RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 PDE4BQ07343 736 aa11.8□□□□□ -0.52
ACTN1-208ENST00000553370 GIMAP6Q6P9H5 292 aa11.8□□□□□ -0.52
ACTN1-208ENST00000553370 PRPF38AQ8NAV1 312 aaKnown RBP11.8□□□□□ -0.52
ACTN1-208ENST00000553370 NUP133Q8WUM0 1156 aa11.8□□□□□ -0.52
ACTN1-208ENST00000553370 LENG1Q96BZ8 264 aaPredicted RBP11.8□□□□□ -0.52
ACTN1-208ENST00000553370 RNPC3Q96LT9 517 aaKnown RBP11.8□□□□□ -0.52
ACTN1-208ENST00000553370 STRBPQ96SI9 672 aaKnown RBP11.8□□□□□ -0.52
ACTN1-208ENST00000553370 FSD1Q9BTV5 496 aa11.8□□□□□ -0.52
ACTN1-208ENST00000553370 STARD7Q9NQZ5 370 aa11.8□□□□□ -0.52
ACTN1-208ENST00000553370 HOMER2Q9NSB8 354 aa11.8□□□□□ -0.52
ACTN1-208ENST00000553370 ZNF214Q9UL59 606 aaPredicted RBP11.8□□□□□ -0.52
ACTN1-208ENST00000553370 PHF24Q9UPV7 400 aa11.8□□□□□ -0.52
ACTN1-208ENST00000553370 DIS3Q9Y2L1 958 aaKnown RBP11.8□□□□□ -0.52
ACTN1-208ENST00000553370 GBF1Q92538 1859 aa11.8□□□□□ -0.52
ACTN1-208ENST00000553370 PRUNE2Q8WUY3 3088 aa11.8□□□□□ -0.52
ACTN1-208ENST00000553370 ROBO3Q96MS0 1386 aa11.79□□□□□ -0.52
ACTN1-208ENST00000553370 A0A1W2PQ45 241 aaPredicted RBP11.79□□□□□ -0.52
ACTN1-208ENST00000553370 A0A1W2PQY0 241 aa11.79□□□□□ -0.52
ACTN1-208ENST00000553370 DCDC2CA8MYV0 355 aa11.79□□□□□ -0.52
ACTN1-208ENST00000553370 F5H6K3 240 aa11.79□□□□□ -0.52
ACTN1-208ENST00000553370 TTLL1O95922 423 aa11.79□□□□□ -0.52
ACTN1-208ENST00000553370 TIE1P35590 1138 aa11.79□□□□□ -0.52
ACTN1-208ENST00000553370 KLRC3Q07444 240 aa11.79□□□□□ -0.52
ACTN1-208ENST00000553370 SHHQ15465 462 aa11.79□□□□□ -0.52
ACTN1-208ENST00000553370 ZNF792Q3KQV3 632 aa11.79□□□□□ -0.52
ACTN1-208ENST00000553370 SBK1Q52WX2 424 aa11.79□□□□□ -0.52
ACTN1-208ENST00000553370 C20orf194Q5TEA3 1177 aa11.79□□□□□ -0.52
ACTN1-208ENST00000553370 NOL8Q76FK4 1167 aaKnown RBP11.79□□□□□ -0.52
ACTN1-208ENST00000553370 LRRC47Q8N1G4 583 aaKnown RBP11.79□□□□□ -0.52
ACTN1-208ENST00000553370 CHMP4CQ96CF2 233 aa11.79□□□□□ -0.52
ACTN1-208ENST00000553370 NAPBQ9H115 298 aa11.79□□□□□ -0.52
ACTN1-208ENST00000553370 TMEM39AQ9NV64 488 aa11.79□□□□□ -0.52
ACTN1-208ENST00000553370 NYAP2Q9P242 653 aa11.79□□□□□ -0.52
ACTN1-208ENST00000553370 DAXXQ9UER7 740 aaPredicted RBP11.79□□□□□ -0.52
ACTN1-208ENST00000553370 FBXO40Q9UH90 709 aa11.79□□□□□ -0.52
ACTN1-208ENST00000553370 FEM1BQ9UK73 627 aa11.79□□□□□ -0.52
ACTN1-208ENST00000553370 FAM184BQ9ULE4 1060 aa11.79□□□□□ -0.52
ACTN1-208ENST00000553370 TACC3Q9Y6A5 838 aa11.79□□□□□ -0.52
ACTN1-208ENST00000553370 GSG1L2A8MUP6 293 aa11.78□□□□□ -0.52
ACTN1-208ENST00000553370 M0R2C6 588 aa11.78□□□□□ -0.52
ACTN1-208ENST00000553370 C6orf222P0C671 652 aaPredicted RBP11.78□□□□□ -0.52
ACTN1-208ENST00000553370 TAL1P17542 331 aaPredicted RBP11.78□□□□□ -0.52
ACTN1-208ENST00000553370 FPGSQ05932 587 aa11.78□□□□□ -0.52
ACTN1-208ENST00000553370 SNX17Q15036 470 aa11.78□□□□□ -0.52
ACTN1-208ENST00000553370 PPP4R3BQ5MIZ7 849 aa11.78□□□□□ -0.52
ACTN1-208ENST00000553370 C9orf50Q5SZB4 431 aa11.78□□□□□ -0.52
ACTN1-208ENST00000553370 FAM109BQ6ICB4 259 aaPredicted RBP11.78□□□□□ -0.52
ACTN1-208ENST00000553370 MSL3Q8N5Y2 521 aaKnown RBP11.78□□□□□ -0.52
ACTN1-208ENST00000553370 RAVER2Q9HCJ3 691 aaKnown RBP11.78□□□□□ -0.52
ACTN1-208ENST00000553370 ADAMTS5Q9UNA0 930 aa11.78□□□□□ -0.52
ACTN1-208ENST00000553370 SYNGAP1Q96PV0 1343 aa11.78□□□□□ -0.52
ACTN1-208ENST00000553370 SYNRGQ9UMZ2 1314 aa11.78□□□□□ -0.52
ACTN1-208ENST00000553370 LRRC37A2A6NM11 1700 aa11.77□□□□□ -0.52
ACTN1-208ENST00000553370 EYSQ5T1H1 3165 aa11.77□□□□□ -0.52
ACTN1-208ENST00000553370 TRIM43BA6NCK2 446 aa11.77□□□□□ -0.53
ACTN1-208ENST00000553370 IGHA2P01877 340 aa11.77□□□□□ -0.53
ACTN1-208ENST00000553370 ACLYP53396 1101 aa11.77□□□□□ -0.53
ACTN1-208ENST00000553370 SLFN13Q68D06 897 aa11.77□□□□□ -0.53
ACTN1-208ENST00000553370 CCDC174Q6PII3 467 aa11.77□□□□□ -0.53
ACTN1-208ENST00000553370 SH3RF1Q7Z6J0 888 aa11.77□□□□□ -0.53
ACTN1-208ENST00000553370 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.77□□□□□ -0.53
ACTN1-208ENST00000553370 PCSK9Q8NBP7 692 aaKnown RBP11.77□□□□□ -0.53
ACTN1-208ENST00000553370 OSBP2Q969R2 916 aa11.77□□□□□ -0.53
ACTN1-208ENST00000553370 TRIM43Q96BQ3 446 aaPredicted RBP11.77□□□□□ -0.53
ACTN1-208ENST00000553370 CEP95Q96GE4 821 aa11.77□□□□□ -0.53
ACTN1-208ENST00000553370 GLT1D1Q96MS3 346 aa11.77□□□□□ -0.53
ACTN1-208ENST00000553370 GUCD1Q96NT3 240 aa11.77□□□□□ -0.53
ACTN1-208ENST00000553370 MTMR7Q9Y216 660 aa11.77□□□□□ -0.53
ACTN1-208ENST00000553370 MROH7Q68CQ1 1323 aa11.77□□□□□ -0.53
ACTN1-208ENST00000553370 NCOR1O75376 2440 aa11.77□□□□□ -0.53
ACTN1-208ENST00000553370 TTC28Q96AY4 2481 aa11.76□□□□□ -0.53
ACTN1-208ENST00000553370 MOXD2PA6NHM9 499 aa11.76□□□□□ -0.53
ACTN1-208ENST00000553370 TSPY2A6NKD2 308 aa11.76□□□□□ -0.53
ACTN1-208ENST00000553370 TTLL13PA6NNM8 815 aa11.76□□□□□ -0.53
ACTN1-208ENST00000553370 DPYSL4O14531 572 aa11.76□□□□□ -0.53
ACTN1-208ENST00000553370 TLR3O15455 904 aaKnown RBP11.76□□□□□ -0.53
ACTN1-208ENST00000553370 GABBR2O75899 941 aa11.76□□□□□ -0.53
ACTN1-208ENST00000553370 ZNF865P0CJ78 1059 aaPredicted RBP11.76□□□□□ -0.53
ACTN1-208ENST00000553370 BMP3P12645 472 aa11.76□□□□□ -0.53
ACTN1-208ENST00000553370 FOSL2P15408 326 aa11.76□□□□□ -0.53
ACTN1-208ENST00000553370 STAT2P52630 851 aa11.76□□□□□ -0.53
ACTN1-208ENST00000553370 C1orf53Q5VUE5 145 aa11.76□□□□□ -0.53
ACTN1-208ENST00000553370 CHST13Q8NET6 341 aa11.76□□□□□ -0.53
ACTN1-208ENST00000553370 REPS2Q8NFH8 660 aa11.76□□□□□ -0.53
ACTN1-208ENST00000553370 MAFAQ8NHW3 353 aaPredicted RBP11.76□□□□□ -0.53
ACTN1-208ENST00000553370 TSEN34Q9BSV6 310 aaKnown RBP11.76□□□□□ -0.53
ACTN1-208ENST00000553370 DCTPP1Q9H773 170 aa11.76□□□□□ -0.53
ACTN1-208ENST00000553370 ACAD9Q9H845 621 aa11.76□□□□□ -0.53
ACTN1-208ENST00000553370 EPB41L4AQ9HCS5 686 aaPredicted RBP11.76□□□□□ -0.53
ACTN1-208ENST00000553370 TOMM22Q9NS69 142 aa11.76□□□□□ -0.53
ACTN1-208ENST00000553370 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.76□□□□□ -0.53
ACTN1-208ENST00000553370 STX8Q9UNK0 236 aa11.76□□□□□ -0.53
ACTN1-208ENST00000553370 TTC41PQ6P2S7 1318 aa11.76□□□□□ -0.53
ACTN1-208ENST00000553370 PATL2C9JE40 543 aaKnown RBP11.75□□□□□ -0.53
ACTN1-208ENST00000553370 TMEM232C9JQI7 657 aa11.75□□□□□ -0.53
ACTN1-208ENST00000553370 POTEB2H3BUK9 544 aa11.75□□□□□ -0.53
ACTN1-208ENST00000553370 DUSP11O75319 330 aaKnown RBP11.75□□□□□ -0.53
ACTN1-208ENST00000553370 SLC1A4P43007 532 aa11.75□□□□□ -0.53
ACTN1-208ENST00000553370 OAZ1P54368 228 aa11.75□□□□□ -0.53
ACTN1-208ENST00000553370 SMAD3P84022 425 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms