RNA–Protein interactions for RNA: ENST00000552812.1

CACNB3-224, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

Gene CACNB3, Length 1,712 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-224ENST00000552812 HOMER1Q86YM7 354 aa12.94□□□□□ -0.34
CACNB3-224ENST00000552812 ADGRF4Q8IZF3 695 aa12.94□□□□□ -0.34
CACNB3-224ENST00000552812 PGBD1Q96JS3 809 aa12.94□□□□□ -0.34
CACNB3-224ENST00000552812 ZMYND12Q9H0C1 365 aa12.94□□□□□ -0.34
CACNB3-224ENST00000552812 GZF1Q9H116 711 aaPredicted RBP12.94□□□□□ -0.34
CACNB3-224ENST00000552812 SCAF8Q9UPN6 1271 aaKnown RBP12.94□□□□□ -0.34
CACNB3-224ENST00000552812 CLIC4Q9Y696 253 aa12.94□□□□□ -0.34
CACNB3-224ENST00000552812 PNMA6FA0A0J9YX94 578 aa12.93□□□□□ -0.34
CACNB3-224ENST00000552812 SPTLC2O15270 562 aa12.93□□□□□ -0.34
CACNB3-224ENST00000552812 TRAPPC10P48553 1259 aa12.93□□□□□ -0.34
CACNB3-224ENST00000552812 SF3A1Q15459 793 aaKnown RBP12.93□□□□□ -0.34
CACNB3-224ENST00000552812 NBPF12Q5TAG4 269 aaPredicted RBP12.93□□□□□ -0.34
CACNB3-224ENST00000552812 TYW1BQ6NUM6 668 aa12.93□□□□□ -0.34
CACNB3-224ENST00000552812 PPP1R18Q6NYC8 613 aa12.93□□□□□ -0.34
CACNB3-224ENST00000552812 BLIDQ8IZY5 108 aa12.93□□□□□ -0.34
CACNB3-224ENST00000552812 JMYQ8N9B5 988 aa12.93□□□□□ -0.34
CACNB3-224ENST00000552812 ZNF341Q9BYN7 854 aa12.93□□□□□ -0.34
CACNB3-224ENST00000552812 JMJD4Q9H9V9 463 aa12.93□□□□□ -0.34
CACNB3-224ENST00000552812 VAT1LQ9HCJ6 419 aa12.93□□□□□ -0.34
CACNB3-224ENST00000552812 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.93□□□□□ -0.34
CACNB3-224ENST00000552812 NOL7Q9UMY1 257 aaKnown RBP12.93□□□□□ -0.34
CACNB3-224ENST00000552812 MORC2Q9Y6X9 1032 aaPredicted RBP12.93□□□□□ -0.34
CACNB3-224ENST00000552812 ZBTB5O15062 677 aa12.93□□□□□ -0.34
CACNB3-224ENST00000552812 RAD21O60216 631 aa12.93□□□□□ -0.34
CACNB3-224ENST00000552812 PPP6R2O75170 966 aa12.93□□□□□ -0.34
CACNB3-224ENST00000552812 BMP3P12645 472 aa12.93□□□□□ -0.34
CACNB3-224ENST00000552812 GNA11P29992 359 aa12.93□□□□□ -0.34
CACNB3-224ENST00000552812 ECE1P42892 770 aa12.93□□□□□ -0.34
CACNB3-224ENST00000552812 ME1P48163 572 aa12.93□□□□□ -0.34
CACNB3-224ENST00000552812 TOB1P50616 345 aaPredicted RBP12.93□□□□□ -0.34
CACNB3-224ENST00000552812 NAPAP54920 295 aa12.93□□□□□ -0.34
CACNB3-224ENST00000552812 ADALQ6DHV7 355 aa12.93□□□□□ -0.34
CACNB3-224ENST00000552812 TTBK2Q6IQ55 1244 aa12.93□□□□□ -0.34
CACNB3-224ENST00000552812 BTNL9Q6UXG8 535 aa12.93□□□□□ -0.34
CACNB3-224ENST00000552812 VCPKMTQ9H867 229 aa12.93□□□□□ -0.34
CACNB3-224ENST00000552812 C6orf50Q9HD87 102 aa12.93□□□□□ -0.34
CACNB3-224ENST00000552812 TMEM63CQ9P1W3 806 aa12.93□□□□□ -0.34
CACNB3-224ENST00000552812 ZNF112Q9UJU3 913 aa12.93□□□□□ -0.34
CACNB3-224ENST00000552812 CEP131Q9UPN4 1083 aa12.93□□□□□ -0.34
CACNB3-224ENST00000552812 DOCK1Q14185 1865 aa12.92□□□□□ -0.34
CACNB3-224ENST00000552812 A0A1W2PQ27 194 aa12.92□□□□□ -0.34
CACNB3-224ENST00000552812 A0A1W2PQ64 194 aa12.92□□□□□ -0.34
CACNB3-224ENST00000552812 A0A1W2PQD8 194 aa12.92□□□□□ -0.34
CACNB3-224ENST00000552812 M0R2N6 131 aa12.92□□□□□ -0.34
CACNB3-224ENST00000552812 PTPAQ15257 358 aa12.92□□□□□ -0.34
CACNB3-224ENST00000552812 ZSCAN23Q3MJ62 389 aa12.92□□□□□ -0.34
CACNB3-224ENST00000552812 SUPT20HL1Q3ZLR7 823 aa12.92□□□□□ -0.34
CACNB3-224ENST00000552812 BICD2Q8TD16 824 aa12.92□□□□□ -0.34
CACNB3-224ENST00000552812 ACER1Q8TDN7 264 aa12.92□□□□□ -0.34
CACNB3-224ENST00000552812 ISY1Q9ULR0 285 aaKnown RBP12.92□□□□□ -0.34
CACNB3-224ENST00000552812 GLTPD2A6NH11 291 aa12.91□□□□□ -0.34
CACNB3-224ENST00000552812 PLA2G6O60733 806 aa12.91□□□□□ -0.34
CACNB3-224ENST00000552812 BMP15O95972 392 aa12.91□□□□□ -0.34
CACNB3-224ENST00000552812 SLC16A2P36021 539 aa12.91□□□□□ -0.34
CACNB3-224ENST00000552812 ZNF445P59923 1031 aa12.91□□□□□ -0.34
CACNB3-224ENST00000552812 USP50Q70EL3 339 aaPredicted RBP12.91□□□□□ -0.34
CACNB3-224ENST00000552812 DCPSQ96C86 337 aaKnown RBP12.91□□□□□ -0.34
CACNB3-224ENST00000552812 PCDHA7Q9UN72 937 aa12.91□□□□□ -0.34
CACNB3-224ENST00000552812 TRIM75PA6NK02 468 aa12.91□□□□□ -0.34
CACNB3-224ENST00000552812 USP17L10C9JJH3 530 aa12.91□□□□□ -0.34
CACNB3-224ENST00000552812 CCDC183Q5T5S1 534 aa12.91□□□□□ -0.34
CACNB3-224ENST00000552812 SCYL3Q8IZE3 742 aa12.91□□□□□ -0.34
CACNB3-224ENST00000552812 EFCAB3Q8N7B9 438 aa12.91□□□□□ -0.34
CACNB3-224ENST00000552812 ZC3H15Q8WU90 426 aaKnown RBP12.91□□□□□ -0.34
CACNB3-224ENST00000552812 LPAR1Q92633 364 aa12.91□□□□□ -0.34
CACNB3-224ENST00000552812 KIAA1683Q9H0B3 1180 aa12.91□□□□□ -0.34
CACNB3-224ENST00000552812 DDX19AQ9NUU7 478 aaKnown RBP12.91□□□□□ -0.34
CACNB3-224ENST00000552812 SCN4AP35499 1836 aa12.9□□□□□ -0.34
CACNB3-224ENST00000552812 SMCO2A6NFE2 343 aa12.9□□□□□ -0.34
CACNB3-224ENST00000552812 TMEM232C9JQI7 657 aa12.9□□□□□ -0.34
CACNB3-224ENST00000552812 LETM1O95202 739 aaPredicted RBP12.9□□□□□ -0.34
CACNB3-224ENST00000552812 STAT2P52630 851 aa12.9□□□□□ -0.34
CACNB3-224ENST00000552812 EARS2Q5JPH6 523 aaKnown RBP12.9□□□□□ -0.34
CACNB3-224ENST00000552812 SYDE2Q5VT97 1194 aa12.9□□□□□ -0.34
CACNB3-224ENST00000552812 PIK3AP1Q6ZUJ8 805 aa12.9□□□□□ -0.34
CACNB3-224ENST00000552812 SULF1Q8IWU6 871 aa12.9□□□□□ -0.34
CACNB3-224ENST00000552812 NUP88Q99567 741 aaPredicted RBP12.9□□□□□ -0.34
CACNB3-224ENST00000552812 FEZ1Q99689 392 aa12.9□□□□□ -0.34
CACNB3-224ENST00000552812 GLT8D2Q9H1C3 349 aa12.9□□□□□ -0.34
CACNB3-224ENST00000552812 SSC5DA1L4H1 1573 aa12.89□□□□□ -0.35
CACNB3-224ENST00000552812 UTRNP46939 3433 aa12.89□□□□□ -0.35
CACNB3-224ENST00000552812 CCDC194A0A1B0GVG4 234 aa12.89□□□□□ -0.35
CACNB3-224ENST00000552812 IQCA1LA6NCM1 817 aa12.89□□□□□ -0.35
CACNB3-224ENST00000552812 PPP1R11O60927 126 aaPredicted RBP12.89□□□□□ -0.35
CACNB3-224ENST00000552812 LIG1P18858 919 aa12.89□□□□□ -0.35
CACNB3-224ENST00000552812 INPP5BP32019 993 aa12.89□□□□□ -0.35
CACNB3-224ENST00000552812 TRAF1Q13077 416 aa12.89□□□□□ -0.35
CACNB3-224ENST00000552812 CDC37Q16543 378 aaPredicted RBP12.89□□□□□ -0.35
CACNB3-224ENST00000552812 QRICH1Q2TAL8 776 aa12.89□□□□□ -0.35
CACNB3-224ENST00000552812 AXDND1Q5T1B0 1012 aaPredicted RBP12.89□□□□□ -0.35
CACNB3-224ENST00000552812 KRT25Q7Z3Z0 450 aa12.89□□□□□ -0.35
CACNB3-224ENST00000552812 FAM160B2Q86V87 743 aa12.89□□□□□ -0.35
CACNB3-224ENST00000552812 CCAR1Q8IX12 1150 aaKnown RBP12.89□□□□□ -0.35
CACNB3-224ENST00000552812 SPICE1Q8N0Z3 855 aa12.89□□□□□ -0.35
CACNB3-224ENST00000552812 CHURC1Q8WUH1 139 aa12.89□□□□□ -0.35
CACNB3-224ENST00000552812 MRPS27Q92552 414 aaKnown RBP12.89□□□□□ -0.35
CACNB3-224ENST00000552812 KLRG1Q96E93 195 aa12.89□□□□□ -0.35
CACNB3-224ENST00000552812 WRNIP1Q96S55 665 aa12.89□□□□□ -0.35
CACNB3-224ENST00000552812 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.89□□□□□ -0.35
CACNB3-224ENST00000552812 PCDHA6Q9UN73 950 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms