RNA–Protein interactions for RNA: ENST00000550964.5

PFDN5-213, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-213ENST00000550964 MMP19Q99542 508 aa11.69□□□□□ -0.54
PFDN5-213ENST00000550964 PORCNQ9H237 461 aa11.69□□□□□ -0.54
PFDN5-213ENST00000550964 RANBP17Q9H2T7 1088 aaKnown RBP11.69□□□□□ -0.54
PFDN5-213ENST00000550964 ACAD9Q9H845 621 aa11.69□□□□□ -0.54
PFDN5-213ENST00000550964 FBXO28Q9NVF7 368 aa11.69□□□□□ -0.54
PFDN5-213ENST00000550964 NRBP1Q9UHY1 535 aa11.69□□□□□ -0.54
PFDN5-213ENST00000550964 GJD2Q9UKL4 321 aa11.69□□□□□ -0.54
PFDN5-213ENST00000550964 MTMR7Q9Y216 660 aa11.69□□□□□ -0.54
PFDN5-213ENST00000550964 SLC12A7Q9Y666 1083 aa11.69□□□□□ -0.54
PFDN5-213ENST00000550964 ZSWIM8A7E2V4 1837 aa11.68□□□□□ -0.54
PFDN5-213ENST00000550964 MSCO60682 206 aa11.68□□□□□ -0.54
PFDN5-213ENST00000550964 OLFML2BQ68BL8 750 aa11.68□□□□□ -0.54
PFDN5-213ENST00000550964 CYB5R4Q7L1T6 521 aa11.68□□□□□ -0.54
PFDN5-213ENST00000550964 SGMS1Q86VZ5 419 aa11.68□□□□□ -0.54
PFDN5-213ENST00000550964 SKAP1Q86WV1 359 aa11.68□□□□□ -0.54
PFDN5-213ENST00000550964 MCF2L2Q86YR7 1114 aa11.68□□□□□ -0.54
PFDN5-213ENST00000550964 TEX2Q8IWB9 1127 aa11.68□□□□□ -0.54
PFDN5-213ENST00000550964 ANKRD35Q8N283 1001 aa11.68□□□□□ -0.54
PFDN5-213ENST00000550964 REPS2Q8NFH8 660 aa11.68□□□□□ -0.54
PFDN5-213ENST00000550964 IGDCC4Q8TDY8 1250 aa11.68□□□□□ -0.54
PFDN5-213ENST00000550964 ZNF333Q96JL9 665 aa11.68□□□□□ -0.54
PFDN5-213ENST00000550964 TM6SF1Q9BZW5 370 aa11.68□□□□□ -0.54
PFDN5-213ENST00000550964 UPF2Q9HAU5 1272 aaKnown RBP11.68□□□□□ -0.54
PFDN5-213ENST00000550964 GPCPD1Q9NPB8 672 aa11.68□□□□□ -0.54
PFDN5-213ENST00000550964 MAP3K20Q9NYL2 800 aaKnown RBP11.68□□□□□ -0.54
PFDN5-213ENST00000550964 KLRF2D3W0D1 207 aa11.67□□□□□ -0.54
PFDN5-213ENST00000550964 CYP2B6P20813 491 aa11.67□□□□□ -0.54
PFDN5-213ENST00000550964 ADORA2AP29274 412 aa11.67□□□□□ -0.54
PFDN5-213ENST00000550964 CTGFP29279 349 aa11.67□□□□□ -0.54
PFDN5-213ENST00000550964 GRM4Q14833 912 aa11.67□□□□□ -0.54
PFDN5-213ENST00000550964 ZNF467Q7Z7K2 595 aaPredicted RBP11.67□□□□□ -0.54
PFDN5-213ENST00000550964 FBXL16Q8N461 479 aa11.67□□□□□ -0.54
PFDN5-213ENST00000550964 RGS22Q8NE09 1264 aa11.67□□□□□ -0.54
PFDN5-213ENST00000550964 USP6NLQ92738 828 aa11.67□□□□□ -0.54
PFDN5-213ENST00000550964 CHMP4CQ96CF2 233 aa11.67□□□□□ -0.54
PFDN5-213ENST00000550964 USP26Q9BXU7 913 aa11.67□□□□□ -0.54
PFDN5-213ENST00000550964 HMX1Q9NP08 348 aaPredicted RBP11.67□□□□□ -0.54
PFDN5-213ENST00000550964 RBM28Q9NW13 759 aaKnown RBP11.67□□□□□ -0.54
PFDN5-213ENST00000550964 ADD3Q9UEY8 706 aaKnown RBP11.67□□□□□ -0.54
PFDN5-213ENST00000550964 CCPG1Q9ULG6 757 aa11.67□□□□□ -0.54
PFDN5-213ENST00000550964 CYP46A1Q9Y6A2 500 aa11.67□□□□□ -0.54
PFDN5-213ENST00000550964 ABCB11O95342 1321 aa11.66□□□□□ -0.54
PFDN5-213ENST00000550964 RPTORQ8N122 1335 aa11.66□□□□□ -0.54
PFDN5-213ENST00000550964 PALM3A6NDB9 673 aaPredicted RBP11.66□□□□□ -0.54
PFDN5-213ENST00000550964 SH2B2O14492 632 aaPredicted RBP11.66□□□□□ -0.54
PFDN5-213ENST00000550964 TROAPQ12815 778 aa11.66□□□□□ -0.54
PFDN5-213ENST00000550964 STOX1Q6ZVD7 989 aa11.66□□□□□ -0.54
PFDN5-213ENST00000550964 ZNF654Q8IZM8 581 aa11.66□□□□□ -0.54
PFDN5-213ENST00000550964 TRERF1Q96PN7 1200 aa11.66□□□□□ -0.54
PFDN5-213ENST00000550964 AMNQ9BXJ7 453 aa11.66□□□□□ -0.54
PFDN5-213ENST00000550964 LY9Q9HBG7 655 aa11.66□□□□□ -0.54
PFDN5-213ENST00000550964 RAVER2Q9HCJ3 691 aaKnown RBP11.66□□□□□ -0.54
PFDN5-213ENST00000550964 RBM27Q9P2N5 1060 aaKnown RBP11.66□□□□□ -0.54
PFDN5-213ENST00000550964 SEC63Q9UGP8 760 aaKnown RBP11.66□□□□□ -0.54
PFDN5-213ENST00000550964 GABRQQ9UN88 632 aa11.66□□□□□ -0.54
PFDN5-213ENST00000550964 MRPL11Q9Y3B7 192 aaKnown RBP11.66□□□□□ -0.54
PFDN5-213ENST00000550964 FRMPD2Q68DX3 1309 aaPredicted RBP11.65□□□□□ -0.54
PFDN5-213ENST00000550964 ASB14A6NK59 587 aa11.65□□□□□ -0.54
PFDN5-213ENST00000550964 ZBTB5O15062 677 aa11.65□□□□□ -0.54
PFDN5-213ENST00000550964 INHAP05111 366 aa11.65□□□□□ -0.54
PFDN5-213ENST00000550964 GJB1P08034 283 aa11.65□□□□□ -0.54
PFDN5-213ENST00000550964 ALAS1P13196 640 aa11.65□□□□□ -0.54
PFDN5-213ENST00000550964 SLC4A3P48751 1232 aa11.65□□□□□ -0.54
PFDN5-213ENST00000550964 EXOSC10Q01780 885 aaKnown RBP11.65□□□□□ -0.54
PFDN5-213ENST00000550964 ANKRD1Q15327 319 aa11.65□□□□□ -0.54
PFDN5-213ENST00000550964 CCDC174Q6PII3 467 aa11.65□□□□□ -0.54
PFDN5-213ENST00000550964 FBXO11Q86XK2 927 aa11.65□□□□□ -0.54
PFDN5-213ENST00000550964 ADGRF4Q8IZF3 695 aa11.65□□□□□ -0.54
PFDN5-213ENST00000550964 NUP133Q8WUM0 1156 aa11.65□□□□□ -0.54
PFDN5-213ENST00000550964 JAKMIP1Q96N16 626 aaKnown RBP11.65□□□□□ -0.54
PFDN5-213ENST00000550964 RNF208Q9H0X6 261 aa11.65□□□□□ -0.54
PFDN5-213ENST00000550964 RNF146Q9NTX7 359 aa11.65□□□□□ -0.54
PFDN5-213ENST00000550964 CNPY2Q9Y2B0 182 aa11.65□□□□□ -0.54
PFDN5-213ENST00000550964 SNX14Q9Y5W7 946 aa11.65□□□□□ -0.54
PFDN5-213ENST00000550964 KIAA0100Q14667 2235 aaKnown RBP11.65□□□□□ -0.54
PFDN5-213ENST00000550964 SYNGAP1Q96PV0 1343 aa11.64□□□□□ -0.55
PFDN5-213ENST00000550964 POTEB2H3BUK9 544 aa11.64□□□□□ -0.55
PFDN5-213ENST00000550964 ZBTB43O43298 467 aa11.64□□□□□ -0.55
PFDN5-213ENST00000550964 ECM2O94769 699 aaPredicted RBP11.64□□□□□ -0.55
PFDN5-213ENST00000550964 CASTP20810 708 aaKnown RBP11.64□□□□□ -0.55
PFDN5-213ENST00000550964 SLC16A2P36021 539 aa11.64□□□□□ -0.55
PFDN5-213ENST00000550964 ANTXR2P58335 489 aa11.64□□□□□ -0.55
PFDN5-213ENST00000550964 CDC37Q16543 378 aaPredicted RBP11.64□□□□□ -0.55
PFDN5-213ENST00000550964 POTEEQ6S8J3 1075 aa11.64□□□□□ -0.55
PFDN5-213ENST00000550964 RUFY3Q7L099 469 aa11.64□□□□□ -0.55
PFDN5-213ENST00000550964 CHST3Q7LGC8 479 aa11.64□□□□□ -0.55
PFDN5-213ENST00000550964 ANKLE1Q8NAG6 615 aa11.64□□□□□ -0.55
PFDN5-213ENST00000550964 FANCBQ8NB91 859 aa11.64□□□□□ -0.55
PFDN5-213ENST00000550964 SH3TC2Q8TF17 1288 aa11.64□□□□□ -0.55
PFDN5-213ENST00000550964 RRP36Q96EU6 259 aaKnown RBP11.64□□□□□ -0.55
PFDN5-213ENST00000550964 SPZ1Q9BXG8 430 aa11.64□□□□□ -0.55
PFDN5-213ENST00000550964 RIOX1Q9H6W3 641 aa11.64□□□□□ -0.55
PFDN5-213ENST00000550964 PCDH10Q9P2E7 1040 aa11.64□□□□□ -0.55
PFDN5-213ENST00000550964 MAD2L2Q9UI95 211 aa11.64□□□□□ -0.55
PFDN5-213ENST00000550964 PNMA6FA0A0J9YX94 578 aa11.63□□□□□ -0.55
PFDN5-213ENST00000550964 hCG_1984214I3L0E3 225 aa11.63□□□□□ -0.55
PFDN5-213ENST00000550964 GOLGA8HP0CJ92 632 aa11.63□□□□□ -0.55
PFDN5-213ENST00000550964 CCL5P13501 91 aa11.63□□□□□ -0.55
PFDN5-213ENST00000550964 RPS6KB1P23443 525 aa11.63□□□□□ -0.55
PFDN5-213ENST00000550964 TTBK2Q6IQ55 1244 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms