RNA–Protein interactions for RNA: ENST00000550620.1

PDE1B-207, Transcript of phosphodiesterase 1B, humanhuman

TSL 1 (best) BASIC

Gene PDE1B, Length 2,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-207ENST00000550620 GOLGA6BA6NDN3 693 aa16.81■□□□□ 0.28
PDE1B-207ENST00000550620 RHOBTB3O94955 611 aa16.81■□□□□ 0.28
PDE1B-207ENST00000550620 EVA1CP58658 441 aa16.81■□□□□ 0.28
PDE1B-207ENST00000550620 SECISBP2LQ93073 1101 aaKnown RBP16.81■□□□□ 0.28
PDE1B-207ENST00000550620 CCDC47Q96A33 483 aaKnown RBP16.81■□□□□ 0.28
PDE1B-207ENST00000550620 DHTKD1Q96HY7 919 aaPredicted RBP16.81■□□□□ 0.28
PDE1B-207ENST00000550620 PURBQ96QR8 312 aaKnown RBP16.81■□□□□ 0.28
PDE1B-207ENST00000550620 RIOK1Q9BRS2 568 aaKnown RBP16.81■□□□□ 0.28
PDE1B-207ENST00000550620 TTYH3Q9C0H2 523 aa16.81■□□□□ 0.28
PDE1B-207ENST00000550620 BICDL2A1A5D9 508 aa16.81■□□□□ 0.28
PDE1B-207ENST00000550620 GOLGA6CA6NDK9 693 aa16.81■□□□□ 0.28
PDE1B-207ENST00000550620 GOLGA6DP0CG33 693 aa16.81■□□□□ 0.28
PDE1B-207ENST00000550620 PPP1R2P41236 205 aa16.81■□□□□ 0.28
PDE1B-207ENST00000550620 CDK17Q00537 523 aa16.81■□□□□ 0.28
PDE1B-207ENST00000550620 DTHD1Q6ZMT9 781 aa16.81■□□□□ 0.28
PDE1B-207ENST00000550620 GIMAP8Q8ND71 665 aaPredicted RBP16.81■□□□□ 0.28
PDE1B-207ENST00000550620 TRIM58Q8NG06 486 aa16.81■□□□□ 0.28
PDE1B-207ENST00000550620 TUBGCP2Q9BSJ2 902 aa16.81■□□□□ 0.28
PDE1B-207ENST00000550620 GOLGA6AQ9NYA3 693 aa16.81■□□□□ 0.28
PDE1B-207ENST00000550620 B4DLN1 442 aa16.8■□□□□ 0.28
PDE1B-207ENST00000550620 VAV2P52735 878 aa16.8■□□□□ 0.28
PDE1B-207ENST00000550620 PMS1P54277 932 aaKnown RBP16.8■□□□□ 0.28
PDE1B-207ENST00000550620 ITIH3Q06033 890 aa16.8■□□□□ 0.28
PDE1B-207ENST00000550620 SPA17Q15506 151 aa16.8■□□□□ 0.28
PDE1B-207ENST00000550620 GBP6Q6ZN66 633 aa16.8■□□□□ 0.28
PDE1B-207ENST00000550620 MMGT1Q8N4V1 131 aa16.8■□□□□ 0.28
PDE1B-207ENST00000550620 C4orf32Q8N8J7 132 aa16.8■□□□□ 0.28
PDE1B-207ENST00000550620 MYH8P13535 1937 aa16.8■□□□□ 0.28
PDE1B-207ENST00000550620 A0A087WUV0 522 aaPredicted RBP16.79■□□□□ 0.28
PDE1B-207ENST00000550620 A0A1W2PQJ5 194 aa16.79■□□□□ 0.28
PDE1B-207ENST00000550620 NUTM2BA6NNL0 878 aaPredicted RBP16.79■□□□□ 0.28
PDE1B-207ENST00000550620 NUTM2EB1AL46 878 aaPredicted RBP16.79■□□□□ 0.28
PDE1B-207ENST00000550620 USO1O60763 962 aaKnown RBP16.79■□□□□ 0.28
PDE1B-207ENST00000550620 CPP00450 1065 aa16.79■□□□□ 0.28
PDE1B-207ENST00000550620 KIF5BP33176 963 aa16.79■□□□□ 0.28
PDE1B-207ENST00000550620 SF3B2Q13435 895 aaKnown RBP16.79■□□□□ 0.28
PDE1B-207ENST00000550620 FIGNQ5HY92 759 aa16.79■□□□□ 0.28
PDE1B-207ENST00000550620 ICE2Q659A1 982 aa16.79■□□□□ 0.28
PDE1B-207ENST00000550620 TTI2Q6NXR4 508 aa16.79■□□□□ 0.28
PDE1B-207ENST00000550620 BLIDQ8IZY5 108 aa16.79■□□□□ 0.28
PDE1B-207ENST00000550620 CSGALNACT2Q8N6G5 542 aa16.79■□□□□ 0.28
PDE1B-207ENST00000550620 PCMTD1Q96MG8 357 aaPredicted RBP16.79■□□□□ 0.28
PDE1B-207ENST00000550620 MAGEF1Q9HAY2 307 aa16.79■□□□□ 0.28
PDE1B-207ENST00000550620 SH3GLB2Q9NR46 395 aa16.79■□□□□ 0.28
PDE1B-207ENST00000550620 JRKLQ9Y4A0 524 aa16.79■□□□□ 0.28
PDE1B-207ENST00000550620 GOLGA8KD6RF30 607 aa16.79■□□□□ 0.28
PDE1B-207ENST00000550620 TACC1O75410 805 aa16.79■□□□□ 0.28
PDE1B-207ENST00000550620 UBA7P41226 1012 aa16.79■□□□□ 0.28
PDE1B-207ENST00000550620 TBC1D8BQ0IIM8 1120 aa16.79■□□□□ 0.28
PDE1B-207ENST00000550620 PPFIA1Q13136 1202 aa16.79■□□□□ 0.28
PDE1B-207ENST00000550620 TMED8Q6PL24 325 aaPredicted RBP16.79■□□□□ 0.28
PDE1B-207ENST00000550620 PACS2Q86VP3 889 aa16.79■□□□□ 0.28
PDE1B-207ENST00000550620 AENQ8WTP8 325 aaKnown RBP16.79■□□□□ 0.28
PDE1B-207ENST00000550620 RIN2Q8WYP3 895 aaPredicted RBP16.79■□□□□ 0.28
PDE1B-207ENST00000550620 LACRTQ9GZZ8 138 aa16.79■□□□□ 0.28
PDE1B-207ENST00000550620 CUEDC2Q9H467 287 aa16.79■□□□□ 0.28
PDE1B-207ENST00000550620 TFR2Q9UP52 801 aa16.79■□□□□ 0.28
PDE1B-207ENST00000550620 AGPSO00116 658 aa16.78■□□□□ 0.28
PDE1B-207ENST00000550620 ORC4O43929 436 aa16.78■□□□□ 0.28
PDE1B-207ENST00000550620 ZMYND10O75800 440 aa16.78■□□□□ 0.28
PDE1B-207ENST00000550620 CHRNDQ07001 517 aa16.78■□□□□ 0.28
PDE1B-207ENST00000550620 ZNF572Q7Z3I7 529 aaPredicted RBP16.78■□□□□ 0.28
PDE1B-207ENST00000550620 AGPAT5Q9NUQ2 364 aa16.78■□□□□ 0.28
PDE1B-207ENST00000550620 SNX12Q9UMY4 172 aa16.78■□□□□ 0.28
PDE1B-207ENST00000550620 MACROD2A1Z1Q3 448 aa16.78■□□□□ 0.28
PDE1B-207ENST00000550620 KLRC4O43908 158 aa16.78■□□□□ 0.28
PDE1B-207ENST00000550620 OPA1O60313 960 aa16.78■□□□□ 0.28
PDE1B-207ENST00000550620 PRLRP16471 622 aa16.78■□□□□ 0.28
PDE1B-207ENST00000550620 C2orf54Q08AI8 447 aa16.78■□□□□ 0.28
PDE1B-207ENST00000550620 NAALADL2Q58DX5 795 aa16.78■□□□□ 0.28
PDE1B-207ENST00000550620 FKBP15Q5T1M5 1219 aa16.78■□□□□ 0.28
PDE1B-207ENST00000550620 SUSD4Q5VX71 490 aa16.78■□□□□ 0.28
PDE1B-207ENST00000550620 TADA2BQ86TJ2 420 aa16.78■□□□□ 0.28
PDE1B-207ENST00000550620 CCDC42Q96M95 316 aa16.78■□□□□ 0.28
PDE1B-207ENST00000550620 GDAP1L1Q96MZ0 367 aa16.78■□□□□ 0.28
PDE1B-207ENST00000550620 CCSER1Q9C0I3 900 aa16.78■□□□□ 0.28
PDE1B-207ENST00000550620 PLEKHA4Q9H4M7 779 aa16.78■□□□□ 0.28
PDE1B-207ENST00000550620 KBTBD4Q9NVX7 518 aa16.78■□□□□ 0.28
PDE1B-207ENST00000550620 PCDHA4Q9UN74 947 aa16.78■□□□□ 0.28
PDE1B-207ENST00000550620 CYP2D7A0A087X1C5 515 aa16.77■□□□□ 0.28
PDE1B-207ENST00000550620 RCCD1A6NED2 376 aa16.77■□□□□ 0.28
PDE1B-207ENST00000550620 A6NNZ2 444 aa16.77■□□□□ 0.28
PDE1B-207ENST00000550620 SMIM22K7EJ46 135 aa16.77■□□□□ 0.28
PDE1B-207ENST00000550620 PDE2AO00408 941 aaPredicted RBP16.77■□□□□ 0.28
PDE1B-207ENST00000550620 LAD1O00515 517 aa16.77■□□□□ 0.28
PDE1B-207ENST00000550620 ZNF185O15231 689 aa16.77■□□□□ 0.28
PDE1B-207ENST00000550620 MYBL2P10244 700 aa16.77■□□□□ 0.28
PDE1B-207ENST00000550620 CCNE1P24864 410 aa16.77■□□□□ 0.28
PDE1B-207ENST00000550620 TUBB8Q3ZCM7 444 aa16.77■□□□□ 0.28
PDE1B-207ENST00000550620 GSPT2Q8IYD1 628 aaKnown RBP16.77■□□□□ 0.28
PDE1B-207ENST00000550620 P2RX5Q93086 422 aa16.77■□□□□ 0.28
PDE1B-207ENST00000550620 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.77■□□□□ 0.28
PDE1B-207ENST00000550620 ZNF804BA4D1E1 1349 aa16.77■□□□□ 0.28
PDE1B-207ENST00000550620 CCDC194A0A1B0GVG4 234 aa16.77■□□□□ 0.27
PDE1B-207ENST00000550620 MTIF2P46199 727 aaKnown RBP16.77■□□□□ 0.27
PDE1B-207ENST00000550620 DYNLL1P63167 89 aaKnown RBP16.77■□□□□ 0.27
PDE1B-207ENST00000550620 CCDC96Q2M329 555 aa16.77■□□□□ 0.27
PDE1B-207ENST00000550620 CNOT6LQ96LI5 555 aaKnown RBP16.77■□□□□ 0.27
PDE1B-207ENST00000550620 CAPS2Q9BXY5 557 aa16.77■□□□□ 0.27
PDE1B-207ENST00000550620 SHTN1A0MZ66 631 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms