RNA–Protein interactions for RNA: ENST00000550898.1

KRR1-204, Transcript of KRR1, small subunit processome component homolog, humanhuman

TSL 2

Gene KRR1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRR1-204ENST00000550898 NMIQ13287 307 aaPredicted RBP8.46□□□□□ -1.06
KRR1-204ENST00000550898 PABPC4Q13310 644 aaKnown RBP eCLIP8.46□□□□□ -1.06
KRR1-204ENST00000550898 CRHR2Q13324 411 aa8.46□□□□□ -1.06
KRR1-204ENST00000550898 RAB3GAP1Q15042 981 aa8.46□□□□□ -1.06
KRR1-204ENST00000550898 C6orf118Q5T5N4 469 aa8.46□□□□□ -1.06
KRR1-204ENST00000550898 COL13A1Q5TAT6 717 aaPredicted RBP8.46□□□□□ -1.06
KRR1-204ENST00000550898 CCDC129Q6ZRS4 1044 aa8.46□□□□□ -1.06
KRR1-204ENST00000550898 TMEM179Q6ZVK1 233 aa8.46□□□□□ -1.06
KRR1-204ENST00000550898 NPAS3Q8IXF0 933 aa8.46□□□□□ -1.06
KRR1-204ENST00000550898 IFNL3Q8IZI9 196 aa8.46□□□□□ -1.06
KRR1-204ENST00000550898 IRF7Q92985 503 aa8.46□□□□□ -1.06
KRR1-204ENST00000550898 DYNLL2Q96FJ2 89 aa8.46□□□□□ -1.06
KRR1-204ENST00000550898 FAM227BQ96M60 508 aa8.46□□□□□ -1.06
KRR1-204ENST00000550898 EPB41L4AQ9HCS5 686 aaPredicted RBP8.46□□□□□ -1.06
KRR1-204ENST00000550898 TMOD4Q9NZQ9 345 aa8.46□□□□□ -1.06
KRR1-204ENST00000550898 AGTPBP1Q9UPW5 1226 aa8.46□□□□□ -1.06
KRR1-204ENST00000550898 SLC45A1Q9Y2W3 748 aa8.46□□□□□ -1.06
KRR1-204ENST00000550898 CCDC171Q6TFL3 1326 aa8.46□□□□□ -1.06
KRR1-204ENST00000550898 ROBO3Q96MS0 1386 aa8.46□□□□□ -1.06
KRR1-204ENST00000550898 DDX60LQ5H9U9 1706 aaKnown RBP8.46□□□□□ -1.06
KRR1-204ENST00000550898 CYP2D7A0A087X1C5 515 aa8.45□□□□□ -1.06
KRR1-204ENST00000550898 C19orf81C9J6K1 198 aa8.45□□□□□ -1.06
KRR1-204ENST00000550898 FKTNO75072 461 aa8.45□□□□□ -1.06
KRR1-204ENST00000550898 CDK8P49336 464 aa8.45□□□□□ -1.06
KRR1-204ENST00000550898 USP14P54578 494 aa8.45□□□□□ -1.06
KRR1-204ENST00000550898 HMGCS2P54868 508 aa8.45□□□□□ -1.06
KRR1-204ENST00000550898 BACE1P56817 501 aa8.45□□□□□ -1.06
KRR1-204ENST00000550898 MOGSQ13724 837 aa8.45□□□□□ -1.06
KRR1-204ENST00000550898 ERICH6BQ5W0A0 696 aa8.45□□□□□ -1.06
KRR1-204ENST00000550898 TNS4Q8IZW8 715 aa8.45□□□□□ -1.06
KRR1-204ENST00000550898 SLC44A5Q8NCS7 719 aa8.45□□□□□ -1.06
KRR1-204ENST00000550898 ZNF296Q8WUU4 475 aaPredicted RBP8.45□□□□□ -1.06
KRR1-204ENST00000550898 SH2D4AQ9H788 454 aa8.45□□□□□ -1.06
KRR1-204ENST00000550898 MKNK2Q9HBH9 465 aa8.45□□□□□ -1.06
KRR1-204ENST00000550898 TLR2O60603 784 aa8.44□□□□□ -1.06
KRR1-204ENST00000550898 JAG1P78504 1218 aa8.44□□□□□ -1.06
KRR1-204ENST00000550898 SP3Q02447 781 aa8.44□□□□□ -1.06
KRR1-204ENST00000550898 ICA1Q05084 483 aa8.44□□□□□ -1.06
KRR1-204ENST00000550898 PDE4BQ07343 736 aa8.44□□□□□ -1.06
KRR1-204ENST00000550898 PPARAQ07869 468 aa8.44□□□□□ -1.06
KRR1-204ENST00000550898 ARHGEF6Q15052 776 aa8.44□□□□□ -1.06
KRR1-204ENST00000550898 AGERQ15109 404 aa8.44□□□□□ -1.06
KRR1-204ENST00000550898 SHROOM1Q2M3G4 852 aaPredicted RBP8.44□□□□□ -1.06
KRR1-204ENST00000550898 TUSC1Q2TAM9 212 aa8.44□□□□□ -1.06
KRR1-204ENST00000550898 GPAT2Q6NUI2 795 aa8.44□□□□□ -1.06
KRR1-204ENST00000550898 USP17L2Q6R6M4 530 aa8.44□□□□□ -1.06
KRR1-204ENST00000550898 CWC27Q6UX04 472 aaKnown RBP8.44□□□□□ -1.06
KRR1-204ENST00000550898 CTU1Q7Z7A3 348 aaKnown RBP8.44□□□□□ -1.06
KRR1-204ENST00000550898 ZNF589Q86UQ0 364 aaPredicted RBP8.44□□□□□ -1.06
KRR1-204ENST00000550898 ZSCAN1Q8NBB4 408 aa8.44□□□□□ -1.06
KRR1-204ENST00000550898 SMCR8Q8TEV9 937 aaPredicted RBP8.44□□□□□ -1.06
KRR1-204ENST00000550898 RUFY2Q8WXA3 655 aa8.44□□□□□ -1.06
KRR1-204ENST00000550898 ERO1AQ96HE7 468 aa8.44□□□□□ -1.06
KRR1-204ENST00000550898 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.44□□□□□ -1.06
KRR1-204ENST00000550898 KIAA1683Q9H0B3 1180 aa8.44□□□□□ -1.06
KRR1-204ENST00000550898 ARHGEF10LQ9HCE6 1279 aa8.44□□□□□ -1.06
KRR1-204ENST00000550898 ZMYM6O95789 1325 aa8.44□□□□□ -1.06
KRR1-204ENST00000550898 RAD50Q92878 1312 aa8.44□□□□□ -1.06
KRR1-204ENST00000550898 NAV1Q8NEY1 1877 aa8.44□□□□□ -1.06
KRR1-204ENST00000550898 PCNTO95613 3336 aa8.44□□□□□ -1.06
KRR1-204ENST00000550898 DOCK1Q14185 1865 aa8.43□□□□□ -1.06
KRR1-204ENST00000550898 HSPD1P10809 573 aaKnown RBP8.43□□□□□ -1.06
KRR1-204ENST00000550898 AKR1B1P15121 316 aa8.43□□□□□ -1.06
KRR1-204ENST00000550898 IRX3P78415 501 aaPredicted RBP8.43□□□□□ -1.06
KRR1-204ENST00000550898 KIF22Q14807 665 aa8.43□□□□□ -1.06
KRR1-204ENST00000550898 SEPT2Q15019 361 aa8.43□□□□□ -1.06
KRR1-204ENST00000550898 ALX1Q15699 326 aa8.43□□□□□ -1.06
KRR1-204ENST00000550898 ZYXQ15942 572 aaKnown RBP8.43□□□□□ -1.06
KRR1-204ENST00000550898 VPS53Q5VIR6 699 aa8.43□□□□□ -1.06
KRR1-204ENST00000550898 ZNF444Q8N0Y2 327 aaPredicted RBP8.43□□□□□ -1.06
KRR1-204ENST00000550898 STK11IPQ8N1F8 1099 aa8.43□□□□□ -1.06
KRR1-204ENST00000550898 C12orf42Q96LP6 360 aa8.43□□□□□ -1.06
KRR1-204ENST00000550898 R3HDMLQ9H3Y0 253 aa8.43□□□□□ -1.06
KRR1-204ENST00000550898 FOCADQ5VW36 1801 aa8.43□□□□□ -1.06
KRR1-204ENST00000550898 FOXP2O15409 715 aa8.42□□□□□ -1.06
KRR1-204ENST00000550898 CYP2C8P10632 490 aa8.42□□□□□ -1.06
KRR1-204ENST00000550898 PCP11498 1178 aaKnown RBP8.42□□□□□ -1.06
KRR1-204ENST00000550898 RASA1P20936 1047 aa8.42□□□□□ -1.06
KRR1-204ENST00000550898 FSHRP23945 695 aa8.42□□□□□ -1.06
KRR1-204ENST00000550898 GUCY1A2P33402 732 aa8.42□□□□□ -1.06
KRR1-204ENST00000550898 CTDSPL2Q05D32 466 aa8.42□□□□□ -1.06
KRR1-204ENST00000550898 NR5A1Q13285 461 aa8.42□□□□□ -1.06
KRR1-204ENST00000550898 DGKZQ13574 1117 aa8.42□□□□□ -1.06
KRR1-204ENST00000550898 PKN2Q16513 984 aaKnown RBP8.42□□□□□ -1.06
KRR1-204ENST00000550898 TREML2Q5T2D2 321 aa8.42□□□□□ -1.06
KRR1-204ENST00000550898 BPHLQ86WA6 291 aaPredicted RBP8.42□□□□□ -1.06
KRR1-204ENST00000550898 MEIOBQ8N635 442 aa8.42□□□□□ -1.06
KRR1-204ENST00000550898 GTF3C2Q8WUA4 911 aaPredicted RBP8.42□□□□□ -1.06
KRR1-204ENST00000550898 DSCC1Q9BVC3 393 aa8.42□□□□□ -1.06
KRR1-204ENST00000550898 KANSL2Q9H9L4 492 aa8.42□□□□□ -1.06
KRR1-204ENST00000550898 CPA4Q9UI42 421 aa8.42□□□□□ -1.06
KRR1-204ENST00000550898 DNMT3LQ9UJW3 386 aa8.42□□□□□ -1.06
KRR1-204ENST00000550898 ANAPC4Q9UJX5 808 aa8.42□□□□□ -1.06
KRR1-204ENST00000550898 SIPA1L1O43166 1804 aa8.42□□□□□ -1.06
KRR1-204ENST00000550898 MYO5AQ9Y4I1 1855 aaKnown RBP8.42□□□□□ -1.06
KRR1-204ENST00000550898 LAMB1P07942 1786 aa8.41□□□□□ -1.06
KRR1-204ENST00000550898 ADGRA2Q96PE1 1338 aa8.41□□□□□ -1.06
KRR1-204ENST00000550898 TSPY2A6NKD2 308 aa8.41□□□□□ -1.06
KRR1-204ENST00000550898 USP17L15C9J2P7 530 aa8.41□□□□□ -1.06
KRR1-204ENST00000550898 USP17L13C9JLJ4 530 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms