RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 SH2B2O14492 632 aaPredicted RBP11.93□□□□□ -0.5
TRAFD1-208ENST00000552890 ZBTB43O43298 467 aa11.93□□□□□ -0.5
TRAFD1-208ENST00000552890 ADCY3O60266 1144 aa11.93□□□□□ -0.5
TRAFD1-208ENST00000552890 MSCO60682 206 aa11.93□□□□□ -0.5
TRAFD1-208ENST00000552890 HMGCRP04035 888 aa11.93□□□□□ -0.5
TRAFD1-208ENST00000552890 CASTP20810 708 aaKnown RBP11.93□□□□□ -0.5
TRAFD1-208ENST00000552890 RPS6KB1P23443 525 aa11.93□□□□□ -0.5
TRAFD1-208ENST00000552890 EXOSC10Q01780 885 aaKnown RBP11.93□□□□□ -0.5
TRAFD1-208ENST00000552890 TROAPQ12815 778 aa11.93□□□□□ -0.5
TRAFD1-208ENST00000552890 GRB14Q14449 540 aa11.93□□□□□ -0.5
TRAFD1-208ENST00000552890 GRM4Q14833 912 aa11.93□□□□□ -0.5
TRAFD1-208ENST00000552890 MORN1Q5T089 497 aa11.93□□□□□ -0.5
TRAFD1-208ENST00000552890 STOX1Q6ZVD7 989 aa11.93□□□□□ -0.5
TRAFD1-208ENST00000552890 RUFY3Q7L099 469 aa11.93□□□□□ -0.5
TRAFD1-208ENST00000552890 ANKRD35Q8N283 1001 aa11.93□□□□□ -0.5
TRAFD1-208ENST00000552890 MMP19Q99542 508 aa11.93□□□□□ -0.5
TRAFD1-208ENST00000552890 NUP88Q99567 741 aaPredicted RBP11.93□□□□□ -0.5
TRAFD1-208ENST00000552890 AMNQ9BXJ7 453 aa11.93□□□□□ -0.5
TRAFD1-208ENST00000552890 GLT8D2Q9H1C3 349 aa11.93□□□□□ -0.5
TRAFD1-208ENST00000552890 GPCPD1Q9NPB8 672 aa11.93□□□□□ -0.5
TRAFD1-208ENST00000552890 ADD3Q9UEY8 706 aaKnown RBP11.93□□□□□ -0.5
TRAFD1-208ENST00000552890 CCPG1Q9ULG6 757 aa11.93□□□□□ -0.5
TRAFD1-208ENST00000552890 MTMR7Q9Y216 660 aa11.93□□□□□ -0.5
TRAFD1-208ENST00000552890 MRPL11Q9Y3B7 192 aaKnown RBP11.93□□□□□ -0.5
TRAFD1-208ENST00000552890 GTF3C3Q9Y5Q9 886 aa11.93□□□□□ -0.5
TRAFD1-208ENST00000552890 SNX14Q9Y5W7 946 aa11.93□□□□□ -0.5
TRAFD1-208ENST00000552890 ABCB11O95342 1321 aa11.92□□□□□ -0.5
TRAFD1-208ENST00000552890 hCG_1984214I3L0E3 225 aa11.92□□□□□ -0.5
TRAFD1-208ENST00000552890 CNMDO75829 334 aa11.92□□□□□ -0.5
TRAFD1-208ENST00000552890 PRKCZQ05513 592 aa11.92□□□□□ -0.5
TRAFD1-208ENST00000552890 Q3C1V9 767 aa11.92□□□□□ -0.5
TRAFD1-208ENST00000552890 OLFML2BQ68BL8 750 aa11.92□□□□□ -0.5
TRAFD1-208ENST00000552890 ZNF467Q7Z7K2 595 aaPredicted RBP11.92□□□□□ -0.5
TRAFD1-208ENST00000552890 CPXCR1Q8N123 301 aa11.92□□□□□ -0.5
TRAFD1-208ENST00000552890 FAM177A1Q8N128 213 aaPredicted RBP11.92□□□□□ -0.5
TRAFD1-208ENST00000552890 ZNF713Q8N859 430 aaPredicted RBP11.92□□□□□ -0.5
TRAFD1-208ENST00000552890 FANCBQ8NB91 859 aa11.92□□□□□ -0.5
TRAFD1-208ENST00000552890 REPS2Q8NFH8 660 aa11.92□□□□□ -0.5
TRAFD1-208ENST00000552890 NUP133Q8WUM0 1156 aa11.92□□□□□ -0.5
TRAFD1-208ENST00000552890 RRP36Q96EU6 259 aaKnown RBP11.92□□□□□ -0.5
TRAFD1-208ENST00000552890 ABHD8Q96I13 439 aa11.92□□□□□ -0.5
TRAFD1-208ENST00000552890 SPZ1Q9BXG8 430 aa11.92□□□□□ -0.5
TRAFD1-208ENST00000552890 ALDH8A1Q9H2A2 487 aaPredicted RBP11.92□□□□□ -0.5
TRAFD1-208ENST00000552890 ZSWIM6Q9HCJ5 1215 aa11.92□□□□□ -0.5
TRAFD1-208ENST00000552890 GJD2Q9UKL4 321 aa11.92□□□□□ -0.5
TRAFD1-208ENST00000552890 HPS5Q9UPZ3 1129 aa11.92□□□□□ -0.5
TRAFD1-208ENST00000552890 PNMA6FA0A0J9YX94 578 aa11.91□□□□□ -0.5
TRAFD1-208ENST00000552890 ASB14A6NK59 587 aa11.91□□□□□ -0.5
TRAFD1-208ENST00000552890 ZBTB5O15062 677 aa11.91□□□□□ -0.5
TRAFD1-208ENST00000552890 ADORA2AP29274 412 aa11.91□□□□□ -0.5
TRAFD1-208ENST00000552890 ANTXR2P58335 489 aa11.91□□□□□ -0.5
TRAFD1-208ENST00000552890 AKAP17AQ02040 695 aaKnown RBP11.91□□□□□ -0.5
TRAFD1-208ENST00000552890 FBXO11Q86XK2 927 aa11.91□□□□□ -0.5
TRAFD1-208ENST00000552890 RASEFQ8IZ41 740 aa11.91□□□□□ -0.5
TRAFD1-208ENST00000552890 ADGRF4Q8IZF3 695 aa11.91□□□□□ -0.5
TRAFD1-208ENST00000552890 IL17RAQ96F46 866 aa11.91□□□□□ -0.5
TRAFD1-208ENST00000552890 TRERF1Q96PN7 1200 aa11.91□□□□□ -0.5
TRAFD1-208ENST00000552890 PORCNQ9H237 461 aa11.91□□□□□ -0.5
TRAFD1-208ENST00000552890 RAVER2Q9HCJ3 691 aaKnown RBP11.91□□□□□ -0.5
TRAFD1-208ENST00000552890 MAD2L2Q9UI95 211 aa11.91□□□□□ -0.5
TRAFD1-208ENST00000552890 FRMPD2Q68DX3 1309 aaPredicted RBP11.9□□□□□ -0.5
TRAFD1-208ENST00000552890 MGAMO43451 1857 aa11.9□□□□□ -0.5
TRAFD1-208ENST00000552890 CDKL5O76039 1030 aa11.9□□□□□ -0.5
TRAFD1-208ENST00000552890 ALAS1P13196 640 aa11.9□□□□□ -0.5
TRAFD1-208ENST00000552890 RTN1Q16799 776 aa11.9□□□□□ -0.5
TRAFD1-208ENST00000552890 MCTP2Q6DN12 878 aa11.9□□□□□ -0.5
TRAFD1-208ENST00000552890 APOA5Q6Q788 366 aa11.9□□□□□ -0.5
TRAFD1-208ENST00000552890 CCDC12Q8WUD4 166 aaPredicted RBP11.9□□□□□ -0.5
TRAFD1-208ENST00000552890 USP6NLQ92738 828 aa11.9□□□□□ -0.5
TRAFD1-208ENST00000552890 ZNF274Q96GC6 653 aaPredicted RBP11.9□□□□□ -0.5
TRAFD1-208ENST00000552890 AGXT2Q9BYV1 514 aa11.9□□□□□ -0.5
TRAFD1-208ENST00000552890 ARHGAP39Q9C0H5 1083 aa11.9□□□□□ -0.5
TRAFD1-208ENST00000552890 RIOX1Q9H6W3 641 aa11.9□□□□□ -0.5
TRAFD1-208ENST00000552890 HMX1Q9NP08 348 aaPredicted RBP11.9□□□□□ -0.5
TRAFD1-208ENST00000552890 RNF146Q9NTX7 359 aa11.9□□□□□ -0.5
TRAFD1-208ENST00000552890 CNPY2Q9Y2B0 182 aa11.9□□□□□ -0.5
TRAFD1-208ENST00000552890 PTCH2Q9Y6C5 1203 aa11.9□□□□□ -0.5
TRAFD1-208ENST00000552890 RPTORQ8N122 1335 aa11.89□□□□□ -0.51
TRAFD1-208ENST00000552890 SYNGAP1Q96PV0 1343 aa11.89□□□□□ -0.51
TRAFD1-208ENST00000552890 A0A0G2JMZ2 1700 aa11.89□□□□□ -0.51
TRAFD1-208ENST00000552890 KLF18A0A0U1RQI7 1052 aa11.89□□□□□ -0.51
TRAFD1-208ENST00000552890 POTEB2H3BUK9 544 aa11.89□□□□□ -0.51
TRAFD1-208ENST00000552890 METAP2P50579 478 aaKnown RBP eCLIP11.89□□□□□ -0.51
TRAFD1-208ENST00000552890 EVCP57679 992 aa11.89□□□□□ -0.51
TRAFD1-208ENST00000552890 CDC37Q16543 378 aaPredicted RBP11.89□□□□□ -0.51
TRAFD1-208ENST00000552890 CHST3Q7LGC8 479 aa11.89□□□□□ -0.51
TRAFD1-208ENST00000552890 TRIM22Q8IYM9 498 aa11.89□□□□□ -0.51
TRAFD1-208ENST00000552890 DNERQ8NFT8 737 aa11.89□□□□□ -0.51
TRAFD1-208ENST00000552890 ZNF333Q96JL9 665 aa11.89□□□□□ -0.51
TRAFD1-208ENST00000552890 PDRG1Q9NUG6 133 aa11.89□□□□□ -0.51
TRAFD1-208ENST00000552890 NAP1L2Q9ULW6 460 aaPredicted RBP11.89□□□□□ -0.51
TRAFD1-208ENST00000552890 ZNF236Q9UL36 1845 aa11.88□□□□□ -0.51
TRAFD1-208ENST00000552890 RLFQ13129 1914 aa11.88□□□□□ -0.51
TRAFD1-208ENST00000552890 GOLGA8AA7E2F4 631 aa11.88□□□□□ -0.51
TRAFD1-208ENST00000552890 GOLGA8BA8MQT2 603 aa11.88□□□□□ -0.51
TRAFD1-208ENST00000552890 CPLX1O14810 134 aa11.88□□□□□ -0.51
TRAFD1-208ENST00000552890 CYP2B6P20813 491 aa11.88□□□□□ -0.51
TRAFD1-208ENST00000552890 SLC16A2P36021 539 aa11.88□□□□□ -0.51
TRAFD1-208ENST00000552890 SLC4A3P48751 1232 aa11.88□□□□□ -0.51
TRAFD1-208ENST00000552890 ADCK5Q3MIX3 580 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms