RNA–Protein interactions for RNA: ENST00000550457.1

CCNT1-203, Transcript of cyclin T1, humanhuman

TSL 3

Gene CCNT1, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-203ENST00000550457 NUDT19A8MXV4 375 aa4.81□□□□□ -1.64
CCNT1-203ENST00000550457 VAV1P15498 845 aa4.81□□□□□ -1.64
CCNT1-203ENST00000550457 NME1P15531 152 aaKnown RBP4.81□□□□□ -1.64
CCNT1-203ENST00000550457 CCNFP41002 786 aa4.81□□□□□ -1.64
CCNT1-203ENST00000550457 NFKB2Q00653 900 aa4.81□□□□□ -1.64
CCNT1-203ENST00000550457 LAPTM5Q13571 262 aa4.81□□□□□ -1.64
CCNT1-203ENST00000550457 CBX2Q14781 532 aaPredicted RBP4.81□□□□□ -1.64
CCNT1-203ENST00000550457 RTP2Q5QGT7 225 aa4.81□□□□□ -1.64
CCNT1-203ENST00000550457 OLFML2BQ68BL8 750 aa4.81□□□□□ -1.64
CCNT1-203ENST00000550457 RPTNQ6XPR3 784 aa4.81□□□□□ -1.64
CCNT1-203ENST00000550457 NUP43Q8NFH3 380 aa4.81□□□□□ -1.64
CCNT1-203ENST00000550457 PWWP2AQ96N64 755 aa4.81□□□□□ -1.64
CCNT1-203ENST00000550457 SLC6A18Q96N87 628 aa4.81□□□□□ -1.64
CCNT1-203ENST00000550457 MKRN2Q9H000 416 aaKnown RBP4.81□□□□□ -1.64
CCNT1-203ENST00000550457 ADAM7Q9H2U9 754 aa4.81□□□□□ -1.64
CCNT1-203ENST00000550457 AP5S1Q9NUS5 200 aa4.81□□□□□ -1.64
CCNT1-203ENST00000550457 A0A1W2PQ45 241 aaPredicted RBP4.8□□□□□ -1.64
CCNT1-203ENST00000550457 A0A1W2PQY0 241 aa4.8□□□□□ -1.64
CCNT1-203ENST00000550457 MEIS3P2A8K0S8 358 aa4.8□□□□□ -1.64
CCNT1-203ENST00000550457 TNFRSF10CO14798 259 aa4.8□□□□□ -1.64
CCNT1-203ENST00000550457 SHOXO15266 292 aa4.8□□□□□ -1.64
CCNT1-203ENST00000550457 MSL3P1P0C860 447 aa4.8□□□□□ -1.64
CCNT1-203ENST00000550457 ARL4AP40617 200 aa4.8□□□□□ -1.64
CCNT1-203ENST00000550457 CYP4F8P98187 520 aa4.8□□□□□ -1.64
CCNT1-203ENST00000550457 AUHQ13825 339 aaKnown RBP4.8□□□□□ -1.64
CCNT1-203ENST00000550457 PLEKHN1Q494U1 663 aaPredicted RBP4.8□□□□□ -1.64
CCNT1-203ENST00000550457 REXO1Q8N1G1 1221 aaKnown RBP4.8□□□□□ -1.64
CCNT1-203ENST00000550457 SLC9A7Q96T83 725 aa4.8□□□□□ -1.64
CCNT1-203ENST00000550457 IMPACTQ9P2X3 320 aa4.8□□□□□ -1.64
CCNT1-203ENST00000550457 PCDHB12Q9Y5F1 795 aa4.8□□□□□ -1.64
CCNT1-203ENST00000550457 FFAR3O14843 346 aa4.79□□□□□ -1.64
CCNT1-203ENST00000550457 IGFBP6P24592 240 aaPredicted RBP4.79□□□□□ -1.64
CCNT1-203ENST00000550457 MVKQ03426 396 aa4.79□□□□□ -1.64
CCNT1-203ENST00000550457 APOBRQ0VD83 1088 aa4.79□□□□□ -1.64
CCNT1-203ENST00000550457 PRRT2Q7Z6L0 340 aaPredicted RBP4.79□□□□□ -1.64
CCNT1-203ENST00000550457 SP8Q8IXZ3 490 aa4.79□□□□□ -1.64
CCNT1-203ENST00000550457 LINC01356Q8N9X3 169 aa4.79□□□□□ -1.64
CCNT1-203ENST00000550457 KRTAP9-8Q9BYQ0 159 aa4.79□□□□□ -1.64
CCNT1-203ENST00000550457 LUC7LQ9NQ29 371 aaKnown RBP4.79□□□□□ -1.64
CCNT1-203ENST00000550457 GGT7Q9UJ14 662 aa4.79□□□□□ -1.64
CCNT1-203ENST00000550457 FBXL21Q9UKT6 434 aa4.79□□□□□ -1.64
CCNT1-203ENST00000550457 PLA2G2DQ9UNK4 145 aa4.79□□□□□ -1.64
CCNT1-203ENST00000550457 IRS2Q9Y4H2 1338 aa4.78□□□□□ -1.64
CCNT1-203ENST00000550457 FAM86C2PA6NEL3 165 aa4.78□□□□□ -1.64
CCNT1-203ENST00000550457 C9IYK1 514 aa4.78□□□□□ -1.64
CCNT1-203ENST00000550457 BUB1BO60566 1050 aaPredicted RBP4.78□□□□□ -1.64
CCNT1-203ENST00000550457 CELA3BP08861 270 aa4.78□□□□□ -1.64
CCNT1-203ENST00000550457 ACRP10323 421 aa4.78□□□□□ -1.64
CCNT1-203ENST00000550457 ENDOUP21128 410 aaKnown RBP4.78□□□□□ -1.64
CCNT1-203ENST00000550457 MCM4P33991 863 aa4.78□□□□□ -1.64
CCNT1-203ENST00000550457 LIMS1P48059 325 aa4.78□□□□□ -1.64
CCNT1-203ENST00000550457 ZNF200P98182 395 aaPredicted RBP4.78□□□□□ -1.64
CCNT1-203ENST00000550457 GGNQ86UU5 652 aa4.78□□□□□ -1.64
CCNT1-203ENST00000550457 SLC12A9Q9BXP2 914 aa4.78□□□□□ -1.64
CCNT1-203ENST00000550457 HCFC2Q9Y5Z7 792 aa4.78□□□□□ -1.64
CCNT1-203ENST00000550457 FBLN1P23142 703 aa4.77□□□□□ -1.65
CCNT1-203ENST00000550457 MAPKAPK2P49137 400 aa4.77□□□□□ -1.65
CCNT1-203ENST00000550457 TMEM62Q0P6H9 643 aa4.77□□□□□ -1.65
CCNT1-203ENST00000550457 LRRFIP1Q32MZ4 808 aaKnown RBP4.77□□□□□ -1.65
CCNT1-203ENST00000550457 SLITRK4Q8IW52 837 aa4.77□□□□□ -1.65
CCNT1-203ENST00000550457 TEPSINQ96N21 525 aa4.77□□□□□ -1.65
CCNT1-203ENST00000550457 PRR13Q9NZ81 148 aa4.77□□□□□ -1.65
CCNT1-203ENST00000550457 SUCOQ9UBS9 1254 aaKnown RBP4.77□□□□□ -1.65
CCNT1-203ENST00000550457 ZC3H12DA2A288 527 aaKnown RBP4.76□□□□□ -1.65
CCNT1-203ENST00000550457 H0Y8X5 98 aa4.76□□□□□ -1.65
CCNT1-203ENST00000550457 GSNP06396 782 aa4.76□□□□□ -1.65
CCNT1-203ENST00000550457 GSTM1P09488 218 aa4.76□□□□□ -1.65
CCNT1-203ENST00000550457 ZNF165P49910 485 aa4.76□□□□□ -1.65
CCNT1-203ENST00000550457 MRPL58Q14197 206 aaKnown RBP4.76□□□□□ -1.65
CCNT1-203ENST00000550457 DBX2Q6ZNG2 339 aa4.76□□□□□ -1.65
CCNT1-203ENST00000550457 HS2ST1Q7LGA3 356 aa4.76□□□□□ -1.65
CCNT1-203ENST00000550457 FRMD5Q7Z6J6 570 aa4.76□□□□□ -1.65
CCNT1-203ENST00000550457 C7orf61Q8IZ16 206 aa4.76□□□□□ -1.65
CCNT1-203ENST00000550457 ADGRG2Q8IZP9 1017 aa4.76□□□□□ -1.65
CCNT1-203ENST00000550457 EAF1Q96JC9 268 aaPredicted RBP4.76□□□□□ -1.65
CCNT1-203ENST00000550457 NT5C1AQ9BXI3 368 aa4.76□□□□□ -1.65
CCNT1-203ENST00000550457 A0A1B0GTL3 188 aa4.75□□□□□ -1.65
CCNT1-203ENST00000550457 PRICKLE3O43900 615 aaPredicted RBP4.75□□□□□ -1.65
CCNT1-203ENST00000550457 PLA2G1BP04054 148 aaKnown RBP4.75□□□□□ -1.65
CCNT1-203ENST00000550457 DBHP09172 617 aa4.75□□□□□ -1.65
CCNT1-203ENST00000550457 SLURP1P55000 103 aa4.75□□□□□ -1.65
CCNT1-203ENST00000550457 NR1I3Q14994 352 aa4.75□□□□□ -1.65
CCNT1-203ENST00000550457 VWA3BQ502W6 1294 aa4.75□□□□□ -1.65
CCNT1-203ENST00000550457 TDRD10Q5VZ19 366 aaKnown RBP4.75□□□□□ -1.65
CCNT1-203ENST00000550457 ZC3H14Q6PJT7 736 aaKnown RBP4.75□□□□□ -1.65
CCNT1-203ENST00000550457 PPFIBP1Q86W92 1011 aa4.75□□□□□ -1.65
CCNT1-203ENST00000550457 NKD1Q969G9 470 aa4.75□□□□□ -1.65
CCNT1-203ENST00000550457 SRRTQ9BXP5 876 aaKnown RBP4.75□□□□□ -1.65
CCNT1-203ENST00000550457 ATF2P15336 505 aa4.74□□□□□ -1.65
CCNT1-203ENST00000550457 ITGAEP38570 1179 aa4.74□□□□□ -1.65
CCNT1-203ENST00000550457 PMS1P54277 932 aaKnown RBP4.74□□□□□ -1.65
CCNT1-203ENST00000550457 ZNF445P59923 1031 aa4.74□□□□□ -1.65
CCNT1-203ENST00000550457 CAP1Q01518 475 aa4.74□□□□□ -1.65
CCNT1-203ENST00000550457 EFEMP1Q12805 493 aa4.74□□□□□ -1.65
CCNT1-203ENST00000550457 RTP5Q14D33 572 aa4.74□□□□□ -1.65
CCNT1-203ENST00000550457 AXDND1Q5T1B0 1012 aaPredicted RBP4.74□□□□□ -1.65
CCNT1-203ENST00000550457 LDLRAD1Q5T700 205 aa4.74□□□□□ -1.65
CCNT1-203ENST00000550457 DCAF15Q66K64 600 aa4.74□□□□□ -1.65
CCNT1-203ENST00000550457 INTS3Q68E01 1043 aaKnown RBP4.74□□□□□ -1.65
CCNT1-203ENST00000550457 CCDC144CPQ8IYA2 1237 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms