 SLC15A5A6NIM6 579 aa16.06■□□□□ 0.16
TUBB3-202ENST00000553656 STRNO43815 780 aa16.06■□□□□ 0.16
TUBB3-202ENST00000553656 PLEKHA8P1O95397 391 aa16.06■□□□□ 0.16
TUBB3-202ENST00000553656 PTPREP23469 700 aa16.06■□□□□ 0.16
TUBB3-202ENST00000553656 SMARCA1P28370 1054 aa16.06■□□□□ 0.16
TUBB3-202ENST00000553656 RABEP1Q15276 862 aa16.06■□□□□ 0.16
TUBB3-202ENST00000553656 QRICH1Q2TAL8 776 aa16.06■□□□□ 0.16
TUBB3-202ENST00000553656 TMTC3Q6ZXV5 915 aa16.06■□□□□ 0.16
TUBB3-202ENST00000553656 FBXO11Q86XK2 927 aa16.06■□□□□ 0.16
TUBB3-202ENST00000553656 RRP36Q96EU6 259 aaKnown RBP16.06■□□□□ 0.16
TUBB3-202ENST00000553656 TBC1D32Q96NH3 1257 aa16.06■□□□□ 0.16
TUBB3-202ENST00000553656 TRERF1Q96PN7 1200 aa16.06■□□□□ 0.16
TUBB3-202ENST00000553656 ALDH8A1Q9H2A2 487 aaPredicted RBP16.06■□□□□ 0.16
TUBB3-202ENST00000553656 RIOX1Q9H6W3 641 aa16.06■□□□□ 0.16
TUBB3-202ENST00000553656 ACAD9Q9H845 621 aa16.06■□□□□ 0.16
TUBB3-202ENST00000553656 RIPK3Q9Y572 518 aa16.06■□□□□ 0.16
TUBB3-202ENST00000553656 ZBTB5O15062 677 aa16.05■□□□□ 0.16
TUBB3-202ENST00000553656 RGS2P41220 211 aa16.05■□□□□ 0.16
TUBB3-202ENST00000553656 FLT3LGP49771 235 aa16.05■□□□□ 0.16
TUBB3-202ENST00000553656 AK2P54819 239 aa16.05■□□□□ 0.16
TUBB3-202ENST00000553656 EVCP57679 992 aa16.05■□□□□ 0.16
TUBB3-202ENST00000553656 CAP1Q01518 475 aa16.05■□□□□ 0.16
TUBB3-202ENST00000553656 USH1GQ495M9 461 aa16.05■□□□□ 0.16
TUBB3-202ENST00000553656 FBXO46Q6PJ61 603 aaPredicted RBP16.05■□□□□ 0.16
TUBB3-202ENST00000553656 ABRAQ8N0Z2 381 aa16.05■□□□□ 0.16
TUBB3-202ENST00000553656 PIBF1Q8WXW3 757 aa16.05■□□□□ 0.16
TUBB3-202ENST00000553656 ZNF274Q96GC6 653 aaPredicted RBP16.05■□□□□ 0.16
TUBB3-202ENST00000553656 LARP6Q9BRS8 491 aaKnown RBP16.05■□□□□ 0.16
TUBB3-202ENST00000553656 AMNQ9BXJ7 453 aa16.05■□□□□ 0.16
TUBB3-202ENST00000553656 SLC5A4Q9NY91 659 aa16.05■□□□□ 0.16
TUBB3-202ENST00000553656 PTPN22Q9Y2R2 807 aa16.05■□□□□ 0.16
TUBB3-202ENST00000553656 NID2Q14112 1375 aa16.04■□□□□ 0.16
TUBB3-202ENST00000553656 ABCB11O95342 1321 aa16.04■□□□□ 0.16
TUBB3-202ENST00000553656 PNMA6FA0A0J9YX94 578 aa16.04■□□□□ 0.16
TUBB3-202ENST00000553656 CYTH3O43739 400 aa16.04■□□□□ 0.16
TUBB3-202ENST00000553656 ADORA2AP29274 412 aa16.04■□□□□ 0.16
TUBB3-202ENST00000553656 PDIA3P30101 505 aaKnown RBP16.04■□□□□ 0.16
TUBB3-202ENST00000553656 MAP2K5Q13163 448 aa16.04■□□□□ 0.16
TUBB3-202ENST00000553656 GRB14Q14449 540 aa16.04■□□□□ 0.16
TUBB3-202ENST00000553656 CPLX2Q6PUV4 134 aaKnown RBP16.04■□□□□ 0.16
TUBB3-202ENST00000553656 NOL8Q76FK4 1167 aaKnown RBP16.04■□□□□ 0.16
TUBB3-202ENST00000553656 NBPF11Q86T75 865 aa16.04■□□□□ 0.16
TUBB3-202ENST00000553656 DPP9Q86TI2 863 aa16.04■□□□□ 0.16
TUBB3-202ENST00000553656 CMTR1Q8N1G2 835 aaKnown RBP16.04■□□□□ 0.16
TUBB3-202ENST00000553656 ANKRD35Q8N283 1001 aa16.04■□□□□ 0.16
TUBB3-202ENST00000553656 CCDC82Q8N4S0 544 aa16.04■□□□□ 0.16
TUBB3-202ENST00000553656 SRBD1Q8N5C6 995 aaKnown RBP16.04■□□□□ 0.16
TUBB3-202ENST00000553656 IL27Q8NEV9 243 aa16.04■□□□□ 0.16
TUBB3-202ENST00000553656 DDX11Q96FC9 970 aa16.04■□□□□ 0.16
TUBB3-202ENST00000553656 PIGSQ96S52 555 aa16.04■□□□□ 0.16
TUBB3-202ENST00000553656 SLKQ9H2G2 1235 aaPredicted RBP16.04■□□□□ 0.16
TUBB3-202ENST00000553656 GABRQQ9UN88 632 aa16.04■□□□□ 0.16
TUBB3-202ENST00000553656 PLXNB2O15031 1838 aa16.03■□□□□ 0.16
TUBB3-202ENST00000553656 CPLX1O14810 134 aa16.03■□□□□ 0.16
TUBB3-202ENST00000553656 ST18O60284 1047 aa16.03■□□□□ 0.16
TUBB3-202ENST00000553656 CYP2B6P20813 491 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms